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Title: Data on the purification and crystallization of the loss-of-function von Willebrand disease variant (p.Gly1324Ser) of the von Willebrand factor A1 domain

Journal Article · · Data in Brief

von Willebrand factor's (VWF) primary hemostatic responsibility is to deposit platelets at sites of vascular injury to prevent bleeding. This function is mediated by the interaction between the VWF A1 domain and the constitutively active platelet receptor, GPIbα. The crystal structure of the A1 domain harboring the von Willebrand disease (vWD) type 2M mutation p.Gly1324Ser has been recently published in the Journal of Biological Chemistry describing its effect on the function and structural stability of the A1 domain of VWF, “Mutational constraints on local unfolding inhibit the rheological adaptation of von Willebrand factor” [1]. The mutation introduces a side chain that thermodynamically stabilizes the domain by reducing the overall flexibility of the A1–GPIbα binding interface resulting in loss-of-function and bleeding due to the inability of A1 to adapt to a binding competent conformation under the rheological shear stress blood flow.

Research Organization:
Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States)
Sponsoring Organization:
USDOE Office of Science (SC), Biological and Environmental Research (BER). Biological Systems Science Division
Grant/Contract Number:
AC02-05CH11231
OSTI ID:
1252784
Alternate ID(s):
OSTI ID: 1629218
Journal Information:
Data in Brief, Journal Name: Data in Brief Vol. 7 Journal Issue: C; ISSN 2352-3409
Publisher:
ElsevierCopyright Statement
Country of Publication:
United States
Language:
English

References (13)

The linker between the D3 and A1 domains of vWF suppresses A1-GPIbα catch bonds by site-specific binding to the A1 domain: Conformational Inhibition of VWF-Platelet Adhesion journal July 2013
Misfolding of vWF to Pathologically Disordered Conformations Impacts the Severity of von Willebrand Disease journal September 2014
Overview of the CCP 4 suite and current developments journal March 2011
Better models by discarding data? journal June 2013
Towards automated crystallographic structure refinement with phenix.refine journal March 2012
Coot model-building tools for molecular graphics journal November 2004
Crystal Structure of the von Willebrand Factor A1 Domain and Implications for the Binding of Platelet Glycoprotein Ib journal April 1998
A Structural Explanation for the Antithrombotic Activity of ARC1172, a DNA Aptamer that Binds von Willebrand Factor Domain A1 journal November 2009
Crystal structure of the von Willebrand factor A1 domain in complex with the function blocking NMC-4 Fab journal March 1998
The snake venom protein botrocetin acts as a biological brace to promote dysfunctional platelet aggregation journal January 2005
Crystal Structure of von Willebrand Factor A1 Domain Complexed with Snake Venom, Bitiscetin: INSIGHT INTO GLYCOPROTEIN Ibα BINDING MECHANISM INDUCED BY SNAKE VENOM PROTEINS journal July 2003
Structures of Glycoprotein Ibalpha and Its Complex with von Willebrand Factor A1 Domain journal August 2002
von Willebrand factor conformation and adhesive function is modulated by an internalized water molecule
  • Ruggeri, Zaverio M.; Varughese, Kottayil I.; Celikel, Reha
  • Nature Structural Biology, Vol. 7, Issue 10, p. 881-884 https://doi.org/10.1038/79639
journal October 2000

Cited By (2)

Glycosylation sterically inhibits platelet adhesion to von Willebrand factor without altering intrinsic conformational dynamics journal October 2019
Platelet‐type von Willebrand disease: Local disorder of the platelet GPI bα β‐switch drives high‐affinity binding to von Willebrand factor journal September 2019

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