DOE PAGES title logo U.S. Department of Energy
Office of Scientific and Technical Information

Title: The molecular gradient using the divide-expand-consolidate resolution of the identity second-order Møller-Plesset perturbation theory: The DEC-RI-MP2 gradient

Abstract

Here, we report an implementation of the molecular gradient using the divide-expand-consolidate resolution of the identity second-order Møller-Plesset perturbation theory (DEC-RI-MP2). The new DEC-RI-MP2 gradient method combines the precision control as well as the linear-scaling and massively parallel features of the DEC scheme with efficient evaluations of the gradient contributions using the RI approximation. We further demonstrate that the DEC-RI-MP2 gradient method is capable of calculating molecular gradients for very large molecular systems. A test set of supramolecular complexes containing up to 158 atoms and 1960 contracted basis functions has been employed to demonstrate the general applicability of the DEC-RI-MP2 method and to analyze the errors of the DEC approximation. The test set also contains molecules of complicated electronic structures and is thus deliberately chosen to stress test the DEC-RI-MP2 gradient implementation. Furthermore, as a showcase example the full molecular gradient for insulin (787 atoms and 7604 contracted basis functions) has been evaluated.

Authors:
 [1];  [1];  [1]
  1. Aarhus Univ. (Denmark)
Publication Date:
Research Org.:
Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States). Oak Ridge Leadership Computing Facility (OLCF)
Sponsoring Org.:
USDOE Office of Science (SC); European Research Council (ERC)
OSTI Identifier:
1565480
Alternate Identifier(s):
OSTI ID: 1263691
Grant/Contract Number:  
AC05-00OR22725
Resource Type:
Accepted Manuscript
Journal Name:
Journal of Chemical Physics
Additional Journal Information:
Journal Volume: 145; Journal Issue: 2; Journal ID: ISSN 0021-9606
Publisher:
American Institute of Physics (AIP)
Country of Publication:
United States
Language:
English
Subject:
37 INORGANIC, ORGANIC, PHYSICAL AND ANALYTICAL CHEMISTRY

Citation Formats

Bykov, Dmytro, Kristensen, Kasper, and Kjærgaard, Thomas. The molecular gradient using the divide-expand-consolidate resolution of the identity second-order Møller-Plesset perturbation theory: The DEC-RI-MP2 gradient. United States: N. p., 2016. Web. doi:10.1063/1.4956454.
Bykov, Dmytro, Kristensen, Kasper, & Kjærgaard, Thomas. The molecular gradient using the divide-expand-consolidate resolution of the identity second-order Møller-Plesset perturbation theory: The DEC-RI-MP2 gradient. United States. https://doi.org/10.1063/1.4956454
Bykov, Dmytro, Kristensen, Kasper, and Kjærgaard, Thomas. Thu . "The molecular gradient using the divide-expand-consolidate resolution of the identity second-order Møller-Plesset perturbation theory: The DEC-RI-MP2 gradient". United States. https://doi.org/10.1063/1.4956454. https://www.osti.gov/servlets/purl/1565480.
@article{osti_1565480,
title = {The molecular gradient using the divide-expand-consolidate resolution of the identity second-order Møller-Plesset perturbation theory: The DEC-RI-MP2 gradient},
author = {Bykov, Dmytro and Kristensen, Kasper and Kjærgaard, Thomas},
abstractNote = {Here, we report an implementation of the molecular gradient using the divide-expand-consolidate resolution of the identity second-order Møller-Plesset perturbation theory (DEC-RI-MP2). The new DEC-RI-MP2 gradient method combines the precision control as well as the linear-scaling and massively parallel features of the DEC scheme with efficient evaluations of the gradient contributions using the RI approximation. We further demonstrate that the DEC-RI-MP2 gradient method is capable of calculating molecular gradients for very large molecular systems. A test set of supramolecular complexes containing up to 158 atoms and 1960 contracted basis functions has been employed to demonstrate the general applicability of the DEC-RI-MP2 method and to analyze the errors of the DEC approximation. The test set also contains molecules of complicated electronic structures and is thus deliberately chosen to stress test the DEC-RI-MP2 gradient implementation. Furthermore, as a showcase example the full molecular gradient for insulin (787 atoms and 7604 contracted basis functions) has been evaluated.},
doi = {10.1063/1.4956454},
journal = {Journal of Chemical Physics},
number = 2,
volume = 145,
place = {United States},
year = {Thu Jul 14 00:00:00 EDT 2016},
month = {Thu Jul 14 00:00:00 EDT 2016}
}

Journal Article:
Free Publicly Available Full Text
Publisher's Version of Record

Citation Metrics:
Cited by: 17 works
Citation information provided by
Web of Science

Save / Share:

Works referenced in this record:

A near linear-scaling smooth local coupled cluster algorithm for electronic structure
journal, August 2006

  • Subotnik, Joseph E.; Sodt, Alex; Head-Gordon, Martin
  • The Journal of Chemical Physics, Vol. 125, Issue 7
  • DOI: 10.1063/1.2336426

Efficient and accurate local approximations to coupled-electron pair approaches: An attempt to revive the pair natural orbital method
journal, March 2009

  • Neese, Frank; Wennmohs, Frank; Hansen, Andreas
  • The Journal of Chemical Physics, Vol. 130, Issue 11
  • DOI: 10.1063/1.3086717

Analytic gradients for coupled‐cluster energies that include noniterative connected triple excitations: Application to c i s ‐ and t r a n s ‐HONO
journal, May 1991

  • Lee, Timothy J.; Rendell, Alistair P.
  • The Journal of Chemical Physics, Vol. 94, Issue 9
  • DOI: 10.1063/1.460411

A direct MP2 gradient method
journal, February 1990


Low-order scaling local electron correlation methods. I. Linear scaling local MP2
journal, October 1999

  • Schütz, Martin; Hetzer, Georg; Werner, Hans-Joachim
  • The Journal of Chemical Physics, Vol. 111, Issue 13
  • DOI: 10.1063/1.479957

An improved semidirect MP2 gradient method
journal, February 1999


The ORCA program system: The ORCA program system
journal, June 2011

  • Neese, Frank
  • Wiley Interdisciplinary Reviews: Computational Molecular Science, Vol. 2, Issue 1
  • DOI: 10.1002/wcms.81

The elimination of singularities in derivative calculations
journal, October 1985


On some approximations in applications of X α theory
journal, October 1979

  • Dunlap, B. I.; Connolly, J. W. D.; Sabin, J. R.
  • The Journal of Chemical Physics, Vol. 71, Issue 8
  • DOI: 10.1063/1.438728

An efficient local coupled cluster method for accurate thermochemistry of large systems
journal, October 2011

  • Werner, Hans-Joachim; Schütz, Martin
  • The Journal of Chemical Physics, Vol. 135, Issue 14
  • DOI: 10.1063/1.3641642

Fitting the Coulomb potential variationally in linear-combination-of-atomic-orbitals density-functional calculations
journal, January 1982


Dynamically screened local correlation method using enveloping localized orbitals
journal, July 2006

  • Auer, Alexander A.; Nooijen, Marcel
  • The Journal of Chemical Physics, Vol. 125, Issue 2
  • DOI: 10.1063/1.2209685

Analytical energy gradients for local second-order Mo/ller–Plesset perturbation theory
journal, April 1998

  • El Azhary, Adel; Rauhut, Guntram; Pulay, Peter
  • The Journal of Chemical Physics, Vol. 108, Issue 13
  • DOI: 10.1063/1.475955

Semidirect MP2 gradient evaluation on workstation computers: The MPGRAD program
journal, August 1993

  • Haase, Frank; Ahlrichs, Reinhart
  • Journal of Computational Chemistry, Vol. 14, Issue 8
  • DOI: 10.1002/jcc.540140805

Analytical energy gradients for local second-order Møller–Plesset perturbation theory using density fitting approximations
journal, July 2004

  • Schütz, Martin; Werner, Hans-Joachim; Lindh, Roland
  • The Journal of Chemical Physics, Vol. 121, Issue 2
  • DOI: 10.1063/1.1760747

Auxiliary basis sets to approximate Coulomb potentials
journal, June 1995


MP2 energy and density for large molecular systems with internal error control using the Divide-Expand-Consolidate scheme
journal, January 2012

  • Kristensen, Kasper; Høyvik, Ida-Marie; Jansik, Branislav
  • Physical Chemistry Chemical Physics, Vol. 14, Issue 45
  • DOI: 10.1039/c2cp41958k

Gaussian basis sets for use in correlated molecular calculations. I. The atoms boron through neon and hydrogen
journal, January 1989

  • Dunning, Thom H.
  • The Journal of Chemical Physics, Vol. 90, Issue 2
  • DOI: 10.1063/1.456153

Orbital spaces in the divide-expand-consolidate coupled cluster method
journal, April 2016

  • Ettenhuber, Patrick; Baudin, Pablo; Kjærgaard, Thomas
  • The Journal of Chemical Physics, Vol. 144, Issue 16
  • DOI: 10.1063/1.4947019

General biorthogonal projected bases as applied to second-order Møller-Plesset perturbation theory
journal, August 2007

  • Weijo, Ville; Manninen, Pekka; Jørgensen, Poul
  • The Journal of Chemical Physics, Vol. 127, Issue 7
  • DOI: 10.1063/1.2752813

The Dalton quantum chemistry program system: The Dalton program
journal, September 2013

  • Aidas, Kestutis; Angeli, Celestino; Bak, Keld L.
  • Wiley Interdisciplinary Reviews: Computational Molecular Science, Vol. 4, Issue 3
  • DOI: 10.1002/wcms.1172

An atomic orbital-based reformulation of energy gradients in second-order Møller–Plesset perturbation theory
journal, April 2008

  • Schweizer, Sabine; Doser, Bernd; Ochsenfeld, Christian
  • The Journal of Chemical Physics, Vol. 128, Issue 15
  • DOI: 10.1063/1.2906127

Analytical differentiation of the energy contribution due to triple excitations in fourth-order Møller-Plesset perturbation theory
journal, December 1988


Molecular gradient for second-order Møller-Plesset perturbation theory using the divide-expand-consolidate (DEC) scheme
journal, September 2012

  • Kristensen, Kasper; Jørgensen, Poul; Jansík, Branislav
  • The Journal of Chemical Physics, Vol. 137, Issue 11
  • DOI: 10.1063/1.4752432

Rigorous integral screening for electron correlation methods
journal, November 2005

  • Lambrecht, Daniel S.; Doser, Bernd; Ochsenfeld, Christian
  • The Journal of Chemical Physics, Vol. 123, Issue 18
  • DOI: 10.1063/1.2079987

Analytic evaluation of energy gradients for the single and double excitation coupled cluster (CCSD) wave function: Theory and application
journal, November 1987

  • Scheiner, Andrew C.; Scuseria, Gustavo E.; Rice, Julia E.
  • The Journal of Chemical Physics, Vol. 87, Issue 9
  • DOI: 10.1063/1.453655

Auxiliary basis sets for main row atoms and transition metals and their use to approximate Coulomb potentials
journal, October 1997

  • Eichkorn, Karin; Weigend, Florian; Treutler, Oliver
  • Theoretical Chemistry Accounts: Theory, Computation, and Modeling (Theoretica Chimica Acta), Vol. 97, Issue 1-4
  • DOI: 10.1007/s002140050244

On the efficient evaluation of analytic energy gradients
journal, December 1985


Linear scaling coupled cluster and perturbation theories in the atomic orbital basis
journal, November 1999

  • Scuseria, Gustavo E.; Ayala, Philippe Y.
  • The Journal of Chemical Physics, Vol. 111, Issue 18
  • DOI: 10.1063/1.480174

Tighter multipole-based integral estimates and parallel implementation of linear-scaling AO–MP2 theory
journal, January 2008

  • Doser, Bernd; Lambrecht, Daniel S.; Ochsenfeld, Christian
  • Physical Chemistry Chemical Physics, Vol. 10, Issue 23
  • DOI: 10.1039/b804110e

Tensor factorizations of local second-order Møller–Plesset theory
journal, January 2011

  • Yang, Jun; Kurashige, Yuki; Manby, Frederick R.
  • The Journal of Chemical Physics, Vol. 134, Issue 4
  • DOI: 10.1063/1.3528935

Analytical evaluation of energy gradients in quadratic configuration interaction theory
journal, September 1988


Extension of linear-scaling divide-and-conquer-based correlation method to coupled cluster theory with singles and doubles excitations
journal, July 2008

  • Kobayashi, Masato; Nakai, Hiromi
  • The Journal of Chemical Physics, Vol. 129, Issue 4
  • DOI: 10.1063/1.2956490

Linear scaling local correlation approach for solving the coupled cluster equations of large systems
journal, December 2001

  • Li, Shuhua; Ma, Jing; Jiang, Yuansheng
  • Journal of Computational Chemistry, Vol. 23, Issue 2
  • DOI: 10.1002/jcc.10003

Linear scaling coupled cluster method with correlation energy based error control
journal, July 2010

  • Ziółkowski, Marcin; Jansík, Branislav; Kjærgaard, Thomas
  • The Journal of Chemical Physics, Vol. 133, Issue 1
  • DOI: 10.1063/1.3456535

Mo/ller–Plesset energy derivatives
journal, August 1988

  • Jo/rgensen, Poul; Helgaker, Trygve
  • The Journal of Chemical Physics, Vol. 89, Issue 3
  • DOI: 10.1063/1.455152

A derivation of the frozen-orbital unrestricted open-shell and restricted closed-shell second-order perturbation theory analytic gradient expressions
journal, November 2003

  • Aikens, Christine M.; Webb, Simon P.; Bell, Rob L.
  • Theoretical Chemistry Accounts: Theory, Computation, and Modeling (Theoretica Chimica Acta), Vol. 110, Issue 4
  • DOI: 10.1007/s00214-003-0453-3

Efficient linear-scaling second-order Møller-Plesset perturbation theory: The divide–expand–consolidate RI-MP2 model
journal, February 2016

  • Baudin, Pablo; Ettenhuber, Patrick; Reine, Simen
  • The Journal of Chemical Physics, Vol. 144, Issue 5
  • DOI: 10.1063/1.4940732

Semi-direct algorithms for the MP2 energy and gradient
journal, February 1990


Linear scaling second-order Moller–Plesset theory in the atomic orbital basis for large molecular systems
journal, February 1999

  • Ayala, Philippe Y.; Scuseria, Gustavo E.
  • The Journal of Chemical Physics, Vol. 110, Issue 8
  • DOI: 10.1063/1.478256

Fully automated implementation of the incremental scheme: Application to CCSD energies for hydrocarbons and transition metal compounds
journal, April 2007

  • Friedrich, Joachim; Hanrath, Michael; Dolg, Michael
  • The Journal of Chemical Physics, Vol. 126, Issue 15
  • DOI: 10.1063/1.2721538

M�ller-Plesset (MP2) perturbation theory for large molecules
journal, November 1993


Supramolecular Binding Thermodynamics by Dispersion-Corrected Density Functional Theory
journal, July 2012


Nuclear second analytical derivative calculations using auxiliary basis set expansions
journal, January 2004


A new direct MP2 gradient algorithm with implementation on a massively parallel computer
journal, June 1996


A natural linear scaling coupled-cluster method
journal, January 2004

  • Flocke, N.; Bartlett, Rodney J.
  • The Journal of Chemical Physics, Vol. 121, Issue 22
  • DOI: 10.1063/1.1811606

Efficient and accurate approximations to the local coupled cluster singles doubles method using a truncated pair natural orbital basis
journal, January 2009

  • Neese, Frank; Hansen, Andreas; Liakos, Dimitrios G.
  • The Journal of Chemical Physics, Vol. 131, Issue 6
  • DOI: 10.1063/1.3173827

The analytic evaluation of second-order møller-plesset (MP2) dipole moment derivatives
journal, May 1987


Analytic energy gradient for second-order Møller-Plesset perturbation theory based on the fragment molecular orbital method
journal, July 2011

  • Nagata, Takeshi; Fedorov, Dmitri G.; Ishimura, Kazuya
  • The Journal of Chemical Physics, Vol. 135, Issue 4
  • DOI: 10.1063/1.3611020

Localizability of dynamic electron correlation
journal, September 1983


Low-order scaling local electron correlation methods. IV. Linear scaling local coupled-cluster (LCCSD)
journal, January 2001

  • Schütz, Martin; Werner, Hans-Joachim
  • The Journal of Chemical Physics, Vol. 114, Issue 2
  • DOI: 10.1063/1.1330207

Third‐order MBPT gradients
journal, May 1985

  • Fitzgerald, George; Harrison, Robert; Laidig, William D.
  • The Journal of Chemical Physics, Vol. 82, Issue 9
  • DOI: 10.1063/1.448832

Self-consistent molecular Hartree—Fock—Slater calculations I. The computational procedure
journal, September 1973


A parallel second-order Møller-Plesset gradient
journal, June 1997

  • Fletcher, By GRAHAM D.; Rendell, Alistair P.; Sherwood, Paul
  • Molecular Physics, Vol. 91, Issue 3
  • DOI: 10.1080/002689797171328

Analytic first and second derivatives for the CCSDT-n (n = 1–3) models: a first step towards the efficient calculation of CCSDT properties
journal, January 2000

  • Gauss, Jürgen; Stanton, John F.
  • Physical Chemistry Chemical Physics, Vol. 2, Issue 10
  • DOI: 10.1039/a909820h

New parallel algorithm for MP2 energy gradient calculations
journal, January 2007

  • Ishimura, Kazuya; Pulay, Peter; Nagase, Shigeru
  • Journal of Computational Chemistry, Vol. 28, Issue 12
  • DOI: 10.1002/jcc.20731

Derivative studies in hartree-fock and møller-plesset theories
journal, March 1979

  • Pople, J. A.; Krishnan, R.; Schlegel, H. B.
  • International Journal of Quantum Chemistry, Vol. 16, Issue S13
  • DOI: 10.1002/qua.560160825

Derivative studies in configuration–interaction theory
journal, April 1980

  • Krishnan, R.; Schlegel, H. B.; Pople, J. A.
  • The Journal of Chemical Physics, Vol. 72, Issue 8
  • DOI: 10.1063/1.439708

Analytic gradients from correlated wave functions via the two‐particle density matrix and the unitary group approach
journal, April 1980

  • Brooks, Bernard R.; Laidig, William D.; Saxe, Paul
  • The Journal of Chemical Physics, Vol. 72, Issue 8
  • DOI: 10.1063/1.439707

Analytic Molecular Hessian Calculations for CC2 and MP2 Combined with the Resolution of Identity Approximation
journal, February 2013

  • Friese, Daniel H.; Hättig, Christof; Koβmann, Jörg
  • Journal of Chemical Theory and Computation, Vol. 9, Issue 3
  • DOI: 10.1021/ct400034t

A Locality Analysis of the Divide–Expand–Consolidate Coupled Cluster Amplitude Equations
journal, May 2011

  • Kristensen, Kasper; Ziółkowski, Marcin; Jansík, Branislav
  • Journal of Chemical Theory and Computation, Vol. 7, Issue 6
  • DOI: 10.1021/ct200114k

A numerically stable procedure for calculating M�ller-Plesset energy derivatives, derived using the theory of Lagrangians
journal, January 1989

  • Helgaker, Trygve; J�rgensen, Poul; Handy, Nicholas C.
  • Theoretica Chimica Acta, Vol. 76, Issue 4
  • DOI: 10.1007/BF00532006

RI-MP2: first derivatives and global consistency
journal, October 1997

  • Weigend, Florian; Häser, Marco
  • Theoretical Chemistry Accounts: Theory, Computation, and Modeling (Theoretica Chimica Acta), Vol. 97, Issue 1-4
  • DOI: 10.1007/s002140050269

The structure of T 6 human insulin at 1.0 Å resolution
journal, February 2003

  • Smith, G. David; Pangborn, Walter A.; Blessing, Robert H.
  • Acta Crystallographica Section D Biological Crystallography, Vol. 59, Issue 3
  • DOI: 10.1107/S0907444902023685

Local Treatment of Electron Correlation
journal, October 1993


Local treatment of electron correlation in coupled cluster theory
journal, April 1996

  • Hampel, Claudia; Werner, Hans‐Joachim
  • The Journal of Chemical Physics, Vol. 104, Issue 16
  • DOI: 10.1063/1.471289

Analytical differentiation of the energy contribution due to triple excitations in quadratic configuration interaction theory
journal, November 1989


The divide-expand-consolidate family of coupled cluster methods: Numerical illustrations using second order Møller-Plesset perturbation theory
journal, January 2012

  • Høyvik, Ida-Marie; Kristensen, Kasper; Jansik, Branislav
  • The Journal of Chemical Physics, Vol. 136, Issue 1
  • DOI: 10.1063/1.3667266

Some Recent Results concerning the Electronic Density and the Force Constants of Small Molecules
journal, April 1960


Efficient evaluation of Coulomb integrals in a mixed Gaussian and plane-wave basis using the density fitting and Cholesky decomposition
journal, March 2012

  • Čársky, Petr; Čurík, Roman; Varga, Štefan
  • The Journal of Chemical Physics, Vol. 136, Issue 11
  • DOI: 10.1063/1.3693411

Coupled-cluster theory in a projected atomic orbital basis
journal, February 2006

  • Christiansen, Ove; Manninen, Pekka; Jørgensen, Poul
  • The Journal of Chemical Physics, Vol. 124, Issue 8
  • DOI: 10.1063/1.2173249

Integral approximations for LCAO-SCF calculations
journal, October 1993


Analytic energy gradients for the coupled-cluster singles and doubles method with the density-fitting approximation
journal, May 2016

  • Bozkaya, Uğur; Sherrill, C. David
  • The Journal of Chemical Physics, Vol. 144, Issue 17
  • DOI: 10.1063/1.4948318

Coupled-cluster theory based upon the fragment molecular-orbital method
journal, October 2005

  • Fedorov, Dmitri G.; Kitaura, Kazuo
  • The Journal of Chemical Physics, Vol. 123, Issue 13
  • DOI: 10.1063/1.2007588

Efficient Structure Optimization with Second-Order Many-Body Perturbation Theory: The RIJCOSX-MP2 Method
journal, July 2010

  • Kossmann, Simone; Neese, Frank
  • Journal of Chemical Theory and Computation, Vol. 6, Issue 8
  • DOI: 10.1021/ct100199k

Local correlation calculations using standard and renormalized coupled-cluster approaches
journal, September 2009

  • Li, Wei; Piecuch, Piotr; Gour, Jeffrey R.
  • The Journal of Chemical Physics, Vol. 131, Issue 11
  • DOI: 10.1063/1.3218842

Works referencing / citing this record:

Analytical gradient for the domain-based local pair natural orbital second order Møller-Plesset perturbation theory method (DLPNO-MP2)
journal, April 2019

  • Pinski, Peter; Neese, Frank
  • The Journal of Chemical Physics, Vol. 150, Issue 16
  • DOI: 10.1063/1.5086544

Assessment of DFT for endohedral complexes' dipole moment: PNO-LCCSD-F12 as a reference method
journal, January 2018

  • Kozłowska, Justyna; Schwilk, Max; Roztoczyńska, Agnieszka
  • Physical Chemistry Chemical Physics, Vol. 20, Issue 46
  • DOI: 10.1039/c8cp05928d

Analytical energy gradients for local second-order Møller-Plesset perturbation theory using intrinsic bond orbitals
journal, October 2018


Explicitly correlated local coupled-cluster methods using pair natural orbitals
journal, July 2018

  • Ma, Qianli; Werner, Hans-Joachim
  • Wiley Interdisciplinary Reviews: Computational Molecular Science, Vol. 8, Issue 6
  • DOI: 10.1002/wcms.1371