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Permanent draft genome sequence of Dethiosulfovibrio peptidovorans type strain (SEBR 4207T)

Journal Article · · Standards in Genomic Sciences
DOI:https://doi.org/10.4056/sigs.1092865· OSTI ID:1043977
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  1. U.S. Department of Energy, Joint Genome Institute
  2. DSMZ - German Collection of Microorganisms and Cell Cultures GmbH, Braunschweig, Germany
  3. Los Alamos National Laboratory (LANL)
  4. ORNL
  5. Oak Ridge National Laboratory (ORNL)
  6. HZI - Helmholtz Centre for Infection Research, Braunschweig, Germany
+ Show Author Affiliations
Dethiosulfovibrio peptidovorans Magot et al. 1997 is the type species of the genus Dethiosulfovibrio of the family Synergistaceae in the recently created phylum Sysnergistetes. The strictly anaerobic, vibrio-shaped, thiosulfate-reducing bacterium utilizes only peptides and amino acids, but no sugars or fatty acids. It was isolated from an offshore oil well where it is supposed to be involved in pitting corrosion of mild steel. While initially (1997) described as a distantly related to the genus Thermoanaerobacter, but not assigned to any specific genus, it is meanwhile taxonomically established within the novel phylum Synergistetes. A large number of repeats on the distal portions of the main contig prevented an economically justifiable closure of the last gaps. This is already the third published genome from a member of the phylum Synergistetes. The 2,576,359 bp long genome consists of three contigs with 2,458 protein-coding and 59 RNA genes and is part of the Genomic Encyclopedia of Bacteria and Archaea project.
Research Organization:
Oak Ridge National Laboratory (ORNL)
Sponsoring Organization:
ORNL work for others
DOE Contract Number:
AC05-00OR22725
OSTI ID:
1043977
Journal Information:
Standards in Genomic Sciences, Journal Name: Standards in Genomic Sciences Journal Issue: 1 Vol. 3; ISSN 1944-3277
Country of Publication:
United States
Language:
English

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Related Subjects

02 PETROLEUM
AMINO ACIDS
BACTERIA
CARBOXYLIC ACIDS
CLOSURES
CONTIGS
GENES
OIL WELLS
PEPTIDES
PITTING CORROSION
RNA
SACCHARIDES
STRAINS