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Title: Longer TOMM40 poly-T variants associated with higher FDDNP-PET medial temporal tau and amyloid binding

Abstract

The translocase of outer mitochondrial membrane 40 (TOMM40), which lies in linkage disequilibrium with the apolipoprotein E (APOE) gene, has been implicated in Alzheimer’s disease (AD). TOMM40 influences AD pathology through mitochondrial neurotoxicity, and the medial temporal lobe (MTL) is the most likely brain region for identifying early manifestations of AD-related morphology changes. While early reports indicated that the longer length poly-T allele of TOMM40 increases risk for AD, these findings have not been consistently replicated in further studies. We examined the effect of TOMM40 and APOE on regional brain positron emission tomography (PET) 2-(1-{6-[(2 [F18]fluoroethyl) (methyl) amino]-2-naphthyl}ethylidene)malononitrile (FDDNP) binding values in MTL.A total of 73 non-demented older adults (42 females; mean age: 62.9(10.9) completed genotyping for both APOE and TOMM40 and received FDDNP-PET scans. For TOMM40, the lengths of the poly-T sequence were classified as short (14–20 repeats; S), long (21–29 repeats, L) or very long (>29 repeats, VL). Using general linear models, we examined medial temporal lobe FDDNP binding and cognitive functioning between TOMM40 and APOE-4 groups, with age, sex, and education as covariates. Data from 30 individuals with APOE-4 and L TOMM40 poly-T length, 11 non E4 TOMM40 S/S, 14 non E4 TOMM40 S/VL and 13 nonmore » E4 TOMM40 VL/VL were analyzed. Medial temporal FDDNP binding differed significantly between TOMM40/APOE groups (F(3,62) = 3.3,p = .03). Participants with TOMM40 S/S exhibited significantly lower binding compared to TOMM40 S/VL and APOE-4 carriers. We did not find a significant relationship between TOMM40 poly-T lengths/APOE risk groups and cognitive functioning. This is the first report to demonstrate a significant association between longer TOMM40 poly-T lengths and higher medial temporal plaque and tangle burden in non-demented older adults. Identifying biomarkers that are risk factors for AD will enhance our ability to identify subjects likely to benefit from novel AD treatments.« less

Authors:
ORCiD logo [1];  [2];  [1];  [1];  [3];  [4];  [1]
  1. Univ. of California, Los Angeles, CA (United States). David Geffen School of Medicine
  2. Univ. of California, Los Angeles, CA (United States); Univ. of Oregon, Eugene, OR (United States)
  3. San Diego State Univ./Univ. of California, San Diego Joint Doctoral Program in Clinical Psychology, CA (United States)
  4. Univ. of California, Los Angeles, CA (United States)
Publication Date:
Research Org.:
Univ. of California, San Diego, CA (United States)
Sponsoring Org.:
USDOE Office of Science (SC); Zegar Family Foundation Research Fund; Ahmanson Foundation; McComb Foundation; McMahan Foundation; Bob and Marion Wilson; Fran and Ray Stark Foundation Fund for Alzheimer’s Disease Research; Plott Professorship; Parlow-Solomon Professorship; National Institutes of Health (NIH)
OSTI Identifier:
1614562
Grant/Contract Number:  
FC03-87ER60615; P01-AG025831; AG13308; P50 AG 16570; MH/AG58156; MH52453; AG10123; M01-RR00865
Resource Type:
Accepted Manuscript
Journal Name:
PLoS ONE
Additional Journal Information:
Journal Volume: 13; Journal Issue: 12; Journal ID: ISSN 1932-6203
Publisher:
Public Library of Science
Country of Publication:
United States
Language:
English
Subject:
59 BASIC BIOLOGICAL SCIENCES; Science & technology - other topics; Alzheimer's disease; Apolipoprotein genes; Neuroimaging; Positron emission tomography; Cognitive impairment; Elderly; Genetic predisposition; Linkage disequilibrium

Citation Formats

Siddarth, Prabha, Burggren, Alison C., Merrill, David A., Ercoli, Linda M., Mahmood, Zanjbeel, Barrio, Jorge R., and Small, Gary W. Longer TOMM40 poly-T variants associated with higher FDDNP-PET medial temporal tau and amyloid binding. United States: N. p., 2018. Web. doi:10.1371/journal.pone.0208358.
Siddarth, Prabha, Burggren, Alison C., Merrill, David A., Ercoli, Linda M., Mahmood, Zanjbeel, Barrio, Jorge R., & Small, Gary W. Longer TOMM40 poly-T variants associated with higher FDDNP-PET medial temporal tau and amyloid binding. United States. https://doi.org/10.1371/journal.pone.0208358
Siddarth, Prabha, Burggren, Alison C., Merrill, David A., Ercoli, Linda M., Mahmood, Zanjbeel, Barrio, Jorge R., and Small, Gary W. Wed . "Longer TOMM40 poly-T variants associated with higher FDDNP-PET medial temporal tau and amyloid binding". United States. https://doi.org/10.1371/journal.pone.0208358. https://www.osti.gov/servlets/purl/1614562.
@article{osti_1614562,
title = {Longer TOMM40 poly-T variants associated with higher FDDNP-PET medial temporal tau and amyloid binding},
author = {Siddarth, Prabha and Burggren, Alison C. and Merrill, David A. and Ercoli, Linda M. and Mahmood, Zanjbeel and Barrio, Jorge R. and Small, Gary W.},
abstractNote = {The translocase of outer mitochondrial membrane 40 (TOMM40), which lies in linkage disequilibrium with the apolipoprotein E (APOE) gene, has been implicated in Alzheimer’s disease (AD). TOMM40 influences AD pathology through mitochondrial neurotoxicity, and the medial temporal lobe (MTL) is the most likely brain region for identifying early manifestations of AD-related morphology changes. While early reports indicated that the longer length poly-T allele of TOMM40 increases risk for AD, these findings have not been consistently replicated in further studies. We examined the effect of TOMM40 and APOE on regional brain positron emission tomography (PET) 2-(1-{6-[(2 [F18]fluoroethyl) (methyl) amino]-2-naphthyl}ethylidene)malononitrile (FDDNP) binding values in MTL.A total of 73 non-demented older adults (42 females; mean age: 62.9(10.9) completed genotyping for both APOE and TOMM40 and received FDDNP-PET scans. For TOMM40, the lengths of the poly-T sequence were classified as short (14–20 repeats; S), long (21–29 repeats, L) or very long (>29 repeats, VL). Using general linear models, we examined medial temporal lobe FDDNP binding and cognitive functioning between TOMM40 and APOE-4 groups, with age, sex, and education as covariates. Data from 30 individuals with APOE-4 and L TOMM40 poly-T length, 11 non E4 TOMM40 S/S, 14 non E4 TOMM40 S/VL and 13 non E4 TOMM40 VL/VL were analyzed. Medial temporal FDDNP binding differed significantly between TOMM40/APOE groups (F(3,62) = 3.3,p = .03). Participants with TOMM40 S/S exhibited significantly lower binding compared to TOMM40 S/VL and APOE-4 carriers. We did not find a significant relationship between TOMM40 poly-T lengths/APOE risk groups and cognitive functioning. This is the first report to demonstrate a significant association between longer TOMM40 poly-T lengths and higher medial temporal plaque and tangle burden in non-demented older adults. Identifying biomarkers that are risk factors for AD will enhance our ability to identify subjects likely to benefit from novel AD treatments.},
doi = {10.1371/journal.pone.0208358},
journal = {PLoS ONE},
number = 12,
volume = 13,
place = {United States},
year = {Wed Dec 05 00:00:00 EST 2018},
month = {Wed Dec 05 00:00:00 EST 2018}
}

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Works referenced in this record:

Amyloid imaging of alzheimer’s disease using pittsburgh compound B
journal, November 2006


The genetic risk of Alzheimer’s disease beyond APOE ε4: systematic review of Alzheimer’s genetic risk scores
journal, August 2018


Genetic variants specific to aging-related verbal memory: Insights from GWASs in a population-based cohort
journal, August 2017


Imaging tau and amyloid-β proteinopathies in Alzheimer disease and other conditions
journal, February 2018

  • Villemagne, Victor L.; Doré, Vincent; Burnham, Samantha C.
  • Nature Reviews Neurology, Vol. 14, Issue 4
  • DOI: 10.1038/nrneurol.2018.9

Genetic assessment of age-associated Alzheimer disease risk: Development and validation of a polygenic hazard score
journal, March 2017


Genome-Wide Association Studies in Alzheimer Disease
journal, March 2008


An Inherited Variable Poly-T Repeat Genotype in TOMM40 in Alzheimer Disease
journal, May 2010


Prediction of Cognitive Decline by Positron Emission Tomography of Brain Amyloid and Tau
journal, February 2012


Comprehensive Search for Alzheimer Disease Susceptibility Loci in the APOE Region
journal, October 2012


Cerebral amyloid PET imaging in Alzheimer’s disease
journal, October 2013

  • Jack, Clifford R.; Barrio, Jorge R.; Kepe, Vladimir
  • Acta Neuropathologica, Vol. 126, Issue 5
  • DOI: 10.1007/s00401-013-1185-7

Amyloid imaging of alzheimer’s disease using pittsburgh compound B
journal, November 2006


Genome-wide Association Studies in Alzheimer’s Disease: A Review
journal, August 2013

  • Tosto, Giuseppe; Reitz, Christiane
  • Current Neurology and Neuroscience Reports, Vol. 13, Issue 10
  • DOI: 10.1007/s11910-013-0381-0

New Genetic Approaches to AD: Lessons from APOE-TOMM40 Phylogenetics
journal, April 2016

  • Lutz, Michael W.; Crenshaw, Donna; Welsh-Bohmer, Kathleen A.
  • Current Neurology and Neuroscience Reports, Vol. 16, Issue 5
  • DOI: 10.1007/s11910-016-0643-8

An Overview of Genome-Wide Association Studies in Alzheimer’s Disease
journal, January 2016


Apolipoprotein E genotyping by one-stage PCR
journal, May 1991


Reliability of drawing regions of interest for positron emission tomographic data
journal, November 1992

  • Small, Gary W.; Stern, Chantal E.; Mandelkern, Mark A.
  • Psychiatry Research: Neuroimaging, Vol. 45, Issue 3
  • DOI: 10.1016/0925-4927(92)90025-y

The effect of TOMM40 poly-T length on gray matter volume and cognition in middle-aged persons with APOE ɛ3/ɛ3 genotype
journal, July 2011

  • Johnson, Sterling C.; La Rue, Asenath; Hermann, Bruce P.
  • Alzheimer's & Dementia, Vol. 7, Issue 4
  • DOI: 10.1016/j.jalz.2010.11.012

Longitudinal modeling of cognitive aging and the TOMM40 effect
journal, November 2012

  • Caselli, Richard J.; Dueck, Amylou C.; Huentelman, Matthew J.
  • Alzheimer's & Dementia, Vol. 8, Issue 6
  • DOI: 10.1016/j.jalz.2011.11.006

Hippocampal thinning linked to longer TOMM40 poly‐T variant lengths in the absence of the APOE ε4 variant
journal, February 2017

  • Burggren, Alison C.; Mahmood, Zanjbeel; Harrison, Theresa M.
  • Alzheimer's & Dementia, Vol. 13, Issue 7
  • DOI: 10.1016/j.jalz.2016.12.009

Risk factors associated with the onset and progression of Alzheimer’s disease: A systematic review of the evidence
journal, July 2017


TOMM40 poly-T repeat lengths, age of onset and psychosis risk in Alzheimer disease
journal, December 2011


Functional analysis of APOE locus genetic variation implicates regional enhancers in the regulation of both TOMM40 and APOE
journal, November 2011

  • Bekris, Lynn M.; Lutz, Franziska; Yu, Chang-En
  • Journal of Human Genetics, Vol. 57, Issue 1
  • DOI: 10.1038/jhg.2011.123

Imaging tau and amyloid-β proteinopathies in Alzheimer disease and other conditions
journal, February 2018

  • Villemagne, Victor L.; Doré, Vincent; Burnham, Samantha C.
  • Nature Reviews Neurology, Vol. 14, Issue 4
  • DOI: 10.1038/nrneurol.2018.9

The genetic risk of Alzheimer’s disease beyond APOE ε4: systematic review of Alzheimer’s genetic risk scores
journal, August 2018


A TOMM40 variable-length polymorphism predicts the age of late-onset Alzheimer's disease
journal, December 2009

  • Roses, A. D.; Lutz, M. W.; Amrine-Madsen, H.
  • The Pharmacogenomics Journal, Vol. 10, Issue 5
  • DOI: 10.1038/tpj.2009.69

Serotonin 1A receptors in the living brain of Alzheimer's disease patients
journal, January 2006

  • Kepe, V.; Barrio, J. R.; Huang, S. -C.
  • Proceedings of the National Academy of Sciences, Vol. 103, Issue 3
  • DOI: 10.1073/pnas.0510237103

Distribution Volume Ratios without Blood Sampling from Graphical Analysis of PET Data
journal, September 1996


Localization of Neurofibrillary Tangles and Beta-Amyloid Plaques in the Brains of Living Patients With Alzheimer Disease
journal, January 2002


The Genetics of Alzheimer Disease
journal, July 2012


Cliff´s Delta Calculator: A non-parametric effect size program for two groups of observations
journal, June 2010


Genetic risk factors in Alzheimer's disease
journal, December 1998

  • Tilley, L.; Morgan, K.; Kalsheker, N.
  • Molecular Pathology, Vol. 51, Issue 6
  • DOI: 10.1136/mp.51.6.293

Regional Brain Atrophy Rate Predicts Future Cognitive Decline: 6-year Longitudinal MR Imaging Study of Normal Aging
journal, December 2003


Cardiovascular risk factors and future risk of Alzheimer’s disease
journal, November 2014


Vascular risk factors and Alzheimer’s disease
journal, November 2014


Genetic variants specific to aging-related verbal memory: Insights from GWASs in a population-based cohort
journal, August 2017


Primum non nocere
journal, March 2023


Epidemiology and Etiology of Alzheimer’s disease: From Genetic to Non- Genetic Factors
journal, September 2013


Postmortem 3-D Brain Hemisphere Cortical Tau and Amyloid-β Pathology Mapping and Quantification as a Validation Method of Neuropathology Imaging
journal, June 2013

  • Smid, Lojze M.; Kepe, Vladimir; Vinters, Harry V.
  • Journal of Alzheimer's Disease, Vol. 36, Issue 2
  • DOI: 10.3233/jad-122434

Non-familial Alzheimer's disease is mainly due to genetic factors
journal, July 2002

  • Ashford, J. Wesson; Mortimer, James A.
  • Journal of Alzheimer's Disease, Vol. 4, Issue 3
  • DOI: 10.3233/jad-2002-4307

The Importance of Being Connected
journal, April 2011

  • Lutz, Michael W.; Crenshaw, Donna G.; Saunders, Ann M.
  • Journal of Alzheimer's Disease, Vol. 24, Issue 2
  • DOI: 10.3233/jad-2010-101765

TOMM40 rs10524523 Polymorphism's Role in Late-Onset Alzheimer's Disease and in Longevity
journal, January 2012

  • Maruszak, Aleksandra; Pepłońska, Beata; Safranow, Krzysztof
  • Journal of Alzheimer's Disease, Vol. 28, Issue 2
  • DOI: 10.3233/jad-2011-110743