skip to main content
OSTI.GOV title logo U.S. Department of Energy
Office of Scientific and Technical Information

Title: New Member of the V1V2-Directed CAP256-VRC26 Lineage That Shows Increased Breadth and Exceptional Potency

Journal Article · · Journal of Virology
DOI:https://doi.org/10.1128/JVI.01791-15· OSTI ID:1242300
 [1];  [2];  [1];  [3];  [1];  [1];  [1];  [1];  [1];  [1];  [1];  [1];  [1];  [1];  [4];  [1];  [1];  [1];  [1];  [1] more »;  [1];  [1];  [1];  [1];  [2];  [5];  [6];  [3];  [1];  [7];  [7];  [1] « less
  1. National Inst. of Health (NIH), Bethesda, MD (United States)
  2. National Inst. for Communicable Diseases of the National Health Lab. Services, Johannesburg (South Africa); Univ. of Witwatersrand, Johannesburg (South Africa)
  3. Columbia Univ., New York, NY (United States)
  4. Univ. of KwaZulu Natal, Durban (South Africa)
  5. Duke Univ., Durham, NC (United States)
  6. Univ. of KwaZulu Natal, Durban (South Africa); Columbia Univ., New York, NY (United States)
  7. National Inst. for Communicable Diseases of the National Health Lab. Services, Johannesburg (South Africa); Univ. of Witwatersrand, Johannesburg (South Africa); Univ. of KwaZulu Natal, Durban (South Africa)

The epitopes defined by HIV-1 broadly neutralizing antibodies (bNAbs) are valuable templates for vaccine design, and studies of the immunological development of these antibodies are providing insights for vaccination strategies. In addition, the most potent and broadly reactive of these bNAbs have potential for clinical use. We previously described a family of 12 V1V2-directed neutralizing antibodies, CAP256-VRC26, isolated from an HIV-1 clade C-infected donor at years 1, 2, and 4 of infection (N. A. Doria-Rose et al., Nature 509:55–62, 2014, http://dx.doi.org/10.1038/nature13036). Here, we report on the isolation and characterization of new members of the family mostly obtained at time points of peak serum neutralization breadth and potency. Thirteen antibodies were isolated from B cell culture, and eight were isolated using trimeric envelope probes for differential single B cell sorting. One of the new antibodies displayed a 10-fold greater neutralization potency than previously published lineage members. This antibody, CAP256-VRC26.25, neutralized 57% of diverse clade viral isolates and 70% of clade C isolates with remarkable potency. Among the viruses neutralized, the median 50% inhibitory concentration was 0.001 μg/ml. All 33 lineage members targeted a quaternary epitope focused on V2. While all known bNAbs targeting the V1V2 region interact with the N160 glycan, the CAP256-VRC26 antibodies showed an inverse correlation of neutralization potency with dependence on this glycan. Overall, our results highlight the ongoing evolution within a single antibody lineage and describe more potent and broadly neutralizing members with potential clinical utility, particularly in areas where clade C is prevalent. Studies of HIV-1 broadly neutralizing antibodies (bNAbs) provide valuable information for vaccine design, and the most potent and broadly reactive of these bNAbs have potential for clinical use. We previously described a family of V1V2-directed neutralizing antibodies from an HIV-1 clade C-infected donor. Here, we report on the isolation and characterization of new members of the family mostly obtained at time points of peak serum neutralization breadth and potency. One of the new antibodies, CAP256-VRC26.25, displayed a 10-fold greater neutralization potency than previously described lineage members. It neutralized 57% of diverse clade viral isolates and 70% of clade C isolates with remarkable potency: the median 50% inhibitory concentration was 0.001 μg/ml. Furthermore, our results highlight the ongoing evolution within a single antibody lineage and describe more potent and broadly neutralizing members with potential clinical utility, particularly in areas where clade C is prevalent.

Research Organization:
Argonne National Laboratory (ANL), Argonne, IL (United States)
Sponsoring Organization:
USDOE Office of Science (SC), Basic Energy Sciences (BES); National Inst. of Health; South African Medical Research Council; Wellcome Trust
Grant/Contract Number:
W-31-109-Eng-38; AI116086-01; D1407250-01; 089933/Z/09/Z; U19 AI51794; 5 D43TW000231
OSTI ID:
1242300
Journal Information:
Journal of Virology, Vol. 90, Issue 1; ISSN 0022-538X
Publisher:
American Society for MicrobiologyCopyright Statement
Country of Publication:
United States
Language:
ENGLISH
Citation Metrics:
Cited by: 160 works
Citation information provided by
Web of Science

References (66)

Structure and immune recognition of trimeric pre-fusion HIV-1 Env journal October 2014
Broadly neutralizing antibodies and the search for an HIV-1 vaccine: the end of the beginning journal August 2013
Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data journal April 2012
Broad and potent neutralization of HIV-1 by a gp41-specific human antibody journal September 2012
Structure of HIV-1 gp120 V1/V2 domain with broadly neutralizing antibody PG9 journal November 2011
Broad and potent HIV-1 neutralization by a human antibody that binds the gp41–gp120 interface journal September 2014
Structural basis for diverse N-glycan recognition by HIV-1–neutralizing V1–V2–directed antibody PG16 journal May 2013
Broad neutralization coverage of HIV by multiple highly potent antibodies journal September 2011
Efficient generation of monoclonal antibodies from single human B cells by single cell RT-PCR and expression vector cloning journal January 2008
Potent and Broad Neutralization of HIV-1 Subtype C by Plasma Antibodies Targeting a Quaternary Epitope Including Residues in the V2 Loop journal January 2011
HIV-1 neutralizing antibodies: understanding nature's pathways journal June 2013
Delineating Antibody Recognition in Polyclonal Sera from Patterns of HIV-1 Isolate Neutralization journal May 2013
Human Immunodeficiency Virus Type 1 Elite Neutralizers: Individuals with Broad and Potent Neutralizing Activity Identified by Using a High-Throughput Neutralization Assay together with an Analytical Selection Algorithm journal May 2009
The V1/V2 Domain of gp120 Is a Global Regulator of the Sensitivity of Primary Human Immunodeficiency Virus Type 1 Isolates to Neutralization by Antibodies Commonly Induced upon Infection journal April 2004
Sequence and Structural Convergence of Broad and Potent HIV Antibodies That Mimic CD4 Binding journal July 2011
Analysis of a Clonal Lineage of HIV-1 Envelope V2/V3 Conformational Epitope-Specific Broadly Neutralizing Antibodies and Their Inferred Unmutated Common Ancestors journal July 2011
Establishing a Cohort at High Risk of HIV Infection in South Africa: Challenges and Experiences of the CAPRISA 002 Acute Infection Study journal April 2008
Breadth of Human Immunodeficiency Virus-Specific Neutralizing Activity in Sera: Clustering Analysis and Association with Clinical Variables journal November 2009
The Neutralization Breadth of HIV-1 Develops Incrementally over Four Years and Is Associated with CD4+ T Cell Decline and High Viral Load during Acute Infection journal March 2011
Prospects for a globally effective HIV-1 vaccine journal November 2015
A Next-Generation Cleaved, Soluble HIV-1 Env Trimer, BG505 SOSIP.664 gp140, Expresses Multiple Epitopes for Broadly Neutralizing but Not Non-Neutralizing Antibodies journal September 2013
Crystal Structure of a Soluble Cleaved HIV-1 Envelope Trimer journal October 2013
Cryo-EM Structure of a Fully Glycosylated Soluble Cleaved HIV-1 Envelope Trimer journal October 2013
Clustering of highly homologous sequences to reduce the size of large protein databases journal March 2001
Recent developments in the PHENIX software for automated crystallographic structure determination journal November 2003
Recombinant HIV envelope trimer selects for quaternary-dependent antibodies targeting the trimer apex journal November 2014
Rational Design of Envelope Identifies Broadly Neutralizing Human Monoclonal Antibodies to HIV-1 journal July 2010
High-throughput isolation of immunoglobulin genes from single human B cells and expression as monoclonal antibodies journal June 2009
Maturation and Diversity of the VRC01-Antibody Lineage over 15 Years of Chronic HIV-1 Infection journal April 2015
Asymmetric recognition of the HIV-1 trimer by broadly neutralizing antibody PG9 journal February 2013
Co-evolution of a broadly neutralizing HIV-1 antibody and founder virus journal April 2013
Strategies to guide the antibody affinity maturation process journal April 2015
UCSF Chimera?A visualization system for exploratory research and analysis journal January 2004
Viral variants that initiate and drive maturation of V1V2-directed HIV-1 broadly neutralizing antibodies journal October 2015
WebLogo: A Sequence Logo Generator journal May 2004
Cleavage-Independent HIV-1 Env Trimers Engineered as Soluble Native Spike Mimetics for Vaccine Design journal April 2015
Antibody responses to envelope glycoproteins in HIV-1 infection journal May 2015
A Limited Number of Antibody Specificities Mediate Broad and Potent Serum Neutralization in Selected HIV-1 Infected Individuals journal August 2010
Variable Loop Glycan Dependency of the Broad and Potent HIV-1-Neutralizing Antibodies PG9 and PG16 journal August 2010
Multiple Pathways of Escape from HIV Broadly Cross-Neutralizing V2-Dependent Antibodies journal February 2013
Incomplete Neutralization and Deviation from Sigmoidal Neutralization Curves for HIV Broadly Neutralizing Monoclonal Antibodies journal August 2015
Broad and Potent Neutralizing Antibodies from an African Donor Reveal a New HIV-1 Vaccine Target journal September 2009
The Antibody Response against HIV-1 journal November 2011
Cardiolipin Polyspecific Autoreactivity in Two Broadly Neutralizing HIV-1 Antibodies journal June 2005
Antibodies in HIV-1 Vaccine Development and Therapy journal September 2013
Efficient protein boosting after plasmid DNA or recombinant adenovirus immunization with HIV-1 vaccine constructs journal February 2007
Isolation of human monoclonal antibodies from peripheral blood B cells journal September 2013
Factors Associated with the Development of Cross-Reactive Neutralizing Antibodies during Human Immunodeficiency Virus Type 1 Infection journal November 2008
B-cell–lineage immunogen design in vaccine development with HIV-1 as a case study journal May 2012
Immunotypes of a Quaternary Site of HIV-1 Vulnerability and Their Recognition by Antibodies journal February 2011
Human Antibodies that Neutralize HIV-1: Identification, Structures, and B Cell Ontogenies journal September 2012
Prevalence of broadly neutralizing antibody responses during chronic HIV-1 infection journal January 2014
Developmental pathway for potent V1V2-directed HIV-neutralizing antibodies journal March 2014
FastML: a web server for probabilistic reconstruction of ancestral sequences journal May 2012
IL-21-Induced Isotype Switching to IgG and IgA by Human Naive B Cells Is Differentially Regulated by IL-4 journal July 2008
High throughput HIV-1 microneutralization assay journal September 2013
A Short Segment of the HIV-1 gp120 V1/V2 Region Is a Major Determinant of Resistance to V1/V2 Neutralizing Antibodies journal May 2012
[20] Processing of X-ray diffraction data collected in oscillation mode book January 1997
Redesigned HIV antibodies exhibit enhanced neutralizing potency and breadth journal May 2015
Prospects for a Globally Effective HIV-1 Vaccine journal December 2015
Structure and immune recognition of trimeric pre-fusion HIV-1 Env text January 2014
Co-evolution of a broadly neutralizing HIV-1 antibody and founder virus text January 2013
FastML: a web server for probabilistic reconstruction of ancestral sequences text January 2012
The Neutralization Breadth of HIV-1 Develops Incrementally over Four Years and Is Associated with CD4+ T Cell Decline and High Viral Load during Acute Infection text January 2011
Factors Associated with the Development of Cross-Reactive Neutralizing Antibodies during Human Immunodeficiency Virus Type 1 Infection journal May 2009
Potent and Broad Neutralization of HIV-1 Subtype C by Plasma Antibodies Targeting a Quaternary Epitope Including Residues in the V2 Loop text January 2011

Cited By (31)

Characterization of AEBSF-antibody modifications for a protease inhibitor supplementation strategy journal August 2019
Structures of HIV-1 Env V1V2 with broadly neutralizing antibodies reveal commonalities that enable vaccine design journal December 2015
Antibody responses to viral infections: a structural perspective across three different enveloped viruses journal March 2019
Strategies for inducing effective neutralizing antibody responses against HIV-1 journal November 2019
Native-like Env trimers as a platform for HIV-1 vaccine design journal January 2017
The HIV-1 envelope glycoprotein structure: nailing down a moving target journal January 2017
Antibody-virus co-evolution in HIV infection: paths for HIV vaccine development journal January 2017
Fusion peptide of HIV-1 as a site of vulnerability to neutralizing antibody journal May 2016
Positive Selection at Key Residues in the HIV Envelope Distinguishes Broad and Strain-Specific Plasma Neutralizing Antibodies journal December 2018
Molecular Basis of Unusually High Neutralization Resistance in Tier 3 HIV-1 Strain 253-11 journal April 2018
A Bispecific Antibody That Simultaneously Recognizes the V2- and V3-Glycan Epitopes of the HIV-1 Envelope Glycoprotein Is Broader and More Potent than Its Parental Antibodies journal January 2020
Unique binding modes for the broad neutralizing activity of single-chain variable fragments (scFv) targeting CD4-induced epitopes journal September 2017
Broadly neutralizing antibodies: What is needed to move from a rare event in HIV-1 infection to vaccine efficacy? journal July 2018
Engineering and characterising a novel, highly potent bispecific antibody iMab-CAP256 that targets HIV-1 journal November 2019
Glycoengineering HIV-1 Env creates ‘supercharged’ and ‘hybrid’ glycans to increase neutralizing antibody potency, breadth and saturation journal May 2018
IgG3 enhances neutralization potency and Fc effector function of an HIV V2-specific broadly neutralizing antibody journal December 2019
Beyond Hot Spots: Biases in Antibody Somatic Hypermutation and Implications for Vaccine Design journal August 2018
Impact of HIV-1 Diversity on Its Sensitivity to Neutralization journal July 2019
Sequencing HIV-neutralizing antibody exons and introns reveals detailed aspects of lineage maturation journal October 2018
Recent progress in broadly neutralizing antibodies to HIV journal October 2018
Use of broadly neutralizing antibodies for HIV-1 prevention journal January 2017
Tfh cells and HIV bnAbs, an immunodominance model of the HIV neutralizing antibody generation problem journal January 2017
Neutralization Breadth and Potency of Single-Chain Variable Fragments Derived from Broadly Neutralizing Antibodies Targeting Multiple Epitopes on the HIV-1 Envelope journal October 2019
HIV-1 Glycan Density Drives the Persistence of the Mannose Patch within an Infected Individual journal October 2016
Potential of conventional & bispecific broadly neutralizing antibodies for prevention of HIV-1 subtype A, C & D infections journal March 2018
Somatic hypermutation to counter a globally rare viral immunotype drove off-track antibodies in the CAP256-VRC26 HIV-1 V2-directed bNAb lineage journal September 2019
Mimicry of an HIV broadly neutralizing antibody epitope with a synthetic glycopeptide text January 2017
Exploiting B Cell Receptor Analyses to Inform on HIV-1 Vaccination Strategies journal January 2020
Phenotypic deficits in the HIV-1 envelope are associated with the maturation of a V2-directed broadly neutralizing antibody lineage text January 2018
Broadly neutralizing antibodies: What is needed to move from a rare event in HIV-1 infection to vaccine efficacy? text January 2018
Phenotypic deficits in the HIV-1 envelope are associated with the maturation of a V2-directed broadly neutralizing antibody lineage journal January 2018

Similar Records

Related Subjects