The bacterial cytochrome cbb3 oxidases
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April 2004 |
Iron oxyhydroxide mineralization on microbial extracellular polysaccharides
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July 2009 |
Abundance of Zetaproteobacteria within crustal fluids in back-arc hydrothermal fields of the Southern Mariana Trough
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December 2009 |
Iron biomineralization by anaerobic neutrophilic iron-oxidizing bacteria
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February 2009 |
The surprisingly diverse ways that prokaryotes move
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May 2008 |
Shifting the genomic gold standard for the prokaryotic species definition
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October 2009 |
New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0
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March 2010 |
Towards a taxonomic coherence between average nucleotide identity and 16S rRNA gene sequence similarity for species demarcation of prokaryotes
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February 2014 |
Selection of Conserved Blocks from Multiple Alignments for Their Use in Phylogenetic Analysis
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April 2000 |
ARAGORN, a program to detect tRNA genes and tmRNA genes in nucleotide sequences
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January 2004 |
RNAmmer: consistent and rapid annotation of ribosomal RNA genes
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April 2007 |
A Novel Lineage of Proteobacteria Involved in Formation of Marine Fe-Oxidizing Microbial Mat Communities
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August 2007 |
Functional Gene Analysis of Freshwater Iron-Rich Flocs at Circumneutral pH and Isolation of a Stalk-Forming Microaerophilic Iron-Oxidizing Bacterium
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June 2013 |
InterProScan - an integration platform for the signature-recognition methods in InterPro
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September 2001 |
High-quality draft assemblies of mammalian genomes from massively parallel sequence data
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December 2010 |
Sulfite oxidation in the purple sulfur bacterium Allochromatium vinosum: identification of SoeABC as a major player and relevance of SoxYZ in the process
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December 2013 |
The “bacterial heterodisulfide” DsrC is a key protein in dissimilatory sulfur metabolism
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July 2014 |
Solexa Ltd
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June 2004 |
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
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September 1997 |
FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments
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March 2010 |
Multiple Rubisco forms in proteobacteria: their functional significance in relation to CO2 acquisition by the CBB cycle
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February 2008 |
Functional analysis and expression of the mono-heme containing cytochrome c subunit of alternative complex III in Chloroflexus aurantiacus
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July 2013 |
Nitrotoga-like bacteria are previously unrecognized key nitrite oxidizers in full-scale wastewater treatment plants
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September 2014 |
Genome sequence-based species delimitation with confidence intervals and improved distance functions
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January 2013 |
Prodigal: prokaryotic gene recognition and translation initiation site identification
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March 2010 |
Low-oxygen and chemical kinetic constraints on the geochemical niche of neutrophilic iron(II) oxidizing microorganisms
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July 2008 |
A New Iron-oxidizing/O 2 -reducing Supercomplex Spanning Both Inner and Outer Membranes, Isolated from the Extreme Acidophile Acidithiobacillus ferrooxidans
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July 2008 |
KEGG: Kyoto Encyclopedia of Genes and Genomes
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January 1999 |
Nanometer-Scale Visualization and Structural Analysis of the Inorganic/Organic Hybrid Structure of Gallionella ferruginea Twisted Stalks
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March 2011 |
MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
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January 2013 |
MEGAN analysis of metagenomic data
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February 2007 |
Quorum sensing modulation of a putative glycosyltransferase gene cluster essential for Xanthomonas campestris biofilm formation: A glycosyltransferase in Xcc biofilm formation
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December 2010 |
Complete genomes of freshwater sulfur oxidizers Sulfuricella denitrificans skB26 and Sulfuritalea hydrogenivorans sk43H: Genetic insights into the sulfur oxidation pathway of betaproteobacteria
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September 2014 |
Identification and Characterization of MtoA: A Decaheme c-Type Cytochrome of the Neutrophilic Fe(II)-Oxidizing Bacterium Sideroxydans lithotrophicus ES-1
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January 2012 |
The biofilm matrix
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August 2010 |
Prokka: rapid prokaryotic genome annotation
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March 2014 |
Metagenomic analysis of a high carbon dioxide subsurface microbial community populated by chemolithoautotrophs and bacteria and archaea from candidate phyla: High CO
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April 2015 |
The bc1 complex of the iron-grown acidophilic chemolithotrophic bacterium Acidithiobacillus ferrooxidans functions in the reverse but not in the forward direction
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September 2002 |
Regulation of flagellar motility during biofilm formation
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November 2013 |
The prokaryotic complex iron–sulfur molybdoenzyme family
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September 2008 |
Distribution and phylogenetic diversity of cbbM genes encoding RubisCO form II in a deep-sea hydrothermal field revealed by newly designed PCR primers
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January 2012 |
The alternative complex III from Rhodothermus marinus - A prototype of a new family of quinol:electron acceptor oxidoreductases
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September 2007 |
Novel Genes of the dsr Gene Cluster and Evidence for Close Interaction of Dsr Proteins during Sulfur Oxidation in the Phototrophic Sulfur Bacterium Allochromatium vinosum
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February 2005 |
Glycosyltransferases: Structures, Functions, and Mechanisms
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June 2008 |
Comparative genomics of freshwater Fe-oxidizing bacteria: implications for physiology, ecology, and systematics
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January 2013 |
Ferriphaselus amnicola gen. nov., sp. nov., a neutrophilic, stalk-forming, iron-oxidizing bacterium isolated from an iron-rich groundwater seep
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December 2013 |
Cultivation of a novel cold-adapted nitrite oxidizing betaproteobacterium from the Siberian Arctic
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June 2007 |
HMMER web server: interactive sequence similarity searching
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May 2011 |
MUSCLE: multiple sequence alignment with high accuracy and high throughput
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March 2004 |
Control of Ferrous Iron Oxidation within Circumneutral Microbial Iron Mats by Cellular Activity and Autocatalysis
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September 2007 |
Insights into the phylogeny and coding potential of microbial dark matter
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July 2013 |
PSORTb 3.0: improved protein subcellular localization prediction with refined localization subcategories and predictive capabilities for all prokaryotes
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May 2010 |
Infernal 1.1: 100-fold faster RNA homology searches
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September 2013 |
Genomic insights into the uncultivated marine Zetaproteobacteria at Loihi Seamount
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October 2014 |
New Class of Bacterial Membrane Oxidoreductases †
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August 2005 |
Morphology of biogenic iron oxides records microbial physiology and environmental conditions: toward interpreting iron microfossils
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June 2013 |
Iron-Oxidizing Bacteria: An Environmental and Genomic Perspective
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October 2010 |
Dynamic hydrologic and biogeochemical processes drive microbially enhanced iron and sulfur cycling within the intertidal mixing zone of a beach aquifer: Fe and S cycling in a beach aquifer
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January 2015 |
Type IV Pili and Twitching Motility
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October 2002 |
New Insight into Microbial Iron Oxidation as Revealed by the Proteomic Profile of an Obligate Iron-Oxidizing Chemolithoautotroph
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June 2015 |
Biogeochemical Properties of Bacteriogenic Iron Oxides
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April 2005 |
The cytochrome bd respiratory oxygen reductases
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November 2011 |
Biofilms, flagella, and mechanosensing of surfaces by bacteria
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September 2014 |
Lithotrophic iron-oxidizing bacteria produce organic stalks to control mineral growth: implications for biosignature formation
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November 2010 |
Enzymatic activity of the alternative complex III as a menaquinol:auracyanin oxidoreductase in the electron transfer chain of Chloroflexus aurantiacus
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September 2009 |
IMG 4 version of the integrated microbial genomes comparative analysis system
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October 2013 |
Search and clustering orders of magnitude faster than BLAST
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August 2010 |
Velvet: Algorithms for de novo short read assembly using de Bruijn graphs
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February 2008 |
The alternative complex III of Rhodothermus marinus and its structural and functional association with caa3 oxygen reductase
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August 2010 |
What's New Is Old: Resolving the Identity of Leptothrix ochracea Using Single Cell Genomics, Pyrosequencing and FISH
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March 2011 |
progressiveMauve: Multiple Genome Alignment with Gene Gain, Loss and Rearrangement
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June 2010 |
Cloning, DNA sequencing, and characterization of a nifD-homologous gene from the archaeon Methanosarcina barkeri 227 which resembles nifD1 from the eubacterium Clostridium pasteurianum.
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November 1994 |
Biogeochemical Redox Processes and their Impact on Contaminant Dynamics
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January 2010 |
Benefits associated with the stalk of Gallionella ferruginea, evaluated by comparison of a stalk-forming and a non-stalk-forming strain and biofilm studies in situ
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November 1995 |
Carbon adsorption onto Fe oxyhydroxide stalks produced by a lithotrophic iron-oxidizing bacteria
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January 2014 |
Distribution of nitrogen fixation and nitrogenase-like sequences amongst microbial genomes
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January 2012 |
Mariprofundus ferrooxydans PV-1 the First Genome of a Marine Fe(II) Oxidizing Zetaproteobacterium
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September 2011 |
Microbial communities in iron-silica-rich microbial mats at deep-sea hydrothermal fields of the Southern Mariana Trough
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August 2009 |
Hidden in plain sight: discovery of sheath-forming, iron-oxidizing Zetaproteobacteria at Loihi Seamount, Hawaii, USA
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April 2013 |
Signal processing in complex chemotaxis pathways
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February 2011 |
Isolation and characterization of a novel biomineral stalk-forming iron-oxidizing bacterium from a circumneutral groundwater seep: A novel stalk-forming Fe-oxidizing bacterium
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December 2011 |
Diversity of iron oxidizers in wetland soils revealed by novel 16S rRNA primers targeting Gallionella-related bacteria
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February 2009 |
Colonization of subsurface microbial observatories deployed in young ocean crust
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November 2010 |
Characterization of Neutrophilic Fe(II)-Oxidizing Bacteria Isolated from the Rhizosphere of Wetland Plants and Description of Ferritrophicum radicicola gen. nov. sp. nov., and Sideroxydans paludicola sp. nov.
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December 2007 |
A new structure-based classification of sulfide:quinone oxidoreductases
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December 2009 |
How Bacteria Assemble Flagella
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October 2003 |
Electron Microscopy of Gallionella Ferruginea1
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January 1956 |
Phylogeny of Dissimilatory Sulfite Reductases Supports an Early Origin of Sulfate Respiration
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June 1998 |
Systematic discovery of pseudomonad genetic factors involved in sensitivity to tailocins
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March 2021 |
Alcohol pretreatment of stools effect on culturomics
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March 2020 |
Draft Genome Sequence of Comamonas aquatilis Strain LK (= CSUR P6418 = CECT 9772), Isolated from the Planarian Schmidtea mediterranea
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February 2021 |
Towards a taxonomic coherence between average nucleotide identity and 16S rRNA gene sequence similarity for species demarcation of prokaryotes
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journal
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May 2014 |
New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0
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January 2010 |
Biofilm formation by strains of Burkholderia cenocepacia lineages IIIA and IIIB and B. gladioli pv. alliicola associated with onion bacterial scale rot
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August 2021 |
Molecular biology of cellulose production in bacteria
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May 2002 |
How Myxobacteria Glide
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March 2002 |
The junctional pore complex, a prokaryotic secretion organelle, is the molecular motor underlying gliding motility in cyanobacteria
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October 1998 |
Degradation of biological macromolecules supports uncultured microbial populations in Guaymas Basin hydrothermal sediments
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June 2021 |
Commensal Pseudomonas protect Arabidopsis thaliana from a coexisting pathogen via multiple lineage-dependent mechanisms
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December 2021 |
Erroneous predictions of auxotrophies by CarveMe
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December 2022 |
Full-length transcriptome analysis of multiple organs and identification of adaptive genes and pathways in Mikania micrantha
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February 2022 |
The Qrc Membrane Complex, Related to the Alternative Complex III, Is a Menaquinone Reductase Involved in Sulfate Respiration
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May 2010 |
Apo- and Cellopentaose-bound Structures of the Bacterial Cellulose Synthase Subunit BcsZ
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March 2011 |
Extracellular Iron Biomineralization by Photoautotrophic Iron-Oxidizing Bacteria
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July 2009 |
A Previously Uncharacterized, Nonphotosynthetic Member of the Chromatiaceae Is the Primary CO 2 -Fixing Constituent in a Self-Regenerating Biocathode
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November 2014 |
Uncovering a Microbial Enigma: Isolation and Characterization of the Streamer-Generating, Iron-Oxidizing, Acidophilic Bacterium “Ferrovum myxofaciens”
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November 2013 |
Isolation and characterization of novel iron-oxidizing bacteria that grow at circumneutral pH.
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January 1997 |
A Selective Enrichment Method for Gallionella Ferruginea1
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January 1957 |