An annotated database of Arabidopsis mutants of acyl lipid metabolism

McGlew, Kathleen; Shaw, Vincent; Zhang, Meng; Kim, Ryeo Jin; Yang, Weili; Shorrosh, Basil; Suh, Mi Chung; Ohlrogge, John

doi:10.1007/s00299-014-1710-8

Title: An annotated database of Arabidopsis mutants of acyl lipid metabolism

Journal Article · Wed Dec 10 00:00:00 EST 2014 · Plant Cell Reports

DOI:https://doi.org/10.1007/s00299-014-1710-8· OSTI ID:1343434

McGlew, Kathleen ^[1]; Shaw, Vincent ^[1]; Zhang, Meng ^[2]; Kim, Ryeo Jin ^[3]; Yang, Weili ^[1]; Shorrosh, Basil ^[4]; Suh, Mi Chung ^[3]; Ohlrogge, John ^[1]

Michigan State Univ., East Lansing, MI (United States). Dept. of Plant Biology
Northwest A&F Univ., Yangling (China). College of Agronomy
Chonnam National Univ., Gwangju (Korea, Republic of). Dept. of Bioenergy Science and Technology
Fort Collins, CO (United States)

Mutants have played a fundamental role in gene discovery and in understanding the function of genes involved in plant acyl lipid metabolism. The first mutant in Arabidopsis lipid metabolism (fad4) was described in 1985. Since that time, characterization of mutants in more than 280 genes associated with acyl lipid metabolism has been reported. This review provides a brief background and history on identification of mutants in acyl lipid metabolism, an analysis of the distribution of mutants in different areas of acyl lipid metabolism and presents an annotated database (ARALIPmutantDB) of these mutants. The database provides information on the phenotypes of mutants, pathways and enzymes/proteins associated with the mutants, and allows rapid access via hyperlinks to summaries of information about each mutant and to literature that provides information on the lipid composition of the mutants. Mutants for at least 30 % of the genes in the database have multiple names, which have been compiled here to reduce ambiguities in searches for information. Furthermore, the database should also provide a tool for exploring the relationships between mutants in acyl lipid-related genes and their lipid phenotypes and point to opportunities for further research.

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Research Organization:: Michigan State Univ., East Lansing, MI (United States)

Sponsoring Organization:: USDOE Office of Science (SC), Biological and Environmental Research (BER)

Contributing Organization:: Northwest A&F Univ., Yangling (China); Chonnam National Univ., Gwangju (Korea, Republic of)

Grant/Contract Number:: FC02-07ER64494

OSTI ID:: 1343434

Journal Information:: Plant Cell Reports, Vol. 34, Issue 4; ISSN 0721-7714

Country of Publication:: United States

Language:: English

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Cited by: 156 works

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