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Title: FASTQ quality control dashboard

FQCDB builds up existing open source software, FastQC, implementing a modern web interface for across parsed output of FastQC. In addition, FQCDB is extensible as a web service to include additional plots of type line, boxplot, or heatmap, across data formatted according to guidelines. The interface is also configurable via more readable JSON format, enabling customization by non-web programmers.
Publication Date:
OSTI Identifier:
1310550
Report Number(s):
FQCDB; 004862MLTPL00
Battelle IPID 30940-E
DOE Contract Number:
AC05-76RL01830
Software Revision:
00
Software Package Number:
004862
Software CPU:
MLTPL
Open Source:
Yes
Available under MIT license; https://github.com/brwnj/fqc
Source Code Available:
Yes
Other Software Info:
Open source license (MIT)
Related Software:
FastQC http://www.bioinformatics.babraham.ac.uk/projects/fastqc/, https://github.com/mbostock/d3
Research Org:
Pacific Northwest National Laboratory (PNNL), Richland, WA (United States)
Sponsoring Org:
USDOE
Contributing Orgs:
Battelle Memorial Institute, Pacific Northwest Division
Country of Publication:
United States

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