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Title: Draft genome sequence of Streptomyces vitaminophilus ATCC 31673, a producer of pyrrolomycin antibiotics, some of which contain a nitro group

Journal Article · · Genome Announcements
 [1];  [1];  [2];  [1]
  1. Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States)
  2. Rice Univ., Houston, TX (United States)
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Streptomyces vitaminophilus produces pyrrolomycins, which are halogenated polyketide antibiotics. Some of the pyrrolomycins contain a rare nitro group located on the pyrrole ring. In addition, the 6.5-Mbp genome encodes 5,941 predicted protein-coding sequences in 39 contigs with a 71.9% G+C content.

Research Organization:
Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States)
Sponsoring Organization:
USDOE
Grant/Contract Number:
AC05-00OR22725
OSTI ID:
1235843
Journal Information:
Genome Announcements, Vol. 4, Issue 1; ISSN 2169-8287
Publisher:
American Society for MicrobiologyCopyright Statement
Country of Publication:
United States
Language:
English

References (17)

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New chlorinated nitro-pyrrole antibiotics, Pyrrolomycin A and B SE-2080 A and B. journal January 1981
SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing journal May 2012
Pyrrolomycins C,D and E,new members of pyrrolomycins. journal January 1983
Actinosporangiwn vitaminophilum sp. nov. journal July 1983
Structure and synthesis of pyrrolomycin A. a chlorinated nitro-pyrrole antibiotic. journal January 1981
Pyrrolomycin group antibiotics inhibit substance P-induced release of myeloperoxidase from human polymorphonuclear leukocytes. journal January 1991
antiSMASH 3.0—a comprehensive resource for the genome mining of biosynthetic gene clusters journal May 2015
Anthelmintic activity of dioxapyrrolomycin. journal January 1992
Investigating the Biosynthetic Origin of the Nitro Group in Pyrrolomycins journal December 2008
Pilon: An Integrated Tool for Comprehensive Microbial Variant Detection and Genome Assembly Improvement journal November 2014
Fast gapped-read alignment with Bowtie 2 journal March 2012
Mind the Gap: Upgrading Genomes with Pacific Biosciences RS Long-Read Sequencing Technology journal November 2012
Cloning and Characterization of the Pyrrolomycin Biosynthetic Gene Clusters from Actinosporangium vitaminophilum ATCC 31673 and Streptomyces sp. Strain UC 11065 journal December 2006
Naturally-occurring nitro compounds journal January 2011
Transfer of Actinosporangium violaceum Krasil’nikov and Yuan, Actinosporangium vitaminophilum Shomura et al. and Actinopycnidium caeruleum Krasil’nikov to the Genus Streptomyces, with Amended Descriptions of the Species journal July 1986
Charting the genomic landscape of seed-free plants text January 2021

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Related Subjects

59 BASIC BIOLOGICAL SCIENCES
genome
bacteria
Streptomyces
natural products