skip to main content
OSTI.GOV title logo U.S. Department of Energy
Office of Scientific and Technical Information

Title: β-Subunit Binding Is Sufficient for Ligands to Open the Integrin αIIbβ3 Headpiece

Journal Article · · Journal of Biological Chemistry
 [1];  [1];  [2];  [1];  [1]
  1. Harvard Medical School, Boston, MA (United States)
  2. Harvard Medical School, Boston, MA (United States); New York Structural Biology Center, New York, NY (United States)

The platelet integrin αIIbβ3 binds to a KQAGDV motif at the fibrinogen γ-chain C terminus and to RGD motifs present in loops in many extracellular matrix proteins. These ligands bind in a groove between the integrin α and β-subunits; the basic Lys or Arg side chain hydrogen bonds to the αIIb-subunit, and the acidic Asp side chain coordinates to a metal ion held by the β3-subunit. Ligand binding induces headpiece opening, with conformational change in the β-subunit. During this opening, RGD slides in the ligand-binding pocket toward αIIb, with movement of the βI-domain β1-α1 loop toward αIIb, enabling formation of direct, charged hydrogen bonds between the Arg side chain and αIIb. Here we test whether ligand interactions with β3 suffice for stable ligand binding and headpiece opening. We find that the AGDV tetrapeptide from KQAGDV binds to the αIIbβ3 headpiece with affinity comparable with the RGDSP peptide from fibronectin. AGDV induced complete headpiece opening in solution as shown by increase in hydrodynamic radius. Soaking of AGDV into closed αIIbβ3 headpiece crystals induced intermediate states similarly to RGDSP. AGDV has very little contact with the α-subunit. Furthermore, as measured by epitope exposure, AGDV, like the fibrinogen γ C-terminal peptide and RGD, caused integrin extension on the cell surface. Thus, pushing by the β3-subunit on Asp is sufficient for headpiece opening and ligand sliding, and no pulling by the αIIb subunit on Arg is required.

Research Organization:
Argonne National Lab. (ANL), Argonne, IL (United States)
Sponsoring Organization:
USDOE Office of Science (SC), Basic Energy Sciences (BES). Scientific User Facilities Division; National Inst. of Health
Grant/Contract Number:
AC02-06CH11357; HL103526; ACB-12002; AGM-12006
OSTI ID:
1252769
Journal Information:
Journal of Biological Chemistry, Vol. 291, Issue 9; ISSN 0021-9258
Publisher:
American Society for Biochemistry and Molecular BiologyCopyright Statement
Country of Publication:
United States
Language:
ENGLISH
Citation Metrics:
Cited by: 20 works
Citation information provided by
Web of Science

References (27)

Structural basis for distinctive recognition of fibrinogen γC peptide by the platelet integrin α IIb β 3 journal August 2008
Linking Crystallographic Model and Data Quality journal May 2012
Regulation of integrin affinity on cell surfaces: Regulation of integrin affinity on cell surfaces journal September 2011
Structural basis for allostery in integrins and binding to fibrinogen-mimetic therapeutics journal September 2004
Simulation of Diffusion Time of Small Molecules in Protein Crystals journal March 2006
Structure of a Complete Integrin Ectodomain in a Physiologic Resting State and Activation and Deactivation by Applied Forces journal December 2008
Complete integrin headpiece opening in eight steps journal June 2013
The Platelet Integrin αIIbβ3 Binds to the RGD and AGD Motifs in Fibrinogen journal September 2009
Stabilizing the open conformation of the integrin headpiece with a glycan wedge increases affinity for ligand journal February 2003
Platelet receptor recognition domain on the .gamma. chain of human fibrinogen and its synthetic peptide analogues journal April 1989
PHENIX: a comprehensive Python-based system for macromolecular structure solution journal January 2010
Non-Peptide GPIIb/IIIa Inhibitors. 20. Centrally Constrained Thienothiophene α-Sulfonamides Are Potent, Long Acting in Vivo Inhibitors of Platelet Aggregation journal July 1999
Crystal Structure of the Extracellular Segment of Integrin alpha Vbeta 3 in Complex with an Arg-Gly-Asp Ligand journal March 2002
Calculation of Hydrodynamic Properties of Globular Proteins from Their Atomic-Level Structure journal February 2000
Integrin inside-out signaling and the immunological synapse journal February 2012
Analysis of protein-ligand interactions by fluorescence polarization journal March 2011
Lamprey fibrinogen .gamma. chain: cloning, cDNA sequencing, and general characterization journal January 1985
Role of fibrinogen alpha and gamma chain sites in platelet aggregation. journal November 1992
Closed headpiece of integrin αIIbβ3 and its complex with an αIIbβ3-specific antagonist that does not induce opening journal December 2010
Intact α IIb β 3 Integrin Is Extended after Activation as Measured by Solution X-ray Scattering and Electron Microscopy journal August 2011
Impaired platelet aggregation and sustained bleeding in mice lacking the fibrinogen motif bound by integrin alpha IIb beta 3. journal November 1996
Inference of Macromolecular Assemblies from Crystalline State journal September 2007
Platelet receptor recognition site on human fibrinogen. Synthesis and structure-function relationship of peptides corresponding to the carboxy-terminal segment of the .gamma. chain journal April 1984
Specific versus non-specific contacts in protein crystals journal December 1997
Low molecular weight, non-peptide fibrinogen receptor antagonists journal November 1992
Examination of the platelet membrane glycoprotein IIb-IIIa complex and its interaction with fibrinogen and other ligands by electron microscopy. journal August 1992
Amino Acid Sequences in Fibrinogen Mediating Its Interaction with Its Platelet Receptor, GPIIbIIIa journal June 1989

Cited By (2)

The Importance of Detail: How Differences in Ligand Structures Determine Distinct Functional Responses in Integrin α v β 3 journal March 2019
Relating conformation to function in integrin α 5 β 1 journal June 2016