The Utility of Macroecological Rules for Microbial Biogeography
Abstract
Macroecological rules have been developed for plants and animals that describe large-scale distributional patterns and attempt to explain the underlying physiological and ecological processes behind them. Similarly, microorganisms exhibit patterns in relative abundance, distribution, diversity, and traits across space and time, yet it remains unclear the extent to which microorganisms follow macroecological rules initially developed for macroorganisms. Additionally, the usefulness of these rules as a null hypothesis when surveying microorganisms has yet to be fully evaluated. With rapid advancements in sequencing technology, we have seen a recent increase in microbial studies that utilize macroecological frameworks. Here, we review and synthesize these macroecological microbial studies with two main objectives: (1) to determine to what extent macroecological rules explain the distribution of host-associated and free-living microorganisms, and (2) to understand which environmental factors and stochastic processes may explain these patterns among microbial clades (archaea, bacteria, fungi, and protists) and habitats (host-associated and free living; terrestrial and aquatic). Overall, 78% of microbial macroecology studies focused on free living, aquatic organisms. In addition, most studies examined macroecological rules at the community level with only 35% of studies surveying organismal patterns across space. At the community level microorganisms often tracked patterns of macroorganisms for islandmore »
- Authors:
-
- Univ. of Tennessee, Knoxville, TN (United States)
- Univ. of Tennessee, Knoxville, TN (United States); Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States)
- Publication Date:
- Research Org.:
- Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States)
- Sponsoring Org.:
- USDOE; National Science Foundation (NSF)
- OSTI Identifier:
- 1782031
- Grant/Contract Number:
- AC05-00OR22725
- Resource Type:
- Accepted Manuscript
- Journal Name:
- Frontiers in Ecology and Evolution
- Additional Journal Information:
- Journal Volume: 9; Journal Issue: 1; Journal ID: ISSN 2296-701X
- Publisher:
- Frontiers Research Foundation
- Country of Publication:
- United States
- Language:
- English
- Subject:
- 59 BASIC BIOLOGICAL SCIENCES; microorganisms; Rapoport’s rule; Abundance/Occupancy; Bergmann’s rule; Theory of Island Biogeography; Species-Area Relationship; Latitudinal Diversity Gradient; macroecology
Citation Formats
Dickey, Jonathan R., Swenie, Rachel A., Turner, Sophia C., Winfrey, Claire C., Yaffar De La Fuente, Daniela, Padukone, Anchal, Beals, Kendall K., Sheldon, Kimberly S., and Kivlin, Stephanie N. The Utility of Macroecological Rules for Microbial Biogeography. United States: N. p., 2021.
Web. doi:10.3389/fevo.2021.633155.
Dickey, Jonathan R., Swenie, Rachel A., Turner, Sophia C., Winfrey, Claire C., Yaffar De La Fuente, Daniela, Padukone, Anchal, Beals, Kendall K., Sheldon, Kimberly S., & Kivlin, Stephanie N. The Utility of Macroecological Rules for Microbial Biogeography. United States. https://doi.org/10.3389/fevo.2021.633155
Dickey, Jonathan R., Swenie, Rachel A., Turner, Sophia C., Winfrey, Claire C., Yaffar De La Fuente, Daniela, Padukone, Anchal, Beals, Kendall K., Sheldon, Kimberly S., and Kivlin, Stephanie N. Thu .
"The Utility of Macroecological Rules for Microbial Biogeography". United States. https://doi.org/10.3389/fevo.2021.633155. https://www.osti.gov/servlets/purl/1782031.
@article{osti_1782031,
title = {The Utility of Macroecological Rules for Microbial Biogeography},
author = {Dickey, Jonathan R. and Swenie, Rachel A. and Turner, Sophia C. and Winfrey, Claire C. and Yaffar De La Fuente, Daniela and Padukone, Anchal and Beals, Kendall K. and Sheldon, Kimberly S. and Kivlin, Stephanie N.},
abstractNote = {Macroecological rules have been developed for plants and animals that describe large-scale distributional patterns and attempt to explain the underlying physiological and ecological processes behind them. Similarly, microorganisms exhibit patterns in relative abundance, distribution, diversity, and traits across space and time, yet it remains unclear the extent to which microorganisms follow macroecological rules initially developed for macroorganisms. Additionally, the usefulness of these rules as a null hypothesis when surveying microorganisms has yet to be fully evaluated. With rapid advancements in sequencing technology, we have seen a recent increase in microbial studies that utilize macroecological frameworks. Here, we review and synthesize these macroecological microbial studies with two main objectives: (1) to determine to what extent macroecological rules explain the distribution of host-associated and free-living microorganisms, and (2) to understand which environmental factors and stochastic processes may explain these patterns among microbial clades (archaea, bacteria, fungi, and protists) and habitats (host-associated and free living; terrestrial and aquatic). Overall, 78% of microbial macroecology studies focused on free living, aquatic organisms. In addition, most studies examined macroecological rules at the community level with only 35% of studies surveying organismal patterns across space. At the community level microorganisms often tracked patterns of macroorganisms for island biogeography (74% confirm) but rarely followed Latitudinal Diversity Gradients (LDGs) of macroorganisms (only 32% confirm). However, when microorganisms and macroorganisms shared the same macroecological patterns, underlying environmental drivers (e.g., temperature) were the same. Because we found a lack of studies for many microbial groups and habitats, we conclude our review by outlining several outstanding questions and creating recommendations for future studies in microbial ecology.},
doi = {10.3389/fevo.2021.633155},
journal = {Frontiers in Ecology and Evolution},
number = 1,
volume = 9,
place = {United States},
year = {Thu Apr 01 00:00:00 EDT 2021},
month = {Thu Apr 01 00:00:00 EDT 2021}
}
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