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  1. Response of the Verwey transition in magnetite to controlled point-like disorder induced by 2.5 MeV electron irradiation

    Controlled point-like disorder induced by low temperature 2.5 MeV electron irradiation was used to probe the nature of the Verwey transition in magnetite, Fe3O4. Two large single crystals, one with optimal transition temperature, TV ≈ 121 K, and another with TV ≈ 109 K, as well as magnetite magnetosome nanocrystals harvested from the lysed cells of the marine magnetotactic vibrio Magnetovibrio blakemorei strain MV-1, TV ≈ 110 K, were examined. Temperature-dependent resistivity is consistent with the semiconductor-to-semiconductor (insulator) sharp, step-like Verwey transition from a state with a small bandgap of around 60 meV to a state with a large bandgapmore » of about 300 meV. The irradiation causes an up-shift of the resistivity curves above the transition without transition smearing or broadening. It also causes an apparent down-shift of the resistivity maximum at high temperatures. In the lower crystal, the electron irradiation drives the transition temperature into a “forbidden” interval of TV , believed to separate the first order from the second order phase transition. Contrary to this belief, the transition itself remains sharp and hysteretic without a significant change in the hysteresis width indicating the strong 1st order character of the Verwey transition for all TV values. The separate 2nd order - looking transition is likely due to sample inhomogeneities. Here we conclude that the sudden change of the bandgap accompanied (or driven) by the monoclinic distortion and the change of magnetic anisotropy is the reason for the Verwey transition in magnetite and the effect of additional disorder is mostly in the smearing of the sharp gap edges near the Fermi level.« less
  2. Biogeochemical fingerprinting of magnetotactic bacterial magnetite

    Biominerals are important archives of the presence of life and environmental processes in the geological record. However, ascribing a clear biogenic nature to minerals with nanometer-sized dimensions has proven challenging. Identifying hallmark features of biologically controlled mineralization is particularly important for the case of magnetite crystals, resembling those produced by magnetotactic bacteria (MTB), which have been used as evidence of early prokaryotic life on Earth and in meteorites. In this work, we show that magnetite produced by MTB displays a clear coupled C–N signal that is absent in abiogenic and/or biomimetic (protein-mediated) nanometer-sized magnetite. We attribute the presence of thismore » signal to intracrystalline organic components associated with proteins involved in magnetosome formation by MTB. These results demonstrate that we can assign a biogenic origin to nanometer-sized magnetite crystals, and potentially other biominerals of similar dimensions, using unique geochemical signatures directly measured at the nanoscale. This finding is significant for searching for the earliest presence of life in the Earth’s geological record and prokaryotic life on other planets.« less
  3. Interlayer spacing in pillared and grafted MCM-22 type silicas: density functional theory analysis versus experiment

    Pillaring of synthetic layered crystalline silicates and aluminosilicates provides a strategy to enhance their adsorption and separation performance, and can facilitate the understanding of such behavior in more complex natural clays. In this study, we perform the first-principles density functional theory calculations for the pillaring of the pure silica polymorph of an MCM-22 type molecular sieve. Starting with a precursor material MCM-22P with fully hydroxylated layers, a pillaring agent, (EtO)3SiR, can react with hydroxyl groups (–OH) on adjacent internal surfaces, 2(–OH) + (EtO)3SiR + H2O → (–O)2SiOHR + 3EtOH, to form a pillar bridging these surfaces, or with a singlemore » hydroxyl, –OH + (EtO)3SiR + 2H2O → (–O)Si(OH)2R + 3EtOH, grafting to one surface. For computational efficiency, we replace the experimental organic ligand, R, by a methyl group. We find that the interlayer spacing in MCM-22 is reduced by 2.66 Å relative to weakly bound layers in the precursor MCM-22P. Including (–O)2SiR bridges for 50% (100%) of the hydroxyl sites in MCM-22P increases the interlayer spacing relative to MCM-22 by 2.52 Å (2.46 Å). For comparison, we also analyze the system where all –OH groups in MCM-22P are replaced by non-bridging grafted (–O)Si(OH)2R which results in a smaller interlayer spacing expansion of 2.17 Å relative to MCM-22. Our results for the interlayer spacing in the pillared materials are compatible with experimental observations for a similar MCM-22 type material with low Al content (Si : Al = 51 : 1) of an expansion relative to MCM-22 of roughly 2.8 Å and 2.5 Å from our x-ray diffraction and scanning transmission electron microscopy analyses, respectively. The latter analysis reveals significant variation in individual layer spacings.« less
  4. Salt-Induced Liquid–Liquid Phase Separation and Interfacial Crystal Formation in Poly(N-isopropylacrylamide)-Capped Gold Nanoparticles

    In this study, we report on the dynamic response of aqueous solution containing poly(N-isopropylacrylamide)-capped gold (pNIPAM-capped Au) nanoparticles to the introduction of NaCl. The addition of NaCl increases the density of the solution and prompts the liquid–liquid phase separation process, confining the polymer to a lower-density salt-deficient aqueous phase. As the pNIPAM-occupied aqueous phase becomes excluded from the higher-density NaCl-rich bulk solution, the pNIPAM-capped Au nanoparticles follow liquid–liquid phase separation and reside on the surface of the formed pNIPAM-filled globes at the interface between the NaCl-rich bulk solution and the pNIPAM-containing solution, exhibiting a hexagonal packing with interparticle distance ofmore » ~23 nm. Driven by the minimization of hydrophobic interactions, the buoyant Au-decorated globular assemblies filled with aqueous pNIPAM solution escape to the air/water interface, collapse at the interface, and form planar hexagonal crystalline domains of different sizes, depending on NaCl concentration. At low NaCl concentrations, the collapse of the Au-decorated aqueous pNIPAM-filled globes at the air/water interface produces an interfacial two-dimensional (2D) hexagonal lattice of pNIPAM-capped Au nanoparticles with an interparticle distance of 25–27 nm. The increase in NaCl concentration leads to a formation of smaller globes escaping to, and collapsing at the air/water interface and yielding smaller two-dimensional hexagonal domains.« less
  5. Imaging of Unstained DNA Origami Triangles with Electron Microscopy

    Abstract Imaging of scaffolded DNA and DNA origami nanostructures has been dominated by atomic force microscopy of samples immobilized on bulk substrates. Less commonly used are electron microscopy techniques, typically carried out after negative staining of DNA structures or by using cryo‐transmission electron microscopy (TEM). Here, direct imaging of unstained DNA origami on common electron‐transparent substrates with utilizing high angular annular dark field scanning transmission electron microscopy (HAADF‐STEM) is reported. This approach establishes a method for depositing and imaging intact DNA triangles with mass‐thickness contrast sufficient to measure the scaffold‐to‐scaffold distances and the length of the triangle's seam. The signal‐to‐noisemore » ratio (SNR) of the DNA supported on amorphous carbon as a function of the carbon thickness is measured on three types of commercially available TEM grids. This allows for edge detection of ≈1 nm height DNA triangles on carbon substrates as thick as ≈25 nm. Observations on the effect on SNR with the imaging modes are discussed. The effect of cation concentration used for pretreating the grid on the image resolution is also explored. This work presents proof‐of‐concept results demonstrating that electron microscopy can be used to resolve key elements of the DNA origami triangle without the use of staining protocols.« less
  6. Off-axis electron holography of bacterial cells and magnetic nanoparticles in liquid

    Here, the mapping of electrostatic potentials and magnetic fields in liquids using electron holography has been considered to be unrealistic. Here, we show that hydrated cells of Magnetospirillum magneticum strain AMB-1 and assemblies of magnetic nanoparticles can be studied using off-axis electron holography in a fluid cell specimen holder within the transmission electron microscope. Considering that the holographic object and reference wave both pass through liquid, the recorded electron holograms show sufficient interference fringe contrast to permit reconstruction of the phase shift of the electron wave and mapping of the magnetic induction from bacterial magnetite nanocrystals. We assess the challengesmore » of performing in situ magnetization reversal experiments using a fluid cell specimen holder, discuss approaches for improving spatial resolution and specimen stability, and outline future perspectives for studying scientific phenomena, ranging from interparticle interactions in liquids and electrical double layers at solid–liquid interfaces to biomineralization and the mapping of electrostatic potentials associated with protein aggregation and folding.« less
  7. Visualization of Iron-Binding Micelles in Acidic Recombinant Biomineralization Protein, MamC

    Biological macromolecules are utilized in low-temperature synthetic methods to exert precise control over nanoparticle nucleation and placement. They enable low-temperature formation of a variety of functional nanostructured materials with properties often not achieved via conventional synthetic techniques. Here we report on the in situ visualization of a novel acidic bacterial recombinant protein, MamC, commonly present in the magnetosome membrane of several magnetotactic bacteria, including Magnetococcus marinus , strain MC-1. Our findings provide an insight into the self-assembly of MamC and point to formation of the extended protein surface, which is assumed to play an important role in the formation ofmore » biotemplated inorganic nanoparticles. The self-organization of MamC is compared to the behavior of another acidic recombinant iron-binding protein, Mms6.« less

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