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Title: Automated Microarray Image Analysis Toolbox for MATLAB

The Automated Microarray Image Analysis (AMIA) Toolbox for MATLAB is a flexible, open-source microarray image analysis tool that allows the user to customize analysis of sets of microarray images. This tool provides several methods of identifying and quantify spot statistics, as well as extensive diagnostic statistics and images to identify poor data quality or processing. The open nature of this software allows researchers to understand the algorithms used to provide intensity estimates and to modify them easily if desired.
Authors:
; ; ; ;
Publication Date:
OSTI Identifier:
15020808
Report Number(s):
PNWD-SA-6685
TRN: US200521%%275
DOE Contract Number:
AC05-76RL01830
Resource Type:
Journal Article
Resource Relation:
Journal Name: Bioinformatics; Journal Volume: 21; Journal Issue: 17
Research Org:
Pacific Northwest National Laboratory (PNNL), Richland, WA (US)
Sponsoring Org:
USDOE
Country of Publication:
United States
Language:
English
Subject:
99 GENERAL AND MISCELLANEOUS//MATHEMATICS, COMPUTING, AND INFORMATION SCIENCE; ALGORITHMS; IMAGE PROCESSING; STATISTICS; AUTOMATION; COMPUTER CODES image analysis; microarray images; spot statistics; diagnostic statistics