Complete genome sequence of Thermanaerovibrio acidaminovorans type strain (Su883T)

Journal Article · Thu Jan 01 00:00:00 EST 2009 · Standards in Genomic Sciences

DOI:https://doi.org/10.4056/sigs.40645· OSTI ID:1018284

Chovatia, Mansi ^[1]; Sikorski, Johannes ^[2]; Schroder, Maren ^[2]; Lapidus, Alla L ^[1]; Nolan, Matt ^[1]; Tice, Hope ^[1]; Glavina Del Rio, Tijana ^[1]; Copeland, A ^[1]; Cheng, Jan-Fang ^[1]; Lucas, Susan ^[1]; Chen, Feng ^[1]; Bruce, David ^[3]; Goodwin, Lynne A ^[3]; Pitluck, Sam ^[1]; Ivanova, N ^[1]; Mavromatis, K ^[1]; Ovchinnikova, Galina ^[1]; Pati, Amrita ^[1]; Chen, Amy ^[1]; Palaniappan, Krishna ^[1] ; Land, Miriam L ^[4]; Hauser, Loren John ^[4]; Chang, Yun-Juan ^[4]; Jeffries, Cynthia ^[5]; Chain, Patrick S. G. ^[6]; Saunders, Elizabeth H ^[3]; Detter, J C ^[1]; Rohde, Manfred ^[7]; Goker, Markus ^[2]; Spring, Stefan ^[2]; Bristow, James ^[1]; Markowitz, Victor ^[1]; Hugenholtz, Philip ^[1]; Kyrpides, Nikos C ^[1]; Klenk, Hans-Peter ^[2]; Eisen, Jonathan ^[1]

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1. U.S. Department of Energy, Joint Genome Institute
2. DSMZ - German Collection of Microorganisms and Cell Cultures GmbH, Braunschweig, Germany
3. Los Alamos National Laboratory (LANL)
4. ORNL
5. Oak Ridge National Laboratory (ORNL)
6. Lawrence Livermore National Laboratory (LLNL)
7. HZI - Helmholtz Centre for Infection Research, Braunschweig, Germany

Thermanaerovibrio acidaminovorans (Guangsheng et al. 1997) Baena et al. 1999 is the type species of the genus Thermanaerovibrio and is of phylogenetic interest because of the very isolated location of the novel phylum Synergistetes. T. acidaminovorans Su883T is a Gram-negative, motile, non-spore-forming bacterium isolated from an anaerobic reactor of a sugar refinery in The Netherlands. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first completed genome sequence from a member of the phylum Synergistetes. The 1,848,474 bp long single replicon genome with its 1765 protein-coding and 60 RNA genes is part of the Genomic Encyclopedia of Bac-teria and Archaea project.

• Research Organization: Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States)
• Sponsoring Organization: Work for Others (WFO)
• DOE Contract Number: DE-AC05-00OR22725
• OSTI ID: 1018284
• Journal Information: Standards in Genomic Sciences, Vol. 1, Issue 3; ISSN 1944--3277
• Country of Publication: United States
• Language: English

Related Subjects

59 BASIC BIOLOGICAL SCIENCES
99 GENERAL AND MISCELLANEOUS//MATHEMATICS, COMPUTING, AND INFORMATION SCIENCE
BACTERIA
GENES
NETHERLANDS
REMOTE AREAS
REPLICONS
RNA
SACCHAROSE
STRAINS
strictly anaerobic
amino acid fermentation
thermophile
oxidative decarboxyla-tion
lithotrophic
co-culture with Methanobacterium thermoautotrophicum
Synergistales
Synergistetes