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Title: The DOE Bioenergy Research Centers: History, Operations, and Scientific Output

Journal Article · · BioEnergy Research
 [1];  [2];  [3];  [4];  [2];  [3]
  1. Univ. of Wisconsin, Madison, WI (United States); WinnowGen, Inc., Madison, WI (United States); Midwestern BioAg, Madison, WI (United States)
  2. Joint BioEnergy Inst. (JBEI), Lawrence Berkeley National Laboratory (LBNL), Emeryville, CA (United States)
  3. Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States). BioEnergy Science Center (BESC)
  4. Univ. of Wisconsin, Madison, WI (United States); Midwestern BioAg, Madison, WI (United States)

Over the past 7 years, the US Department of Energy's Office of Biological and Environmental Research has funded three Bioenergy Research Centers (BRCs). These centers have developed complementary and collaborative research portfolios that address the key technical and economic challenges in biofuel production from lignocellulosic biomass. All three centers have established a close, productive relationship with DOE's Joint Genome Institute (JGI). This special issue of Bioenergy Research samples the breadth of basic science and engineering work required to underpin a diverse, sustainable, and robust biofuel industry. In this report, which was collaboratively produced by all three BRCs, we discuss the BRC contributions over their first 7 years to the development of renewable transportation fuels. In additon, we also highlight the BRC research published in the current issue and discuss technical challenges in light of recent progress.

Research Organization:
Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States)
Sponsoring Organization:
USDOE Office of Science (SC), Biological and Environmental Research (BER)
Grant/Contract Number:
AC05-00OR22725; FC02-07ER64494; AC02-05CH11231
OSTI ID:
1327633
Journal Information:
BioEnergy Research, Vol. 8, Issue 3; ISSN 1939-1234
Publisher:
SpringerCopyright Statement
Country of Publication:
United States
Language:
English
Citation Metrics:
Cited by: 9 works
Citation information provided by
Web of Science

References (84)

How biotech can transform biofuels journal February 2008
Bioenergy research: a new paradigm in multidisciplinary research journal April 2010
Biocommodity Engineering journal October 1999
Nanostructure‐Initiator Mass Spectrometry (NIMS) for the Analysis of Enzyme Activities journal June 2012
High throughput nanostructure-initiator mass spectrometry screening of microbial growth conditions for maximal β-glucosidase production journal January 2013
Rapid Kinetic Characterization of Glycosyl Hydrolases Based on Oxime Derivatization and Nanostructure-Initiator Mass Spectrometry (NIMS) journal May 2014
Phylogenomically Guided Identification of Industrially Relevant GH1 β-Glucosidases through DNA Synthesis and Nanostructure-Initiator Mass Spectrometry journal July 2014
Life Cycle Assessment of Switchgrass Cellulosic Ethanol Production in the Wisconsin and Michigan Agricultural Contexts journal April 2015
Enhancement of Switchgrass (Panicum virgatum L.) Biomass Production under Drought Conditions by the Ectomycorrhizal Fungus Sebacina vermifera journal August 2011
Population genomics of Populus trichocarpa identifies signatures of selection and adaptive trait associations journal August 2014
Monolignol Ferulate Transferase Introduces Chemically Labile Linkages into the Lignin Backbone journal April 2014
Engineering of a high-throughput screening system to identify cellulosic biomass, pretreatments, and enzyme formulations that enhance sugar release journal February 2010
Enhanced characteristics of genetically modified switchgrass (Panicum virgatum L.) for high biofuel production journal January 2013
Genetic manipulation of lignin reduces recalcitrance and improves ethanol production from switchgrass journal February 2011
Downregulation of GAUT12 in Populus deltoides by RNA silencing results in reduced recalcitrance, increased growth and reduced xylan and pectin in a woody biofuel feedstock journal January 2015
Deletion of a gene cluster encoding pectin degrading enzymes in Caldicellulosiruptor bescii reveals an important role for pectin in plant biomass recalcitrance journal October 2014
Field Evaluation of Transgenic Switchgrass Plants Overexpressing PvMYB4 for Reduced Biomass Recalcitrance journal January 2015
Systems and synthetic biology approaches to alter plant cell walls and reduce biomass recalcitrance journal November 2014
High-resolution genetic mapping of allelic variants associated with cell wall chemistry in Populus journal January 2015
Reference genome sequence of the model plant Setaria journal May 2012
Development of an integrated transcript sequence database and a gene expression atlas for gene discovery and analysis in switchgrass ( Panicum virgatum L.) journal February 2013
Loss-of-Function Mutation of REDUCED WALL ACETYLATION2 in Arabidopsis Leads to Reduced Cell Wall Acetylation and Increased Resistance to Botrytis cinerea journal January 2011
Identification of a Xylogalacturonan Xylosyltransferase Involved in Pectin Biosynthesis in Arabidopsis journal May 2008
An Integrative Approach to the Identification of Arabidopsis and Rice Genes Involved in Xylan and Secondary Wall Development journal November 2010
Mannan synthase activity in the CSLD family journal October 2011
The Cooperative Activities of CSLD2, CSLD3, and CSLD5 Are Required for Normal Arabidopsis Development journal November 2011
The plant glycosyltransferase clone collection for functional genomics journal July 2014
Analysis of the Arabidopsis Cytosolic Proteome Highlights Subcellular Partitioning of Central Plant Metabolism journal April 2011
The Interconversion of UDP-Arabinopyranose and UDP-Arabinofuranose Is Indispensable for Plant Development in Arabidopsis journal April 2011
Biosynthesis and incorporation of side-chain-truncated lignin monomers to reduce lignin polymerization and enhance saccharification: Reduction in lignin DP enhances saccharification journal March 2012
Overexpression of a BAHD Acyltransferase, OsAt10 , Alters Rice Cell Wall Hydroxycinnamic Acid Content and Saccharification journal February 2013
Multifunctional cellulase, xylanase, mannanase journal January 2017
Comparison of dilute acid and ionic liquid pretreatment of switchgrass: Biomass recalcitrance, delignification and enzymatic saccharification journal July 2010
Influence of physico-chemical changes on enzymatic digestibility of ionic liquid and AFEX pretreated corn stover journal July 2011
A facile method for the recovery of ionic liquid and lignin from biomass pretreatment journal January 2011
Glycoside Hydrolase Activities of Thermophilic Bacterial Consortia Adapted to Switchgrass journal July 2011
Colloid-based multiplexed screening for plant biomass-degrading glycoside hydrolase activities in microbial communities journal January 2011
Techno-economic analysis of a lignocellulosic ethanol biorefinery with ionic liquid pre-treatment journal June 2011
One-pot ionic liquid pretreatment and saccharification of switchgrass journal January 2013
Understanding cost drivers and economic potential of two variants of ionic liquid pretreatment for cellulosic biofuel production journal January 2014
Efficient biomass pretreatment using ionic liquids derived from lignin and hemicellulose journal August 2014
Discovery and characterization of ionic liquid-tolerant thermophilic cellulases from a switchgrass-adapted microbial community journal January 2014
Discovery of Microorganisms and Enzymes Involved in High-Solids Decomposition of Rice Straw Using Metagenomic Analyses journal October 2013
Recent progress in consolidated bioprocessing journal June 2012
Thermophilic lignocellulose deconstruction journal May 2014
Methylation by a Unique α-class N4-Cytosine Methyltransferase Is Required for DNA Transformation of Caldicellulosiruptor bescii DSM6725 journal August 2012
Clostridium thermocellum ATCC27405 transcriptomic, metabolomic and proteomic profiles after ethanol stress journal January 2012
Mutant selection and phenotypic and genetic characterization of ethanol-tolerant strains of Clostridium thermocellum journal August 2011
Mutant alcohol dehydrogenase leads to improved ethanol tolerance in Clostridium thermocellum journal August 2011
Carbohydrate and lignin are simultaneously solubilized from unpretreated switchgrass by microbial action at high temperature journal January 2013
Revealing Nature's Cellulase Diversity The Digestion Mechanism of Caldicellulosiruptor bescii CelA journal December 2013
Fungal cellulases and complexed cellulosomal enzymes exhibit synergistic mechanisms in cellulose deconstruction journal January 2013
Interactions of Endoglucanases with Amorphous Cellulose Films Resolved by Neutron Reflectometry and Quartz Crystal Microbalance with Dissipation Monitoring journal May 2012
A comparative study of ethanol production using dilute acid, ionic liquid and AFEX™ pretreated corn stover journal January 2014
Metabolic Engineering of Clostridium cellulolyticum for Production of Isobutanol from Cellulose journal March 2011
Consolidated bioprocessing of transgenic switchgrass by an engineered and evolved Clostridium thermocellum strain journal January 2014
Metabolic engineering of Saccharomyces cerevisiae for production of fatty acid-derived biofuels and chemicals journal January 2014
Engineering of Bacterial Methyl Ketone Synthesis for Biofuels journal October 2011
Identification and microbial production of a terpene-based advanced biofuel journal September 2011
Metabolic engineering of Escherichia coli for limonene and perillyl alcohol production journal September 2013
The Synthetic Biology Open Language (SBOL) provides a community standard for communicating designs in synthetic biology journal June 2014
PR-PR: Cross-Platform Laboratory Automation System journal January 2014
Dissecting a complex chemical stress: chemogenomic profiling of plant hydrolysates journal January 2013
Complex Physiology and Compound Stress Responses during Fermentation of Alkali-Pretreated Corn Stover Hydrolysate by an Escherichia coli Ethanologen journal March 2012
Death by a thousand cuts: the challenges and diverse landscape of lignocellulosic hydrolysate inhibitors journal March 2014
Correcting direct effects of ethanol on translation and transcription machinery confers ethanol tolerance in bacteria journal June 2014
Conversion of biomass to sugars via ionic liquid hydrolysis: process synthesis and economic evaluation journal May 2012
Simulated Moving Bed Chromatography: Separation and Recovery of Sugars and Ionic Liquid from Biomass Hydrolysates journal August 2013
Direct conversion of cellulose to levulinic acid and gamma-valerolactone using solid acid catalysts journal January 2013
Production of Biofuels from Cellulose and Corn Stover Using Alkylphenol Solvents journal June 2011
Integrated conversion of hemicellulose and cellulose from lignocellulosic biomass journal January 2013
A lignocellulosic ethanol strategy via nonenzymatic sugar production: Process synthesis and analysis journal April 2015
Targeted chemical upgrading of lignocellulosic biomass to platform molecules journal January 2014
A strategy for the simultaneous catalytic conversion of hemicellulose and cellulose from lignocellulosic biomass to liquid transportation fuels journal January 2014
Exploring bacterial lignin degradation journal April 2014
Pathways for degradation of lignin in bacteria and fungi journal January 2011
Evidence supporting dissimilatory and assimilatory lignin degradation in Enterobacter lignolyticus SCF1 journal January 2013
Chemoselective Metal-Free Aerobic Alcohol Oxidation in Lignin journal April 2013
Formic-acid-induced depolymerization of oxidized lignin to aromatics journal November 2014
Naturally p-Hydroxybenzoylated Lignins in Palms journal February 2015
High-Throughput Method for Determining the Sugar Content in Biomass with Pyrolysis Molecular Beam Mass Spectrometry journal April 2015
An Investigation on the Economic Feasibility of Macroalgae as a Potential Feedstock for Biorefineries journal March 2015
Comparison of enzymatic reactivity of corn stover solids prepared by dilute acid, AFEX™, and ionic liquid pretreatments journal January 2014
Biomass as feedstock for a bioenergy and bioproducts industry: The technical feasibility of a billion-ton annual supply report April 2005

Cited By (3)

Range expansion in an introduced social parasite-host species pair journal May 2019
Development and use of a switchgrass (Panicum virgatum L.) transformation pipeline by the BioEnergy Science Center to evaluate plants for reduced cell wall recalcitrance journal December 2017
Progress in understanding and overcoming biomass recalcitrance: a BioEnergy Science Center (BESC) perspective journal November 2017