skip to main content
OSTI.GOV title logo U.S. Department of Energy
Office of Scientific and Technical Information

Title: An observational constraint on stomatal function in forests: evaluating coupled carbon and water vapor exchange with carbon isotopes in the Community Land Model (CLM4.5)

Journal Article · · Biogeosciences (Online)

Land surface models are useful tools to quantify contemporary and future climate impact on terrestrial carbon cycle processes, provided they can be appropriately constrained and tested with observations. Stable carbon isotopes of CO2 offer the potential to improve model representation of the coupled carbon and water cycles because they are strongly influenced by stomatal function. Recently, a representation of stable carbon isotope discrimination was incorporated into the Community Land Model component of the Community Earth System Model. Here, we tested the model's capability to simulate whole-forest isotope discrimination in a subalpine conifer forest at Niwot Ridge, Colorado, USA. We distinguished between isotopic behavior in response to a decrease of δ13C within atmospheric CO2 (Suess effect) vs. photosynthetic discrimination (Δcanopy), by creating a site-customized atmospheric CO2 and δ13C of CO2 time series. We implemented a seasonally varying Vcmax model calibration that best matched site observations of net CO2 carbon exchange, latent heat exchange, and biomass. The model accurately simulated observed δ13C of needle and stem tissue, but underestimated the δ13C of bulk soil carbon by 1–2 ‰. The model overestimated the multiyear (2006–2012) average Δcanopy relative to prior data-based estimates by 2–4 ‰. The amplitude of the average seasonal cycle of Δcanopy (i.e., higher in spring/fall as compared to summer) was correctly modeled but only when using a revised, fully coupled An-gs (net assimilation rate, stomatal conductance) version of the model in contrast to the partially coupled An-gs version used in the default model. The model attributed most of the seasonal variation in discrimination to Asub>n, whereas interannual variation in simulated Δcanopy during the summer months was driven by stomatal response to vapor pressure deficit (VPD). The model simulated a 10 % increase in both photosynthetic discrimination and water-use efficiency (WUE) since 1850 which is counter to established relationships between discrimination and WUE. The isotope observations used here to constrain CLM suggest (1) the model overestimated stomatal conductance and (2) the default CLM approach to representing nitrogen limitation (partially coupled model) was not capable of reproducing observed trends in discrimination. These findings demonstrate that isotope observations can provide important information related to stomatal function driven by environmental stress from VPD and nitrogen limitation. Future versions of CLM that incorporate carbon isotope discrimination are likely to benefit from explicit inclusion of mesophyll conductance.

Research Organization:
Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States); Univ. of Utah, Salt Lake City, UT (United States)
Sponsoring Organization:
USDOE Office of Science (SC), Biological and Environmental Research (BER)
Grant/Contract Number:
SC0010625; AC02-05CH11231
OSTI ID:
1328465
Alternate ID(s):
OSTI ID: 1377494; OSTI ID: 1425449; OSTI ID: 1425450; OSTI ID: 1425451
Journal Information:
Biogeosciences (Online), Journal Name: Biogeosciences (Online) Vol. 13 Journal Issue: 18; ISSN 1726-4189
Publisher:
Copernicus Publications, EGUCopyright Statement
Country of Publication:
Germany
Language:
English
Citation Metrics:
Cited by: 31 works
Citation information provided by
Web of Science

References (77)

Forest water use and water use efficiency at elevated CO 2 : a model-data intercomparison at two contrasting temperate forest FACE sites journal March 2013
Carbon isotope discrimination indicates improving water-use efficiency of trees in northern Eurasia over the last 100 years journal December 2004
Pulse-labelling trees to study carbon allocation dynamics: a review of methods, current knowledge and future prospects journal June 2012
Photosynthetic carbon isotope discrimination and its relationship to the carbon isotope signals of stem, soil and ecosystem respiration journal July 2010
Modelling assimilation and intercellular CO2 from measured conductance: a synthesis of approaches journal December 2000
Increased water-use efficiency during the 20th century did not translate into enhanced tree growth: Tree growth in the 20th century journal November 2010
Influence of carbon-nitrogen cycle coupling on land model response to CO 2 fertilization and climate variability : INFLUENCE OF CARBON-NITROGEN COUPLING journal December 2007
Seasonal pattern of regional carbon balance in the central Rocky Mountains from surface and airborne measurements journal January 2011
Novel applications of carbon isotopes in atmospheric CO 2 : what can atmospheric measurements teach us about processes in the biosphere? journal January 2011
Longer growing seasons lead to less carbon sequestration by a subalpine forest journal February 2010
Analysis of Factors Controlling Soil Organic Matter Levels in Great Plains Grasslands1 journal January 1987
On the Relationship Between Carbon Isotope Discrimination and the Intercellular Carbon Dioxide Concentration in Leaves journal January 1982
Spatial variability and temporal trends in water-use efficiency of European forests journal September 2014
Carbon sequestration studied in western U.S. mountains journal January 2002
A Bayesian calibration of a simple carbon cycle model: The role of observations in estimating and reducing uncertainty: BAYESIAN CARBON CYCLE MODEL CALIBRATION journal June 2008
Water-use efficiency and transpiration across European forests during the Anthropocene journal May 2015
What have we learned from 15 years of free-air CO2 enrichment (FACE)? A meta-analytic review of the responses of photosynthesis, canopy properties and plant production to rising CO2: Tansley review journal November 2004
High temporal resolution tracing of photosynthate carbon from the tree canopy to forest soil microorganisms journal October 2007
A revised 1000 year atmospheric δ 13 C-CO 2 record from Law Dome and South Pole, Antarctica : 1000 YEARS OF ATMOSPHERIC journal August 2013
An improved isotopic method for partitioning net ecosystem–atmosphere CO2 exchange journal December 2015
Measuring and modeling ecosystem photosynthesis and the carbon isotope composition of ecosystem-respired CO2 in three boreal coniferous forests journal February 2012
Canopy uptake of atmospheric N deposition at a conifer forest: Part II- response of chlorophyll fluorescence and gas exchange parameters journal January 2007
Improving the Numerical Solution of Soil Moisture–Based Richards Equation for Land Models with a Deep or Shallow Water Table journal February 2009
Stable carbon isotope ratio of tree leaves, boles and fine litter in a tropical forest in Rondônia, Brazil journal April 1998
Environmental and physiological determinants of carbon isotope discrimination in terrestrial plants journal July 2013
Sensitivity of plants to changing atmospheric CO 2 concentration: from the geological past to the next century journal January 2013
Carbon isotopes in terrestrial ecosystem pools and CO 2 fluxes journal April 2008
Photosynthetic capacity and light harvesting efficiency during the winter-to-spring transition in subalpine conifers journal October 2006
Soil carbon stocks in experimental mesocosms are dependent on the rate of labile carbon, nitrogen and phosphorus inputs to soils journal December 2008
Carbon sequestration in a high-elevation, subalpine forest journal May 2002
Ecological processes dominate the 13 C land disequilibrium in a Rocky Mountain subalpine forest : Niwot Ridge 13C land disequilibrium journal April 2014
Increase in forest water-use efficiency as atmospheric carbon dioxide concentrations rise journal July 2013
Tree-ring δ 13 C tracks flux tower ecosystem productivity estimates in a NE temperate forest journal July 2014
Biosphere model simulations of interannual variability in terrestrial 13 C/ 12 C exchange : TERRESTRIAL journal July 2013
Carbon Isotope Ratios in Belowground Carbon Cycle Processes journal April 2000
A critical appraisal of a combined stomatal-photosynthesis model for C3 plants journal April 1995
Spatial and temporal controls of soil respiration rate in a high-elevation, subalpine forest journal April 2003
A 1000-year high precision record of δ 13 C in atmospheric CO 2 journal January 1999
Evaluating the Community Land Model in a pine stand with shading manipulations and 13 CO 2 labeling journal January 2016
Growth, carbon-isotope discrimination, and drought-associated mortality across a Pinus ponderosa elevational transect: CHRONIC WATER STRESS AND PONDEROSA PINE MORTALITY journal January 2010
Carbon allocation and carbon isotope fluxes in the plant-soil-atmosphere continuum: a review journal January 2011
Physiological and environmental regulation of stomatal conductance, photosynthesis and transpiration: a model that includes a laminar boundary layer journal April 1991
Monitoring the isotopic composition of atmospheric CO 2 : Measurements from the NOAA Global Air Sampling Network journal November 1996
Combining meteorology, eddy fluxes, isotope measurements, and modeling to understand environmental controls of carbon isotope discrimination at the canopy scale journal April 2006
Tobacco aquaporin NtAQP1 is involved in mesophyll conductance to CO 2 in vivo journal November 2006
Simulations show decreasing carbon stocks and potential for carbon emissions in Rocky Mountain forests over the next century journal July 2010
The effects of elevated CO2 and nitrogen fertilization on stomatal conductance estimated from 11 years of scaled sap flux measurements at Duke FACE journal December 2012
Evaluation of 11 terrestrial carbon-nitrogen cycle models against observations from two temperate Free-Air CO 2 Enrichment studies journal January 2014
Carbon–Concentration and Carbon–Climate Feedbacks in CMIP5 Earth System Models journal August 2013
Climate and interannual variability of the atmosphere-biosphere 13 CO 2 flux : ATMOSPHERE-BIOSPHERE journal January 2003
Modeling and measuring the effects of disturbance history and climate on carbon and water budgets in evergreen needleleaf forests journal December 2002
Mesophyll conductance to CO 2 : current knowledge and future prospects journal May 2008
Mountain Pine Beetle Develops an Unprecedented Summer Generation in Response to Climate Warming journal May 2012
Representing leaf and root physiological traits in CLM improves global carbon and nitrogen cycling predictions: LEAF AND ROOT TRAITS IN CLM journal May 2016
ForCent model development and testing using the Enriched Background Isotope Study experiment journal January 2010
Photosynthesis, carbohydrate levels and chlorophyll fluorescence-estimated intercellular CO2 in water-stressed Casuarina equisetifolia Forst. & Forst. journal July 1999
Climatic influences on net ecosystem CO2 exchange during the transition from wintertime carbon source to springtime carbon sink in a high-elevation, subalpine forest journal August 2005
On the separation of net ecosystem exchange into assimilation and ecosystem respiration: review and improved algorithm journal September 2005
Climate–Carbon Cycle Feedback Analysis: Results from the C 4 MIP Model Intercomparison journal July 2006
Ecosystem model spin-up: Estimating steady state conditions in a coupled terrestrial carbon and nitrogen cycle model journal November 2005
Apparent seasonal cycle in isotopic discrimination of carbon in the atmosphere and biosphere due to vapor pressure deficit: SEASONAL ISOTOPIC DISCRIMINATION OF CO2 journal September 2010
Separation of net ecosystem exchange into assimilation and respiration using a light response curve approach: critical issues and global evaluation: SEPARATION OF NEE INTO GPP AND RECO journal January 2010
Fluorescence Parameters Measured Concurrently with Net Photosynthesis to Investigate Chloroplastic CO2 Concentration in Leaves of Quercus ilex L. journal August 1990
Carbon isotopes and water use efficiency: sense and sensitivity journal January 2008
Variation in water potential, hydraulic characteristics and water source use in montane Douglas-fir and lodgepole pine trees in southwestern Alberta and consequences for seasonal changes in photosynthetic capacity journal February 2012
Carbon 13 exchanges between the atmosphere and biosphere journal December 1997
Relationship between temperature and the seasonal course of photosynthesis in Scots pine at northern timberline and in southern boreal zone journal January 2007
Optimal stomatal behaviour around the world journal March 2015
Global carbon budget 2014 journal January 2015
Long-term field performance of a tunable diode laser absorption spectrometer for analysis of carbon isotopes of CO 2 in forest air journal January 2008
Estimating parameters of a forest ecosystem C model with measurements of stocks and fluxes as joint constraints journal April 2010
Estimating diurnal to annual ecosystem parameters by synthesis of a carbon flux model with eddy covariance net ecosystem exchange observations journal February 2005
Summer precipitation influences the stable oxygen and carbon isotopic composition of tree-ring cellulose in Pinus ponderosa journal April 2007
A biochemical model of photosynthetic CO2 assimilation in leaves of C3 species journal June 1980
Mechanistic scaling of ecosystem function and dynamics in space and time: Ecosystem Demography model version 2 journal January 2009
Carbon Isotope Discrimination and Photosynthesis journal June 1989
Parameter and prediction uncertainty in an optimized terrestrial carbon cycle model: Effects of constraining variables and data record length journal January 2011