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Title: Crystal structure of Bacillus anthracis virulence regulator AtxA and effects of phosphorylated histidines on multimerization and activity

Journal Article · · Molecular Microbiology
DOI:https://doi.org/10.1111/mmi.12867· OSTI ID:1280877
 [1];  [1];  [1];  [2];  [2];  [1]
  1. Univ. of Texas Health Science Center at Houston, Houston, TX (United States). Dept. of Microbiology and Molecular Genetics
  2. Argonne National Lab. (ANL), Argonne, IL (United States). Center for Structural Genomics of Infectious Diseases; Argonne National Lab. (ANL), Argonne, IL (United States). Biosciences Division

The Bacillus anthracis virulence regulator AtxA controls transcription of the anthrax toxin genes and capsule biosynthesis operon. AtxA activity is elevated during growth in media containing glucose and CO2/bicarbonate, and there is a positive correlation between the CO2/bicarbonate signal, AtxA activity, and homomultimerization. AtxA activity is also affected by phosphorylation at specific histidines. We show that AtxA crystallizes as a dimer. Distinct folds associated with predicted DNA-binding domains (HTH1 and HTH2) and phosphoenolpyruvate: carbohydrate phosphotransferase system-regulated domains (PRD1 and PRD2) are apparent. We tested AtxA variants containing single and double phosphomimetic (His → Asp) and phosphoablative (His → Ala) amino acid changes for activity in B. anthracis cultures and for protein-protein interactions in cell lysates. Reduced activity of AtxA H199A, lack of multimerization and activity of AtxAH379D variants, and predicted structural changes associated with phosphorylation support a model for control of AtxA function. We propose that (1) in the AtxA dimer, phosphorylation of H199 in PRD1 affects HTH2 positioning, influencing DNA-binding; and (2) phosphorylation of H379 in PRD2 disrupts dimer formation. In conclusion, the AtxA structure is the first reported high-resolution full-length structure of a PRD-containing regulator and can serve as a model for proteins of this family, especially those that link virulence to bacterial metabolism.

Research Organization:
Argonne National Laboratory (ANL), Argonne, IL (United States)
Sponsoring Organization:
USDOE Office of Science (SC), Biological and Environmental Research (BER)
Grant/Contract Number:
AC02-06CH11357; HHSN272200700058C; HHSN272201200026C; R01 AI033537; 1 T32 AI065396
OSTI ID:
1280877
Journal Information:
Molecular Microbiology, Vol. 95, Issue 3; ISSN 0950-382X
Publisher:
WileyCopyright Statement
Country of Publication:
United States
Language:
English
Citation Metrics:
Cited by: 28 works
Citation information provided by
Web of Science

References (68)

PHENIX : building new software for automated crystallographic structure determination journal October 2002
Transcriptional regulation of the protective antigen gene of Bacillus anthracis. journal January 1989
Experimental and Computational Characterization of the Dimerization of the PTS-regulation Domains of BglG from Escherichia coli journal April 2005
Functional Dissection of the Bacillus subtilis pur Operator Site journal July 2003
Studies on Lysogenesis i. journal January 1951
Global Effects of Virulence Gene Regulators in a Bacillus anthracis Strain with Both Virulence Plasmids journal May 2003
A Bacillus thuringiensis strain producing a polyglutamate capsule resembling that of Bacillus anthracis journal August 2008
Kinetic Studies of HPr, HPr(H15D), HPr(H15E), and HPr(His∼P) Phosphorylation by the Streptococcus salivarius HPr(Ser) Kinase/Phosphorylase journal November 2009
Regulation of pag gene expression in Bacillus anthracis : use of a pag-lacZ transcriptional fusion journal November 1992
Sialylation of Group B Streptococcal Capsular Polysaccharide Is Mediated by cpsK and Is Required for Optimal Capsule Polymerization and Expression journal July 2005
Glucose-Dependent Activation of Bacillus anthracis Toxin Gene Expression and Virulence Requires the Carbon Catabolite Protein CcpA journal October 2010
The CCP4 suite programs for protein crystallography journal September 1994
Regulation of anthrax toxin activator gene (atxA) expression in Bacillus anthracis: temperature, not CO2/bicarbonate, affects AtxA synthesis. journal January 1997
The atxA gene product activates transcription of the anthrax toxin genes and is essential for virulence journal June 1995
cis-Acting Elements That Control Expression of the Master Virulence Regulatory Gene atxA in Bacillus anthracis journal May 2012
MOLPROBITY: structure validation and all-atom contact analysis for nucleic acids and their complexes journal July 2004
atxA Controls Bacillus anthracis Capsule Synthesis via acpA and a Newly Discovered Regulator, acpB journal December 2003
New LIC vectors for production of proteins from genes containing rare codons journal September 2013
Differential influence of the two Bacillus anthracis plasmids on regulation of virulence gene expression. journal January 1996
Pi sampling: a methodical and flexible approach to initial macromolecular crystallization screening journal April 2011
Activation of the LicT Transcriptional Antiterminator Involves a Domain Swing/Lock Mechanism Provoking Massive Structural Changes journal February 2005
Demonstration of a capsule plasmid in Bacillus anthracis. journal January 1985
Intrinsic curvature associated with the coordinately regulated anthrax toxin gene promoters journal August 2008
Bacillus anthracis virulence regulator AtxA: oligomeric state, function and CO2-signalling: B. anthracis AtxA multimerization journal October 2011
Structure of the RBD-PRDI fragment of the antiterminator protein GlcT journal June 2012
Dali server: conservation mapping in 3D journal May 2010
The Mga virulence regulon: infection where the grass is greener journal December 2007
Characterization of the Group A Streptococcus Mga virulence regulator reveals a role for the C-terminal region in oligomerization and transcriptional activation: Mga oligomerization and activity journal January 2012
PTS phosphorylation of Mga modulates regulon expression and virulence in the group A streptococcus: PTS phosphorylation of Mga journal May 2013
Engineering hybrid genes without the use of restriction enzymes: gene splicing by overlap extension journal April 1989
Control of Bacillus subtilis mtl operon expression by complex phosphorylation-dependent regulation of the transcriptional activator MtlR: Role of the EIIBGat-like domain in MtlR regulation journal April 2010
Regulation of the Bacillus anthracis protective antigen gene: CO2 and a trans-acting element activate transcription from one of two promoters. journal February 1994
Inference of Macromolecular Assemblies from Crystalline State journal September 2007
ProFunc: a server for predicting protein function from 3D structure journal July 2005
Structural basis for regulation of rhizobial nodulation and symbiosis gene expression by the regulatory protein NolR journal April 2014
Crystal Structures of Phosphotransferase System Enzymes PtxB (IIBAsc) and PtxA (IIAAsc) from Streptococcus mutans journal February 2009
Two DNA-binding domains of Mga are required for virulence gene activation in the group A streptococcus journal March 2002
Specific binding of the activator Mga to promoter sequences of the emm and scpA genes in the group A streptococcus. journal January 1995
The transformation frequency of plasmids into Bacillus anthracis is affected by adenine methylation journal January 1995
A plasmid-encoded regulator couples the synthesis of toxins and surface structures in Bacillus anthracis: pXO1 regulators in B. anthracis journal February 2003
Refinement of Macromolecular Structures by the Maximum-Likelihood Method journal May 1997
An asymmetric heterodomain interface stabilizes a response regulator–DNA complex journal February 2014
Virulence Meets Metabolism: Cra and KdpE Gene Regulation in Enterohemorrhagic Escherichia coli journal October 2012
Bacillus anthracis sin Locus and Regulation of Secreted Proteases journal December 2010
The Complete Genome Sequence of Bacillus anthracis Ames "Ancestor" journal October 2008
Defining the Mga regulon: comparative transcriptome analysis reveals both direct and indirect regulation by Mga in the group A streptococcus: Transcriptome analysis of the Mga regulon journal September 2006
The Structural Biology Center 19ID undulator beamline: facility specifications and protein crystallographic results journal December 2005
Control of Anthrax Toxin Gene Expression by the Transition State Regulator abrB journal January 2002
Control of the Bacillus subtilis Antiterminator Protein GlcT by Phosphorylation: ELUCIDATION OF THE PHOSPHORYLATION CHAIN LEADING TO INACTIVATION OF GlcT journal October 2003
LicT, a Bacillus subtilis transcriptional antiterminator protein of the BglG family. journal January 1996
Vaccinia DNA topoisomerase I promotes illegitimate recombination in Escherichia coli. journal May 1989
The three Bacillus anthracis toxin genes are coordinately regulated by bicarbonate and temperature. journal January 1994
Characterization of a plasmid region involved in Bacillus anthracis toxin production and pathogenesis journal October 2000
The pneumococcal MgaSpn virulence transcriptional regulator generates multimeric complexes on linear double-stranded DNA journal May 2013
The DNA-binding specificity of the Bacillus anthracis AbrB protein journal June 2005
PRD ? a protein domain involved in PTS-dependent induction and carbon catabolite repression of catabolic operons in bacteria journal June 1998
An Agar-Diffusion Method for Titrating Bacillus anthracis Immunizing Antigen and its Application to a Study of Antigen Production journal October 1957
Crystal structure of an activated form of the PTS regulation domain from the LicT transcriptional antiterminator journal July 2001
Regulation of the lic Operon ofBacillus subtilis and Characterization of Potential Phosphorylation Sites of the LicR Regulator Protein by Site-Directed Mutagenesis journal August 1999
Sites of positive and negative regulation in the Bacillus subtilis antiterminators LicT and SacY journal September 2001
Opposing effects of histidine phosphorylation regulate the AtxA virulence transcription factor in Bacillus anthracis journal February 2007
Taking MAD to the extreme: ultrafast protein structure determination journal June 1999
The role of antibodies to Bacillus anthracis and anthrax toxin components in inhibiting the early stages of infection by anthrax spores journal June 2001
The Bacillus subtilis mannose regulator, ManR, a DNA-binding protein regulated by HPr and its cognate PTS transporter ManP: The Bacillus subtilis mannose regulator ManR journal April 2013
Two small c-type cytochromes affect virulence gene expression in Bacillus anthracis: Bacillus anthracis virulence regulation by cytochrome c journal March 2009
Common structural changes accompany the functional inactivation of HPr by seryl phosphorylation or by serine to aspartate substitution journal December 1989
Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mpl8 and pUC19 vectors journal January 1985
InterProScan - an integration platform for the signature-recognition methods in InterPro journal September 2001

Cited By (7)

DNA‐binding properties of MafR, a global regulator of Enterococcus faecalis journal December 2017
Glucose Levels Alter the Mga Virulence Regulon in the Group A Streptococcus journal March 2018
Regulons and protein-protein interactions of PRD-containing Bacillus anthracis virulence regulators reveal overlapping but distinct functions: Regulons of B. anthracis PCVRs journal April 2018
Influence of the phosphoenolpyruvate:carbohydrate phosphotransferase system on toxin gene expression and virulence in Bacillus anthracis journal November 2019
MgaSpn and H-NS: Two Unrelated Global Regulators with Similar DNA-Binding Properties journal September 2016
Upstream sequence-dependent suppression and AtxA-dependent activation of protective antigens in Bacillus anthracis journal January 2019
Global Regulation of Gene Expression by the MafR Protein of Enterococcus faecalis journal January 2016