skip to main content
OSTI.GOV title logo U.S. Department of Energy
Office of Scientific and Technical Information

Title: Coiled-coil coactivators play a structural role mediating interactions in hypoxia-inducible factor heterodimerization

Journal Article · · Journal of Biological Chemistry
 [1];  [1];  [2];  [1];  [3]
  1. Univ. of Texas, Dallas, TX (United States)
  2. Univ. of Texas, Dallas, TX (United States); Univ. of California, Santa Cruz, CA (United States)
  3. Univ. of Texas, Dallas, TX (United States); City College of New York, New York, NY (United States)

The hypoxia-inducible factor complex (HIF-α·aryl hydrocarbon receptor nuclear translocator (ARNT)) requires association with several transcription coactivators for a successful cellular response to hypoxic stress. In addition to the conventional global transcription coactivator CREB-binding protein/p300 (CBP/p300) that binds to the HIF-α transactivation domain, a new group of transcription coactivators called the coiled-coil coactivators (CCCs) interact directly with the second PER-ARNT-SIM (PAS) domain of ARNT (ARNT PAS-B). These less studied transcription coactivators play essential roles in the HIF-dependent hypoxia response, and CCC misregulation is associated with several forms of cancer. To better understand CCC protein recruitment by the heterodimeric HIF transcription factor, we used x-ray crystallography, NMR spectroscopy, and biochemical methods to investigate the structure of the ARNT PAS-B domain in complex with the C-terminal fragment of a coiled-coil coactivator protein, transforming acidic coiled-coil coactivator 3 (TACC3). We found that the HIF-2α PAS-B domain also directly interacts with TACC3, motivating an NMR data-derived model suggesting a means by which TACC3 could form a ternary complex with HIF-2α PAS-B and ARNT PAS-B via β-sheet/coiled-coil interactions. Furthermore, these findings suggest that TACC3 could be recruited as a bridge to cooperatively mediate between the HIF-2α PAS-B·ARNT PAS-B complex, thereby participating more directly in HIF-dependent gene transcription than previously anticipated.

Research Organization:
Argonne National Lab. (ANL), Argonne, IL (United States). Advanced Photon Source (APS)
Sponsoring Organization:
National Institutes of Health (NIH); USDOE Office of Science (SC), Biological and Environmental Research (BER)
Grant/Contract Number:
AC02-06CH11357; R01 GM081875; P01 CA095471; F32 CA130441; RP100846; RP130513
OSTI ID:
1208680
Journal Information:
Journal of Biological Chemistry, Vol. 290, Issue 12; ISSN 0021-9258
Publisher:
American Society for Biochemistry and Molecular BiologyCopyright Statement
Country of Publication:
United States
Language:
ENGLISH
Citation Metrics:
Cited by: 19 works
Citation information provided by
Web of Science

References (34)

Hypoxia-Inducible Factors and the Response to Hypoxic Stress journal October 2010
Hypoxia-Inducible Factors in Physiology and Medicine journal February 2012
Hypoxia-inducible factors: central regulators of the tumor phenotype journal February 2007
Structural basis for recruitment of CBP/p300 by hypoxia-inducible factor-1  journal April 2002
Molecular Basis of Coiled Coil Coactivator Recruitment by the Aryl Hydrocarbon Receptor Nuclear Translocator (ARNT) journal March 2009
Coactivators necessary for transcriptional output of the hypoxia inducible factor, HIF, are directly recruited by ARNT PAS-B journal April 2011
Role of the Coiled-coil Coactivator (CoCoA) in Aryl Hydrocarbon Receptor-mediated Transcription journal September 2004
Recruitment of Thyroid Hormone Receptor/Retinoblastoma-interacting Protein 230 by the Aryl Hydrocarbon Receptor Nuclear Translocator Is Required for the Transcriptional Response to Both Dioxin and Hypoxia journal October 2004
Isolation and characterization of AINT: a novel ARNT interacting protein expressed during murine embryonic development journal October 2000
Transforming Fusions of FGFR and TACC Genes in Human Glioblastoma journal July 2012
Overcoming Expression and Purification Problems of RhoGDI Using a Family of “Parallel” Expression Vectors journal February 1999
Structural Basis of a Phototropin Light Switch journal September 2003
The Structure of the N-Terminus of Striated Muscle α-Tropomyosin in a Chimeric Peptide:  Nuclear Magnetic Resonance Structure and Circular Dichroism Studies , journal May 1998
HKL -3000: the integration of data reduction and structure solution – from diffraction images to an initial model in minutes journal July 2006
Phaser crystallographic software journal July 2007
Regulating the ARNT/TACC3 Axis: Multiple Approaches to Manipulating Protein/Protein Interactions with Small Molecules journal December 2012
Joint X-ray and neutron refinement with phenix.refine journal October 2010
MolProbity : all-atom structure validation for macromolecular crystallography journal December 2009
Artificial ligand binding within the HIF2α PAS-B domain of the HIF2 transcription factor journal January 2009
Recent developments in classical density modification journal March 2010
The Buccaneer software for automated model building. 1. Tracing protein chains journal August 2006
Improved methods for building protein models in electron density maps and the location of errors in these models journal March 1991
Features and development of Coot journal March 2010
Structural basis for PAS domain heterodimerization in the basic helix-loop-helix-PAS transcription factor hypoxia-inducible factor journal December 2003
Structural Basis of ARNT PAS-B Dimerization: Use of a Common Beta-sheet Interface for Hetero- and Homodimerization journal October 2005
NMRPipe: A multidimensional spectral processing system based on UNIX pipes journal November 1995
The HADDOCK web server for data-driven biomolecular docking journal April 2010
X-ray structure of the GCN4 leucine zipper, a two-stranded, parallel coiled coil journal October 1991
Detecting transient intermediates in macromolecular binding by paramagnetic NMR journal April 2006
Why molecules move along a temperature gradient journal December 2006
Allosteric inhibition of hypoxia inducible factor-2 with small molecules journal February 2013
Crystal Structure of the Heterodimeric CLOCK:BMAL1 Transcriptional Activator Complex journal May 2012
COSMIC (the Catalogue of Somatic Mutations in Cancer): a resource to investigate acquired mutations in human cancer journal November 2009
Development of Inhibitors of the PAS-B Domain of the HIF-2α Transcription Factor journal February 2013

Cited By (8)

Structural integration in hypoxia-inducible factors journal August 2015
The myosin mesa and the basis of hypercontractility caused by hypertrophic cardiomyopathy mutations journal May 2017
Hypoxia inducible factor (HIF) as a model for studying inhibition of protein–protein interactions journal January 2017
Druggability assessment of mammalian Per–Arnt–Sim [PAS] domains using computational approaches journal January 2019
Modulation of HIF-2α PAS-B domain contributes to physiological responses journal December 2018
FGFR-TACC gene fusions in human glioma journal November 2016
FGFR3–TACC3 cancer gene fusions cause mitotic defects by removal of endogenous TACC3 from the mitotic spindle journal August 2017
Molecular analysis of NPAS3 functional domains and variants journal December 2018