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Title: High-Quality Draft Genome Sequence of Desulfovibrio carbinoliphilus FW-101-2B, an Organic Acid-Oxidizing Sulfate-Reducing Bacterium Isolated from Uranium(VI)-Contaminated Groundwater

Journal Article · · Genome Announcements
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  1. Montana State Univ., Bozeman, MT (United States)
  2. Univ. of Tennessee, Knoxville, TN (United States)
  3. Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA
  4. Dept. of Energy Joint Genome Inst., Walnut Creek, CA (United States)
  5. Lawrence Berkeley National Lab., Berkeley, California (United States)
  6. Stanford Univ., CA (United States)
  7. Univ. of Tennessee, Knoxville, TN (United States); Lawrence Berkeley National Lab., Berkeley, California (United States)
  8. Montana State Univ., Bozeman, MT (United States); Lawrence Berkeley National Lab., Berkeley, California (United States)
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Desulfovibrio carbinoliphilus subsp. oakridgensis FW-101-2B is an anaerobic, organic acid/alcohol-oxidizing, sulfate-reducing δ-proteobacterium. FW-101-2B was isolated from contaminated groundwater at The Field Research Center at Oak Ridge National Lab after in situ stimulation for heavy metal-reducing conditions. The genome will help elucidate the metabolic potential of sulfate-reducing bacteria during uranium reduction.

Research Organization:
Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States); Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States)
Sponsoring Organization:
USDOE Office of Science (SC), Biological and Environmental Research (BER)
Grant/Contract Number:
AC05-00OR22725; AC02-05CH11231; AC52- 07NA27344; AC02-06NA25396
OSTI ID:
1214940
Alternate ID(s):
OSTI ID: 1265391; OSTI ID: 1619068
Journal Information:
Genome Announcements, Vol. 3, Issue 2; ISSN 2169-8287
Publisher:
American Society for MicrobiologyCopyright Statement
Country of Publication:
United States
Language:
English

References (7)

In Situ Bioreduction of Uranium (VI) to Submicromolar Levels and Reoxidation by Dissolved Oxygen journal August 2007
Bacterial community succession during in situ uranium bioremediation: spatial similarities along controlled flow paths journal September 2008
Temporal Transcriptomic Analysis as Desulfovibrio vulgaris Hildenborough Transitions into Stationary Phase during Electron Donor Depletion journal August 2006
Velvet: Algorithms for de novo short read assembly using de Bruijn graphs journal February 2008
Prodigal: prokaryotic gene recognition and translation initiation site identification journal March 2010
IMG ER: a system for microbial genome annotation expert review and curation journal June 2009
Shifting the genomic gold standard for the prokaryotic species definition journal October 2009

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