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Finished genome assembly of warm spring isolate Francisella novicida DPG 3A-IS

Journal Article · · Genome Announcements
 [1];  [2];  [1];  [2];  [1];  [2];  [1];  [2];  [1]
  1. Los Alamos National Lab. (LANL), Los Alamos, NM (United States)
  2. U.S. Army Medical Research Institute for Infectious Diseases (USAMRIID), Frederick, MD (United States)
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We sequenced the complete genome of Francisella novicida DPG 3A-IS to closed and finished status. This is a warm spring isolate recovered from Hobo Warm Spring (Utah, USA). The last assembly is available in NCBI under accession number CP012037.

Research Organization:
Los Alamos National Lab. (LANL), Los Alamos, NM (United States)
Sponsoring Organization:
USDOE
Grant/Contract Number:
AC52-06NA25396
OSTI ID:
1234252
Report Number(s):
LA-UR--15-25940
Journal Information:
Genome Announcements, Journal Name: Genome Announcements Journal Issue: 5 Vol. 3; ISSN 2169-8287
Publisher:
American Society for MicrobiologyCopyright Statement
Country of Publication:
United States
Language:
English

References (8)

Outbreak of Francisella novicida Bacteremia Among Inmates at a Louisiana Correctional Facility journal June 2014
Velvet: Algorithms for de novo short read assembly using de Bruijn graphs journal February 2008
ALLPATHS: De novo assembly of whole-genome shotgun microreads journal February 2008
Base-Calling of Automated Sequencer Traces Using Phred.  I. Accuracy Assessment journal March 1998
Base-Calling of Automated Sequencer Traces Using Phred. II. Error Probabilities journal March 1998
Identification and characterization of Francisella species from natural warm springs in Utah, USA: Francisella from natural warm springs in Utah journal February 2012
Genomic Markers for Differentiation of Francisella tularensis subsp. tularensis A.I and A.II Strains journal November 2007
Solexa Ltd journal June 2004

Cited By (2)

Whole-Genome Relationships among Francisella Bacteria of Diverse Origins Define New Species and Provide Specific Regions for Detection journal November 2016
Shared features of cryptic plasmids from environmental and pathogenic Francisella species journal August 2017

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Related Subjects

59 BASIC BIOLOGICAL SCIENCES