Complete genome sequence of the plant-associated Serratia plymuthica strain AS13

Journal Article · Sun Jan 01 00:00:00 EST 2012 · Standards in Genomic Sciences

DOI:https://doi.org/10.4056/sigs.2966299· OSTI ID:1059350

Neupane, Saraswoti ^[1]; Finlay, Roger D ^[1]; Kyrpides, Nikos C ^[2]; Goodwin, Lynne A ^[3]; Alstrom, Sadhna ^[1]; Lucas, Susan ^[2]; Land, Miriam L ^[4]; Han, James ^[2]; Lapidus, Alla L ^[2]; Cheng, Jan-Fang ^[2]; Bruce, David ^[3]; Pitluck, Sam ^[2]; Peters, Lin ^[2]; Ovchinnikova, Galina ^[2]; Held, Brittany ^[3]; Han, Cliff ^[3]; Detter, J C ^[2]; Tapia, Roxanne ^[3]; Hauser, Loren John ^[4]; Ivanova, N ^[2] ; Pagani, Ioanna ^[2]; Woyke, Tanja ^[2]; Klenk, Hans-Peter ^[5]; Hogberg, Nils ^[1]

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1. Uppsala University, Uppsala, Sweden
2. U.S. Department of Energy, Joint Genome Institute
3. Los Alamos National Laboratory (LANL)
4. ORNL
5. DSMZ - German Collection of Microorganisms and Cell Cultures GmbH, Braunschweig, Germany

Serratia plymuthica AS13 is a plant-associated Gammaproteobacteria, isolated from rapeseed roots. It is of special interest because of its ability to inhibit fungal pathogens of rapeseed and to promote plant growth. The complete genome of S. plymuthica AS13 consists of a 5,442,549 bp circular chromosome. The chromosome contains 4,951 protein-coding genes, 87 tRNA genes and 7 rRNA operons. This genome was sequenced as part of the project enti- tled Genomics of four rapeseed plant growth promoting bacteria with antagonistic effect on plant pathogens within the 2010 DOE-JGI Community Sequencing Program (CSP2010).

• Research Organization: Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States)
• Sponsoring Organization: Work for Others (WFO)
• DOE Contract Number: DE-AC05-00OR22725
• OSTI ID: 1059350
• Journal Information: Standards in Genomic Sciences, Vol. 7, Issue 1; ISSN 1944--3277
• Country of Publication: United States
• Language: English

Related Subjects

Gram-negative
non-sporulating
motile
plant-associated
chemoorganotrophic
Enterobacteriaceae