Algal functional annotation tool
- UCLA; University of California, Los Angeles
- UCLA
The Algal Functional Annotation Tool is a web-based comprehensive analysis suite integrating annotation data from several pathway, ontology, and protein family databases. The current version provides annotation for the model alga Chlamydomonas reinhardtii, and in the future will include additional genomes. The site allows users to interpret large gene lists by identifying associated functional terms, and their enrichment. Additionally, expression data for several experimental conditions were compiled and analyzed to provide an expression-based enrichment search. A tool to search for functionally-related genes based on gene expression across these conditions is also provided. Other features include dynamic visualization of genes on KEGG pathway maps and batch gene identifier conversion.
- Research Organization:
- University of California, Los Angeles
- Sponsoring Organization:
- USDOE; USDOE Office of Energy Efficiency and Renewable Energy (EERE)
- DOE Contract Number:
- EE0003046
- OSTI ID:
- 1096239
- Report Number(s):
- DOE-DANF-0003046-R1; 28302-R
- Country of Publication:
- United States
- Language:
- English
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