arb_tree_32
Software
·
OSTI ID:1329177
- Argonne National Laboratory
The purpose of this program is to generate probes specific for the group of sequences that belong to a given phylogenetic node. For each node of the input tree, this program selects probes that are positive for all sequences that belong to this node and negative for all that doesn't. The program uses condensed tree for probe representation to save computer memory. As a result of calculation, the program prints lists for each node from the tree. Input file formats: FASTA for sequence database and ARB tree for phylogenetic organization of nodes. Output file format: text file.
- Short Name / Acronym:
- arb_tree_32; 004986IBMPC00
- Site Accession Number:
- ANL-SF-07-046
- Version:
- 00
- Programming Language(s):
- Medium: X; OS: Windows 2000 XP
- Research Organization:
- Argonne National Laboratory (ANL), Argonne, IL (United States)
- Sponsoring Organization:
- USDOE Office of Science (SC), Basic Energy Sciences (BES)
- Contributing Organization:
- Argonne National Laboratory
- DOE Contract Number:
- AC02-06CH11357
- OSTI ID:
- 1329177
- Country of Origin:
- United States
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