Detecting and Removing Data Artifacts in Hadamard Transform Ion Mobility-Mass Spectrometry Measurements

Prost, Spencer A.; Crowell, Kevin L.; Baker, Erin Shammel; Ibrahim, Yehia M.; Clowers, Brian H.; Monroe, Matthew E.; Anderson, Gordon A.; Smith, Richard D.; Payne, Samuel H.

doi:10.1007/s13361-014-0895-y

Detecting and Removing Data Artifacts in Hadamard Transform Ion Mobility-Mass Spectrometry Measurements

Journal Article · Tue May 06 00:00:00 EDT 2014 · Journal of the American Society for Mass Spectrometry

DOI:https://doi.org/10.1007/s13361-014-0895-y· OSTI ID:1166861

Prost, Spencer A. ^[1]; Crowell, Kevin L. ^[1]; Baker, Erin Shammel ^[1]; Ibrahim, Yehia M. ^[1]; Clowers, Brian H. ^[2]; Monroe, Matthew E. ^[1]; Anderson, Gordon A. ^[1]; Smith, Richard D. ^[1]; Payne, Samuel H. ^[1]

Pacific Northwest National Lab. (PNNL), Richland, WA (United States). Biological Sciences Division
Washington State Univ., Pullman, WA (United States). Dept. of Chemistry

Applying Hadamard transform multiplexing to ion mobility separations (IMS) can significantly improve the signal-to-noise ratio and throughput for IMS coupled mass spectrometry (MS) measurements by increasing the ion utilization efficiency. However, it has been determined that both fluctuations in ion intensity as well as spatial shifts in the multiplexed data lower the signal-to-noise ratios and appear as noise in downstream processing of the data. To address this problem, we have developed a novel algorithm that discovers and eliminates data artifacts. The algorithm uses knowledge of the true signal peaks derived from the encoded data and allows for both artifacts and noise to be removed with high confidence, decreasing the likelihood of false identifications in subsequent data processing. The result is that IMS-MS can be applied to increase measurement sensitivity while avoiding artifacts that have previously limited its utility.

View Accepted Manuscript (DOE)

Research Organization:: Pacific Northwest National Laboratory (PNNL), Richland, WA (US), Environmental Molecular Sciences Laboratory (EMSL)

Sponsoring Organization:: USDOE Office of Science (SC), Biological and Environmental Research (BER) (SC-23)

OSTI ID:: 1166861

Report Number(s):: PNNL-SA-100086; 32707; 48135; 400412000

Journal Information:: Journal of the American Society for Mass Spectrometry, Journal Name: Journal of the American Society for Mass Spectrometry Journal Issue: 12 Vol. 25; ISSN 1044-0305

Publisher:: American Society for Mass SpectrometryCopyright Statement

Country of Publication:: United States

Language:: English

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Cited By (3)

Ion Mobility-Mass Spectrometry: Time-Dispersive Instrumentation May, Jody C.; McLean, John A. Analytical Chemistry, Vol. 87, Issue 3 https://doi.org/10.1021/ac504720m	journal	January 2015
Lipid and Glycolipid Isomer Analyses Using Ultra-High Resolution Ion Mobility Spectrometry Separations Wojcik, Roza; Webb, Ian; Deng, Liulin International Journal of Molecular Sciences, Vol. 18, Issue 1 https://doi.org/10.3390/ijms18010183	journal	January 2017
Influence of multiplexing conditions on artefact signal and the signal-to-noise ratio in the decoded data in Hadamard transform ion mobility spectrometry Sarycheva, Anastasia; Adamov, Alexey; Poteshin, Sergey S. European Journal of Mass Spectrometry, Vol. 26, Issue 3 https://doi.org/10.1177/1469066719900763	journal	January 2020

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Detecting and Removing Data Artifacts in Hadamard Transform Ion Mobility-Mass Spectrometry Measurements

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