DOE PAGES title logo U.S. Department of Energy
Office of Scientific and Technical Information

Title: Functional and transcriptional characterization of complex neuronal co-cultures

Abstract

Brain-on-a-chip systems are designed to simulate brain activity using traditional in vitro cell culture on an engineered platform. It is a noninvasive tool to screen new drugs, evaluate toxicants, and elucidate disease mechanisms. However, successful recapitulation of brain function on these systems is dependent on the complexity of the cell culture. In this study, we increased cellular complexity of traditional (simple) neuronal cultures by co-culturing with astrocytes and oligodendrocyte precursor cells (complex culture). We evaluated and compared neuronal activity (e.g., network formation and maturation), cellular composition in long-term culture, and the transcriptome of the two cultures. Compared to simple cultures, neurons from complex co-cultures exhibited earlier synapse and network development and maturation, which was supported by localized synaptophysin expression, up-regulation of genes involved in mature neuronal processes, and synchronized neural network activity. Also, mature oligodendrocytes and reactive astrocytes were only detected in complex cultures upon transcriptomic analysis of age-matched cultures. Functionally, the GABA antagonist bicuculline had a greater influence on bursting activity in complex versus simple cultures. Collectively, the cellular complexity of brain-on-a-chip systems intrinsically develops cell type-specific phenotypes relevant to the brain while accelerating the maturation of neuronal networks, important features underdeveloped in traditional cultures.

Authors:
ORCiD logo [1]; ORCiD logo [1];  [1];  [1];  [1]; ORCiD logo [1];  [1];  [1];  [1]; ORCiD logo [1];  [1];  [1];  [1]; ORCiD logo [1]
  1. Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States)
Publication Date:
Research Org.:
Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States)
Sponsoring Org.:
USDOE National Nuclear Security Administration (NNSA); USDOE Laboratory Directed Research and Development (LDRD) Program
OSTI Identifier:
1651194
Report Number(s):
LLNL-JRNL-767110
Journal ID: ISSN 2045-2322; 957584
Grant/Contract Number:  
AC52-07NA27344; 17-SI-002; 20-ERD-009
Resource Type:
Accepted Manuscript
Journal Name:
Scientific Reports
Additional Journal Information:
Journal Volume: 10; Journal Issue: 1; Journal ID: ISSN 2045-2322
Publisher:
Nature Publishing Group
Country of Publication:
United States
Language:
English
Subject:
59 BASIC BIOLOGICAL SCIENCES; Cellular neuroscience; neuronal physiology

Citation Formats

Enright, Heather A., Lam, Doris, Sebastian, Aimy, Sales, Ana Paula, Cadena, Jose, Hum, Nicholas R., Osburn, Joanne J., Peters, Sandra G., Petkus, Bryan, Soscia, David A., Kulp, Kristen S., Loots, Gabriela G., Wheeler, Elizabeth K., and Fischer, Nicholas O. Functional and transcriptional characterization of complex neuronal co-cultures. United States: N. p., 2020. Web. doi:10.1038/s41598-020-67691-2.
Enright, Heather A., Lam, Doris, Sebastian, Aimy, Sales, Ana Paula, Cadena, Jose, Hum, Nicholas R., Osburn, Joanne J., Peters, Sandra G., Petkus, Bryan, Soscia, David A., Kulp, Kristen S., Loots, Gabriela G., Wheeler, Elizabeth K., & Fischer, Nicholas O. Functional and transcriptional characterization of complex neuronal co-cultures. United States. https://doi.org/10.1038/s41598-020-67691-2
Enright, Heather A., Lam, Doris, Sebastian, Aimy, Sales, Ana Paula, Cadena, Jose, Hum, Nicholas R., Osburn, Joanne J., Peters, Sandra G., Petkus, Bryan, Soscia, David A., Kulp, Kristen S., Loots, Gabriela G., Wheeler, Elizabeth K., and Fischer, Nicholas O. Fri . "Functional and transcriptional characterization of complex neuronal co-cultures". United States. https://doi.org/10.1038/s41598-020-67691-2. https://www.osti.gov/servlets/purl/1651194.
@article{osti_1651194,
title = {Functional and transcriptional characterization of complex neuronal co-cultures},
author = {Enright, Heather A. and Lam, Doris and Sebastian, Aimy and Sales, Ana Paula and Cadena, Jose and Hum, Nicholas R. and Osburn, Joanne J. and Peters, Sandra G. and Petkus, Bryan and Soscia, David A. and Kulp, Kristen S. and Loots, Gabriela G. and Wheeler, Elizabeth K. and Fischer, Nicholas O.},
abstractNote = {Brain-on-a-chip systems are designed to simulate brain activity using traditional in vitro cell culture on an engineered platform. It is a noninvasive tool to screen new drugs, evaluate toxicants, and elucidate disease mechanisms. However, successful recapitulation of brain function on these systems is dependent on the complexity of the cell culture. In this study, we increased cellular complexity of traditional (simple) neuronal cultures by co-culturing with astrocytes and oligodendrocyte precursor cells (complex culture). We evaluated and compared neuronal activity (e.g., network formation and maturation), cellular composition in long-term culture, and the transcriptome of the two cultures. Compared to simple cultures, neurons from complex co-cultures exhibited earlier synapse and network development and maturation, which was supported by localized synaptophysin expression, up-regulation of genes involved in mature neuronal processes, and synchronized neural network activity. Also, mature oligodendrocytes and reactive astrocytes were only detected in complex cultures upon transcriptomic analysis of age-matched cultures. Functionally, the GABA antagonist bicuculline had a greater influence on bursting activity in complex versus simple cultures. Collectively, the cellular complexity of brain-on-a-chip systems intrinsically develops cell type-specific phenotypes relevant to the brain while accelerating the maturation of neuronal networks, important features underdeveloped in traditional cultures.},
doi = {10.1038/s41598-020-67691-2},
journal = {Scientific Reports},
number = 1,
volume = 10,
place = {United States},
year = {Fri Jul 03 00:00:00 EDT 2020},
month = {Fri Jul 03 00:00:00 EDT 2020}
}

Journal Article:
Free Publicly Available Full Text
Publisher's Version of Record

Citation Metrics:
Cited by: 12 works
Citation information provided by
Web of Science

Save / Share:

Works referenced in this record:

Persistent ERK activation maintains learning-induced long-lasting modulation of synaptic connectivity
journal, October 2008

  • Cohen-Matsliah, S. I.; Seroussi, Y.; Rosenblum, K.
  • Learning & Memory, Vol. 15, Issue 10
  • DOI: 10.1101/lm.1127008

Effects of antiepileptic drugs on hippocampal neurons coupled to micro-electrode arrays
journal, January 2013

  • Colombi, Ilaria; Mahajani, Sameehan; Frega, Monica
  • Frontiers in Neuroengineering, Vol. 6
  • DOI: 10.3389/fneng.2013.00010

Neurons derived from different brain regions are inherently different in vitro: a novel multiregional brain-on-a-chip
journal, March 2017

  • Dauth, Stephanie; Maoz, Ben M.; Sheehy, Sean P.
  • Journal of Neurophysiology, Vol. 117, Issue 3
  • DOI: 10.1152/jn.00575.2016

Oligodendrocytes as Regulators of Neuronal Networks during Early Postnatal Development
journal, May 2011


A linked organ-on-chip model of the human neurovascular unit reveals the metabolic coupling of endothelial and neuronal cells
journal, October 2018

  • Maoz, Ben M.; Herland, Anna; FitzGerald, Edward A.
  • Nature Biotechnology, Vol. 36, Issue 9
  • DOI: 10.1038/nbt.4226

A multielectrode array microchannel platform reveals both transient and slow changes in axonal conduction velocity
journal, August 2017


GABAergic interneuron to astrocyte signalling: a neglected form of cell communication in the brain
journal, October 2014

  • Losi, Gabriele; Mariotti, Letizia; Carmignoto, Giorgio
  • Philosophical Transactions of the Royal Society B: Biological Sciences, Vol. 369, Issue 1654
  • DOI: 10.1098/rstb.2013.0609

CNS Synaptogenesis Promoted by Glia-Derived Cholesterol
journal, November 2001


Microelectrode arrays: A physiologically based neurotoxicity testing platform for the 21st century☆
journal, August 2010


Neurotoxic reactive astrocytes are induced by activated microglia
journal, January 2017

  • Liddelow, Shane A.; Guttenplan, Kevin A.; Clarke, Laura E.
  • Nature, Vol. 541, Issue 7638
  • DOI: 10.1038/nature21029

Organs-on-a-chip: A new paradigm for toxicological assessment and preclinical drug development
journal, January 2017

  • Bovard, David; Iskandar, Anita; Luettich, Karsta
  • Toxicology Research and Application, Vol. 1
  • DOI: 10.1177/2397847317726351

Network-wide integration of stem cell-derived neurons and mouse cortical neurons using microfabricated co-culture devices
journal, January 2012


Astrocyte Control of Synaptic Transmission and Neurovascular Coupling
journal, July 2006


Gliotransmitters Travel in Time and Space
journal, February 2014


Neurovascular unit on a chip: implications for translational applications
journal, January 2013

  • Alcendor, Donald J.; Block III, Frank E.; Cliffel, David E.
  • Stem Cell Research & Therapy, Vol. 4, Issue Suppl 1
  • DOI: 10.1186/scrt379

Neuron-oligodendrocyte myelination co-culture derived from embryonic rat spinal cord and cerebral cortex: In Vitro Myelination Model
journal, January 2012

  • Pang, Yi; Zheng, Baoying; Kimberly, Simpson L.
  • Brain and Behavior, Vol. 2, Issue 1
  • DOI: 10.1002/brb3.33

Microdevice Platform for In Vitro Nervous System and Its Disease Model
journal, September 2017


Human iPSC-derived neuronal models for in vitro neurotoxicity assessment
journal, July 2018


The activity of selective sigma-1 receptor ligands in seizure models in vivo
journal, June 2017


A new indirect co-culture set up of mouse hippocampal neurons and cortical astrocytes on microelectrode arrays
journal, March 2012


Quantitative differences in developmental profiles of spontaneous activity in cortical and hippocampal cultures
journal, January 2015


Axon-to-Glia Interaction Regulates GABA A Receptor Expression in Oligodendrocytes
journal, November 2015

  • Arellano, Rogelio O.; Sánchez-Gómez, María Victoria; Alberdi, Elena
  • Molecular Pharmacology, Vol. 89, Issue 1
  • DOI: 10.1124/mol.115.100594

Physiology of Astroglia
journal, January 2018


Network dynamics of 3D engineered neuronal cultures: a new experimental model for in-vitro electrophysiology
journal, June 2014

  • Frega, Monica; Tedesco, Mariateresa; Massobrio, Paolo
  • Scientific Reports, Vol. 4, Issue 1
  • DOI: 10.1038/srep05489

Stage-specific Expression of Myelin Basic Protein in Oligodendrocytes Involves Nkx2.2-mediated Repression That Is Relieved by the Sp1 Transcription Factor
journal, February 2005

  • Wei, Qiou; Miskimins, W. Keith; Miskimins, Robin
  • Journal of Biological Chemistry, Vol. 280, Issue 16
  • DOI: 10.1074/jbc.M500491200

Rebuilding a realistic corticostriatal “social network” from dissociated cells
journal, April 2015

  • Garcia-Munoz, Marianela; Taillefer, Eddy; Pnini, Reuven
  • Frontiers in Systems Neuroscience, Vol. 9
  • DOI: 10.3389/fnsys.2015.00063

Comprehensive Integration of Single-Cell Data
journal, June 2019


Functional cortical neurons and astrocytes from human pluripotent stem cells in 3D culture
journal, May 2015

  • Paşca, Anca M.; Sloan, Steven A.; Clarke, Laura E.
  • Nature Methods, Vol. 12, Issue 7
  • DOI: 10.1038/nmeth.3415

A new approach to neural cell culture for long-term studies
journal, September 2001


Extracellular regulators of axonal growth in the adult central nervous system
journal, July 2006

  • Liu, Betty P.; Cafferty, William B. J.; Budel, Stephane O.
  • Philosophical Transactions of the Royal Society B: Biological Sciences, Vol. 361, Issue 1473
  • DOI: 10.1098/rstb.2006.1891

Development and function of human cerebral cortex neural networks from pluripotent stem cells in vitro
journal, September 2015

  • Kirwan, P.; Turner-Bridger, B.; Peter, M.
  • Development, Vol. 142, Issue 18
  • DOI: 10.1242/dev.123851

Monitoring neural stem cell differentiation using PEDOT–PSS based MEA
journal, September 2013

  • Furukawa, Yuriko; Shimada, Akiyoshi; Kato, Koichi
  • Biochimica et Biophysica Acta (BBA) - General Subjects, Vol. 1830, Issue 9
  • DOI: 10.1016/j.bbagen.2013.01.022

Induction of long-term potentiation and depression phenomena in human induced pluripotent stem cell-derived cortical neurons
journal, January 2016

  • Odawara, A.; Katoh, H.; Matsuda, N.
  • Biochemical and Biophysical Research Communications, Vol. 469, Issue 4
  • DOI: 10.1016/j.bbrc.2015.12.087

Astrocytes Control Synapse Formation, Function, and Elimination
journal, February 2015

  • Chung, Won-Suk; Allen, Nicola J.; Eroglu, Cagla
  • Cold Spring Harbor Perspectives in Biology, Vol. 7, Issue 9
  • DOI: 10.1101/cshperspect.a020370

Emerging roles of astrocytes in neural circuit development
journal, April 2013

  • Clarke, Laura E.; Barres, Ben A.
  • Nature Reviews Neuroscience, Vol. 14, Issue 5
  • DOI: 10.1038/nrn3484

A Transcriptome Database for Astrocytes, Neurons, and Oligodendrocytes: A New Resource for Understanding Brain Development and Function
journal, January 2008


Changes in brain adenosine during bicuculline-induced seizures in rats. Effects of hypoxia and altered systemic blood pressure.
journal, October 1980


An RNA-Sequencing Transcriptome and Splicing Database of Glia, Neurons, and Vascular Cells of the Cerebral Cortex
journal, September 2014


Cell Biology of Astrocyte-Synapse Interactions
journal, November 2017


Organs-on-chips at the frontiers of drug discovery
journal, March 2015

  • Esch, Eric W.; Bahinski, Anthony; Huh, Dongeun
  • Nature Reviews Drug Discovery, Vol. 14, Issue 4
  • DOI: 10.1038/nrd4539

GABA release by hippocampal astrocytes
journal, January 2012

  • Le Meur, Karim; Mendizabal-Zubiaga, Juan; Grandes, Pedro
  • Frontiers in Computational Neuroscience, Vol. 6
  • DOI: 10.3389/fncom.2012.00059

Monitoring spike train synchrony
journal, March 2013

  • Kreuz, Thomas; Chicharro, Daniel; Houghton, Conor
  • Journal of Neurophysiology, Vol. 109, Issue 5
  • DOI: 10.1152/jn.00873.2012

ToppGene Suite for gene list enrichment analysis and candidate gene prioritization
journal, May 2009

  • Chen, J.; Bardes, E. E.; Aronow, B. J.
  • Nucleic Acids Research, Vol. 37, Issue Web Server
  • DOI: 10.1093/nar/gkp427

Controlled placement of multiple CNS cell populations to create complex neuronal cultures
journal, November 2017


Evaluation of in vitro neuronal platforms as surrogates for in vivo whole brain systems
journal, July 2018


Cloning and characterization of the rat myelin basic protein gene promoter
journal, August 2003


3D in vitro modeling of the central nervous system
journal, February 2015


3D neural tissue models: From spheroids to bioprinting
journal, February 2018


ERK1/2: A Key Cellular Component for the Formation, Retrieval, Reconsolidation and Persistence of Memory
journal, October 2018


A Unique Microglia Type Associated with Restricting Development of Alzheimer’s Disease
journal, June 2017


PySpike—A Python library for analyzing spike train synchrony
journal, January 2016


Brain cells and neuronal networks: Encounters with controlled microenvironments
journal, January 2015


Changing numbers of neuronal and non-neuronal cells underlie postnatal brain growth in the rat
journal, August 2009

  • Bandeira, F.; Lent, R.; Herculano-Houzel, S.
  • Proceedings of the National Academy of Sciences, Vol. 106, Issue 33
  • DOI: 10.1073/pnas.0804650106

Astrocyte-synthesized oleic acid behaves as a neurotrophic factor for neurons
journal, May 2002