Skip to main content
U.S. Department of Energy
Office of Scientific and Technical Information

Complete genome sequence Methanothermus fervidus type strain (V24ST)

Journal Article · · Standards in Genomic Sciences
DOI:https://doi.org/10.4056/sigs.1283367· OSTI ID:1030628
Methanothermus fervidus Stetter 1982 is the type strain of the genus Methanothermus. This hyperthermophilic genus is of a thought to be endemic in Icelandic hot springs. M. fervidus was not only the first characterized organism with a maximal growth temperature (97 C) close to the boiling point of water, but also the first archaeon in which a detailed functional analysis of its histone protein was reported and the first one in which the function of 2,3-cyclodiphosphoglycerate in thermoadaptation was characterized. Strain V24ST is of interest because of its very low substrate ranges, it grows only on H2 + CO2. This is the first completed genome sequence of the family Methanothermaceae. Here we describe the features of this organism, together with the complete genome sequence and annotation. The 1,243,342 bp long genome with its 1,311 protein-coding and 50 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.
Research Organization:
Oak Ridge National Laboratory (ORNL)
Sponsoring Organization:
ORNL work for others
DOE Contract Number:
AC05-00OR22725
OSTI ID:
1030628
Journal Information:
Standards in Genomic Sciences, Journal Name: Standards in Genomic Sciences Journal Issue: 3 Vol. 3; ISSN 1944-3277
Country of Publication:
United States
Language:
English

References (48)

En route to a genome-based classification of Archaea and Bacteria? journal June 2010
[6] Triose-phosphate isomerase from Pyrococcus woesei and Methanothermus fervidus book January 2001
Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya. journal June 1990
IMG ER: a system for microbial genome annotation expert review and curation journal June 2009
The crystal structure of d-glyceraldehyde-3-phosphate dehydrogenase from the hyperthermophilic archaeon Methanothermus fervidus in the presence of NADP+ at 2.1 Å resolution journal March 2000
Greengenes, a Chimera-Checked 16S rRNA Gene Database and Workbench Compatible with ARB journal July 2006
Purification and characterization of d-glyceraldehyde-3-phosphate dehydrogenase from the thermophilic archaebacterium Methanothermus fervidus journal May 1987
Thermoadaptation of methanogenic bacteria by intracellular ion concentration journal January 1988
A phylogeny-driven genomic encyclopaedia of Bacteria and Archaea journal December 2009
The Genomes On Line Database (GOLD) in 2007: status of genomic and metagenomic projects and their associated metadata journal December 2007
Selection of Conserved Blocks from Multiple Alignments for Their Use in Phylogenetic Analysis journal April 2000
Methanothermus sociabilis sp. nov., a Second Species within the Methanothermaceae Growing at 97°C journal July 1986
Velvet: Algorithms for de novo short read assembly using de Bruijn graphs journal February 2008
Hyperthermophilic procaryotes journal May 1996
The All-Species Living Tree project: A 16S rRNA-based phylogenetic tree of all sequenced type strains journal September 2008
The Genome Sequence of Methanosphaera stadtmanae Reveals Why This Human Intestinal Archaeon Is Restricted to Methanol and H2 for Methane Formation and ATP Synthesis journal December 2005
A novel ether core lipid with H-shaped C80-isoprenoid hydrocarbon chain from the hyperthermophilic methanogen Methanothermus fervidus journal February 1998
A Rapid Bootstrap Algorithm for the RAxML Web Servers journal October 2008
The nomenclatural types of the orders Acholeplasmatales, Halanaerobiales, Halobacteriales, Methanobacteriales, Methanococcales, Methanomicrobiales, Planctomycetales, Prochlorales, Sulfolobales, Thermococcales, Thermoproteales and Verrucomicrobiales are the genera Acholeplasma, Halanaerobium, Halobacterium, Methanobacterium, Methanococcus, Methanomicrobium, Planctomyces, Prochloron, Sulfolobus, Thermococcus, Thermoproteus and Verrucomicrobium, respectively. Opinion 79 journal January 2005
GenePRIMP: a gene prediction improvement pipeline for prokaryotic genomes journal May 2010
[6] Triose-phosphate isomerase from Pyrococcus woesei and Methanothermus fervidus book January 2001
Hyperthermophilic microorganisms journal June 1990
The minimum information about a genome sequence (MIGS) specification journal May 2008
Biosynthesis of cyclic 2,3-diphosphoglycerate: Isolation and characterization of 2-phosphoglycerate kinase and cyclic 2,3-diphosphoglycerate synthetase from journal October 1990
Complete genome sequence of Kytococcus sedentarius type strain (541T) journal July 2009
The complete genome sequence of the hyperthermophilic, sulphate-reducing archaeon Archaeoglobus fulgidus journal November 1997
Ether polar lipids of methanogenic bacteria: structures, comparative aspects, and biosyntheses journal March 1993
HMf, a DNA-binding protein isolated from the hyperthermophilic archaeon Methanothermus fervidus, is most closely related to histones. journal August 1990
Ether polar lipids of methanogenic bacteria: structures, comparative aspects, and biosyntheses. journal January 1993
Biosynthesis of cyclic 2,3-diphosphoglycerate: Isolation and characterization of 2-phosphoglycerate kinase and cyclic 2,3-diphosphoglycerate synthetase from journal October 1990
Gene Ontology: tool for the unification of biology journal May 2000
Multiple sequence alignment using partial order graphs journal March 2002
How Many Bootstrap Replicates Are Necessary? journal March 2010
Genes encoding the 7S RNA and tRNASer are linked to one of the two rRNA operons in the genome of the extremely thermophilic archaebacterium Methanothermus fervidus journal May 1990
Complete Genome Sequence of the Methanogenic Archaeon, Methanococcus jannaschii journal August 1996
Genes encoding the 7S RNA and tRNASer are linked to one of the two rRNA operons in the genome of the extremely thermophilic archaebacterium Methanothermus fervidus journal May 1990
Methanogens: reevaluation of a unique biological group. journal January 1979
Validation of the Publication of New Names and New Combinations Previously Effectively Published Outside the IJSB: List No. 8 journal April 1982
How Many Bootstrap Replicates Are Necessary? book January 2009
Methanothermus sociabilis sp. nov., a Second Species within the Methanothermaceae Growing at 97°C journal July 1986
Identification of a novel cancer microbiome signature for predicting prognosis of human breast cancer patients journal November 2021
The Genome Sequence of the Rumen Methanogen Methanobrevibacter ruminantium Reveals New Possibilities for Controlling Ruminant Methane Emissions journal January 2010
The Genome Sequence of Methanosphaera stadtmanae Reveals Why This Human Intestinal Archaeon Is Restricted to Methanol and H2 for Methane Formation and ATP Synthesis journal December 2005
Greengenes, a Chimera-Checked 16S rRNA Gene Database and Workbench Compatible with ARB journal July 2006
Prodigal: prokaryotic gene recognition and translation initiation site identification journal March 2010
Methanogens: reevaluation of a unique biological group. journal January 1979
Validation of the Publication of New Names and New Combinations Previously Effectively Published Outside the IJSB: List No. 6 journal April 1981
A novel ether core lipid with H-shaped C80-isoprenoid hydrocarbon chain from the hyperthermophilic methanogen Methanothermus fervidus journal February 1998

Cited By (1)

Autocatalytic chemical networks preceded proteins and RNA in evolution posted_content July 2019

Similar Records

Complete genome sequence of Methanothermus fervidus type strain (V24ST)
Journal Article · Thu Dec 30 19:00:00 EST 2010 · Standards in Genomic Sciences · OSTI ID:1511323

Complete genome sequence of Archaeoglobus profundus type strain (AV18T)
Journal Article · Thu Dec 31 23:00:00 EST 2009 · Standards in Genomic Sciences · OSTI ID:1043957

Complete genome sequence of Ignisphaera aggregans type strain (AQ1.S1T)
Journal Article · Thu Dec 31 23:00:00 EST 2009 · Standards in Genomic Sciences · OSTI ID:1043975