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Title: RNA regulatory networks diversified through curvature of the PUF protein scaffold

Journal Article · · Nature Communications
DOI:https://doi.org/10.1038/ncomms9213· OSTI ID:1245868

Research Organization:
Argonne National Laboratory (ANL), Argonne, IL (United States). Advanced Photon Source (APS)
Sponsoring Organization:
UNIVERSITYNIH
OSTI ID:
1245868
Journal Information:
Nature Communications, Vol. 6, Issue 8213; ISSN 2041-1723
Publisher:
Nature Publishing Group
Country of Publication:
United States
Language:
ENGLISH

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Cited By (26)

Protein-RNA networks revealed through covalent RNA marks journal November 2015
Multiple Puf proteins regulate the stability of ribosome biogenesis transcripts journal September 2018
Toward Identifying Subnetworks from FBF Binding Landscapes in Caenorhabditis Spermatogenic or Oogenic Germlines journal November 2018
Fragment-based modelling of single stranded RNA bound to RNA recognition motif containing proteins journal April 2016
Regulation of LRG1 expression by RNA‐binding protein Puf5 in the budding yeast cell wall integrity pathway journal October 2018
Towards identifying subnetworks from FBF binding landscapes in Caenorhabditis spermatogenic or oogenic germlines journal September 2018
Nop9 binds the central pseudoknot region of 18S rRNA journal January 2017
Structural basis for the specific recognition of 18S rRNA by APUM23 journal October 2017
Cytoplasmic deadenylase Ccr4 is required for translational repression of LRG1 mRNA in the stationary phase journal February 2017
Context-dependent deposition and regulation of mRNAs in P-bodies text January 2018
Expanding RNA binding specificity and affinity of engineered PUF domains journal February 2018
PUF family proteins FBF-1 and FBF-2 regulate germline stem and progenitor cell proliferation and differentiation in C. elegans journal October 2019
A crystal structure of a collaborative RNA regulatory complex reveals mechanisms to refine target specificity journal August 2019
Context-dependent deposition and regulation of mRNAs in P-bodies journal January 2018
Distinct RNA-binding modules in a single PUF protein cooperate to determine RNA specificity journal July 2019
The mechanism of Ccr4-Not recruitment to specific mRNAs involves sequence-selective tethering by RNA-binding proteins posted_content November 2018
Context-dependent deposition and regulation of mRNAs in P-bodies text January 2018
Engineering a conserved RNA regulatory protein repurposes its biological function in vivo journal January 2019
Genome-Wide Mapping of Decay Factor–mRNA Interactions in Yeast Identifies Nutrient-Responsive Transcripts as Targets of the Deadenylase Ccr4 journal January 2018
RNA-binding proteins distinguish between similar sequence motifs to promote targeted deadenylation by Ccr4-Not journal January 2019
The PUF binding landscape in metazoan germ cells journal May 2016
Drosophila Nanos acts as a molecular clamp that modulates the RNA-binding and repression activities of Pumilio journal August 2016
Functional and molecular characterization of the conserved Arabidopsis PUMILIO protein, APUM9 journal March 2019
Recurrent rewiring and emergence of RNA regulatory networks journal March 2017
High-Throughput Micro-Characterization of RNA–Protein Interactions book January 2019
Post‐transcriptional gene regulation in the biology and virulence ofCandida albicans journal April 2016

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