Direct simulation of electron transfer using ring polymer molecular dynamics: Comparison with semiclassical instanton theory and exact quantum methods
Abstract
The use of ring polymer molecular dynamics (RPMD) for the direct simulation of electron transfer (ET) reaction dynamics is analyzed in the context of Marcus theory, semiclassical instanton theory, and exact quantum dynamics approaches. For both fully atomistic and system-bath representations of condensed-phase ET, we demonstrate that RPMD accurately predicts both ET reaction rates and mechanisms throughout the normal and activationless regimes of the thermodynamic driving force. Analysis of the ensemble of reactive RPMD trajectories reveals the solvent reorganization mechanism for ET that is anticipated in the Marcus rate theory, and the accuracy of the RPMD rate calculation is understood in terms of its exact description of statistical fluctuations and its formal connection to semiclassical instanton theory for deep-tunneling processes. In the inverted regime of the thermodynamic driving force, neither RPMD nor a related formulation of semiclassical instanton theory capture the characteristic turnover in the reaction rate; comparison with exact quantum dynamics simulations reveals that these methods provide inadequate quantization of the real-time electronic-state dynamics in the inverted regime.
- Authors:
-
- California Inst. of Technology (CalTech), Pasadena, CA (United States)
- Publication Date:
- Research Org.:
- Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States). Oak Ridge Leadership Computing Facility (OLCF)
- Sponsoring Org.:
- USDOE Office of Science (SC); US Office of Naval Research (USONR); National Science Foundation (NSF)
- OSTI Identifier:
- 1564772
- Resource Type:
- Accepted Manuscript
- Journal Name:
- Journal of Chemical Physics
- Additional Journal Information:
- Journal Volume: 135; Journal Issue: 7; Journal ID: ISSN 0021-9606
- Publisher:
- American Institute of Physics (AIP)
- Country of Publication:
- United States
- Language:
- English
- Subject:
- 37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CHEMISTRY
Citation Formats
Menzeleev, Artur R., Ananth, Nandini, and Miller, Thomas F. Direct simulation of electron transfer using ring polymer molecular dynamics: Comparison with semiclassical instanton theory and exact quantum methods. United States: N. p., 2011.
Web. doi:10.1063/1.3624766.
Menzeleev, Artur R., Ananth, Nandini, & Miller, Thomas F. Direct simulation of electron transfer using ring polymer molecular dynamics: Comparison with semiclassical instanton theory and exact quantum methods. United States. https://doi.org/10.1063/1.3624766
Menzeleev, Artur R., Ananth, Nandini, and Miller, Thomas F. Wed .
"Direct simulation of electron transfer using ring polymer molecular dynamics: Comparison with semiclassical instanton theory and exact quantum methods". United States. https://doi.org/10.1063/1.3624766. https://www.osti.gov/servlets/purl/1564772.
@article{osti_1564772,
title = {Direct simulation of electron transfer using ring polymer molecular dynamics: Comparison with semiclassical instanton theory and exact quantum methods},
author = {Menzeleev, Artur R. and Ananth, Nandini and Miller, Thomas F.},
abstractNote = {The use of ring polymer molecular dynamics (RPMD) for the direct simulation of electron transfer (ET) reaction dynamics is analyzed in the context of Marcus theory, semiclassical instanton theory, and exact quantum dynamics approaches. For both fully atomistic and system-bath representations of condensed-phase ET, we demonstrate that RPMD accurately predicts both ET reaction rates and mechanisms throughout the normal and activationless regimes of the thermodynamic driving force. Analysis of the ensemble of reactive RPMD trajectories reveals the solvent reorganization mechanism for ET that is anticipated in the Marcus rate theory, and the accuracy of the RPMD rate calculation is understood in terms of its exact description of statistical fluctuations and its formal connection to semiclassical instanton theory for deep-tunneling processes. In the inverted regime of the thermodynamic driving force, neither RPMD nor a related formulation of semiclassical instanton theory capture the characteristic turnover in the reaction rate; comparison with exact quantum dynamics simulations reveals that these methods provide inadequate quantization of the real-time electronic-state dynamics in the inverted regime.},
doi = {10.1063/1.3624766},
journal = {Journal of Chemical Physics},
number = 7,
volume = 135,
place = {United States},
year = {Wed Aug 17 00:00:00 EDT 2011},
month = {Wed Aug 17 00:00:00 EDT 2011}
}
Web of Science
Works referenced in this record:
Nonadiabatic processes in condensed matter: semi-classical theory and implementation
journal, February 1991
- Webster, Frank; Rossky, P. J.; Friesner, R. A.
- Computer Physics Communications, Vol. 63, Issue 1-3
Proton-Coupled Electron Transfer
text, January 2007
- J., Meyer, Thomas; V., Huynh, My Hang
- The University of North Carolina at Chapel Hill University Libraries
On the Theory of Oxidation‐Reduction Reactions Involving Electron Transfer. I
journal, May 1956
- Marcus, R. A.
- The Journal of Chemical Physics, Vol. 24, Issue 5
A derivation of centroid molecular dynamics and other approximate time evolution methods for path integral centroid variables
journal, August 1999
- Jang, Seogjoo; Voth, Gregory A.
- The Journal of Chemical Physics, Vol. 111, Issue 6
Quantum mechanical rate constants for bimolecular reactions
journal, November 1983
- Miller, William H.; Schwartz, Steven D.; Tromp, John W.
- The Journal of Chemical Physics, Vol. 79, Issue 10
Multidimensional free-energy calculations using the weighted histogram analysis method
journal, November 1995
- Kumar, Shankar; Rosenberg, John M.; Bouzida, Djamal
- Journal of Computational Chemistry, Vol. 16, Issue 11
Quantum diffusion in liquid water from ring polymer molecular dynamics
journal, October 2005
- Miller, Thomas F.; Manolopoulos, David E.
- The Journal of Chemical Physics, Vol. 123, Issue 15
Bimolecular reaction rates from ring polymer molecular dynamics
journal, May 2009
- Collepardo-Guevara, Rosana; Suleimanov, Yury V.; Manolopoulos, David E.
- The Journal of Chemical Physics, Vol. 130, Issue 17
T RANSITION P ATH S AMPLING : Throwing Ropes Over Rough Mountain Passes, in the Dark
journal, October 2002
- Bolhuis, Peter G.; Chandler, David; Dellago, Christoph
- Annual Review of Physical Chemistry, Vol. 53, Issue 1
Quantum dynamical simulations of ultrafast photoinduced electron-transfer processes
journal, August 2004
- Egorova, Dassia; Domcke, Wolfgang
- Journal of Photochemistry and Photobiology A: Chemistry, Vol. 166, Issue 1-3
Interprotein electron transfer from cytochrome c2 to photosynthetic reaction center: Tunneling across an aqueous interface
journal, February 2005
- Miyashita, O.; Okamura, M. Y.; Onuchic, J. N.
- Proceedings of the National Academy of Sciences, Vol. 102, Issue 10
Ring-polymer instanton method for calculating tunneling splittings
journal, February 2011
- Richardson, Jeremy O.; Althorpe, Stuart C.
- The Journal of Chemical Physics, Vol. 134, Issue 5
Proton-Coupled Electron Transfer
journal, November 2007
- Huynh, My Hang V.; Meyer, Thomas J.
- Chemical Reviews, Vol. 107, Issue 11
Exact quantum statistics for electronically nonadiabatic systems using continuous path variables
journal, December 2010
- Ananth, Nandini; Miller, Thomas F.
- The Journal of Chemical Physics, Vol. 133, Issue 23
Electron transfer in proteins
journal, January 1995
- Chapman, Stephen K.; Mount, Andrew R.
- Natural Product Reports, Vol. 12, Issue 2
Semiclassical Description of Nonadiabatic Quantum Dynamics
journal, January 1997
- Stock, Gerhard; Thoss, Michael
- Physical Review Letters, Vol. 78, Issue 4
Unified approach to the quantum‐Kramers reaction rate
journal, March 1988
- Hänggi, Peter; Hontscha, Waldemar
- The Journal of Chemical Physics, Vol. 88, Issue 6
Comparison of path integral molecular dynamics methods for the infrared absorption spectrum of liquid water
journal, August 2008
- Habershon, Scott; Fanourgakis, George S.; Manolopoulos, David E.
- The Journal of Chemical Physics, Vol. 129, Issue 7
Proton transfer in a polar solvent from ring polymer reaction rate theory
journal, April 2008
- Collepardo-Guevara, Rosana; Craig, Ian R.; Manolopoulos, David E.
- The Journal of Chemical Physics, Vol. 128, Issue 14
A unified framework for quantum activated rate processes. I. General theory
journal, October 1996
- Cao, Jianshu; Voth, Gregory A.
- The Journal of Chemical Physics, Vol. 105, Issue 16
Quantum Rate Constants from Short-Time Dynamics: An Analytic Continuation Approach †
journal, March 2001
- Sim, Eunji; Krilov, Goran; Berne, B. J.
- The Journal of Physical Chemistry A, Vol. 105, Issue 12
A variational solution of the time-dependent Schrodinger equation
journal, January 1964
- McLachlan, A. D.
- Molecular Physics, Vol. 8, Issue 1
Coherent State Quantization of Constraint Systems
journal, March 1997
- Klauder, John R.
- Annals of Physics, Vol. 254, Issue 2
Statistical mechanics of isomerization dynamics in liquids and the transition state approximation
journal, January 1978
- Chandler, David
- The Journal of Chemical Physics, Vol. 68, Issue 6
The effect of intramolecular quantum modes on free energy relationships for electron transfer reactions
journal, November 1975
- Ulstrup, Jens; Jortner, Joshua
- The Journal of Chemical Physics, Vol. 63, Issue 10
Diabatic free energy curves and coordination fluctuations for the aqueous Ag+∕Ag2+ redox couple: A biased Born-Oppenheimer molecular dynamics investigation
journal, February 2006
- Blumberger, Jochen; Tavernelli, Ivano; Klein, Michael L.
- The Journal of Chemical Physics, Vol. 124, Issue 6
Quantum diffusion of hydrogen and muonium atoms in liquid water and hexagonal ice
journal, May 2008
- Markland, Thomas E.; Habershon, Scott; Manolopoulos, David E.
- The Journal of Chemical Physics, Vol. 128, Issue 19
Modeling of ultrafast electron-transfer processes: Validity of multilevel Redfield theory
journal, August 2003
- Egorova, Dassia; Thoss, Michael; Domcke, Wolfgang
- The Journal of Chemical Physics, Vol. 119, Issue 5
Statistical mechanics of quantum-classical systems
journal, October 2001
- Nielsen, Steve; Kapral, Raymond; Ciccotti, Giovanni
- The Journal of Chemical Physics, Vol. 115, Issue 13
Ring-polymer molecular dynamics rate-theory in the deep-tunneling regime: Connection with semiclassical instanton theory
journal, December 2009
- Richardson, Jeremy O.; Althorpe, Stuart C.
- The Journal of Chemical Physics, Vol. 131, Issue 21
Quantum statistics and classical mechanics: Real time correlation functions from ring polymer molecular dynamics
journal, August 2004
- Craig, Ian R.; Manolopoulos, David E.
- The Journal of Chemical Physics, Vol. 121, Issue 8
On the Theory of Electron‐Transfer Reactions. VI. Unified Treatment for Homogeneous and Electrode Reactions
journal, July 1965
- Marcus, R. A.
- The Journal of Chemical Physics, Vol. 43, Issue 2
A unified framework for quantum activated rate processes. II. The nonadiabatic limit
journal, February 1997
- Cao, Jianshu; Voth, Gregory A.
- The Journal of Chemical Physics, Vol. 106, Issue 5
Electron Transfer in Proteins
journal, June 1996
- Gray, Harry B.; Winkler, Jay R.
- Annual Review of Biochemistry, Vol. 65, Issue 1
The Activated Complex in Chemical Reactions
journal, February 1935
- Eyring, Henry
- The Journal of Chemical Physics, Vol. 3, Issue 2
Monte Carlo methods for real‐time quantum dynamics of dissipative systems
journal, April 1988
- Cline, Raymond E.; Wolynes, Peter G.
- The Journal of Chemical Physics, Vol. 88, Issue 7
Constrained reaction coordinate dynamics for the simulation of rare events
journal, April 1989
- Carter, E. A.; Ciccotti, Giovanni; Hynes, James T.
- Chemical Physics Letters, Vol. 156, Issue 5
Improved Feynman propagators on a grid and non-adiabatic corrections within the path integral framework
journal, June 1992
- Makri, Nancy
- Chemical Physics Letters, Vol. 193, Issue 5
Path integrals in the theory of condensed helium
journal, April 1995
- Ceperley, D. M.
- Reviews of Modern Physics, Vol. 67, Issue 2
System-specific discrete variable representations for path integral calculations with quasi-adiabatic propagators
journal, July 1993
- Topaler, Maria; Makri, Nancy
- Chemical Physics Letters, Vol. 210, Issue 4-6
Fate of the false vacuum. II. First quantum corrections
journal, September 1977
- Callan, Curtis G.; Coleman, Sidney
- Physical Review D, Vol. 16, Issue 6
Proton-Coupled Electron Transfer
journal, October 1998
- Cukier, Robert I.; Nocera, Daniel G.
- Annual Review of Physical Chemistry, Vol. 49, Issue 1
Bemerkung �ber die angen�herte G�ltigkeit der klassischen Mechanik innerhalb der Quantenmechanik
journal, July 1927
- Ehrenfest, P.
- Zeitschrift f�r Physik, Vol. 45, Issue 7-8
Study of an F center in molten KCl
journal, January 1984
- Parrinello, M.; Rahman, A.
- The Journal of Chemical Physics, Vol. 80, Issue 2
Chemical reaction rates from ring polymer molecular dynamics
journal, February 2005
- Craig, Ian R.; Manolopoulos, David E.
- The Journal of Chemical Physics, Vol. 122, Issue 8
Variational Theory of Chemical Reaction Rates Applied to Three‐Body Recombinations
journal, April 1960
- Keck, James C.
- The Journal of Chemical Physics, Vol. 32, Issue 4
Electron tunneling paths in proteins
journal, June 1987
- Kuki, A.; Wolynes, P.
- Science, Vol. 236, Issue 4809
Investigation of the free energy functions for electron transfer reactions
journal, December 1990
- King, Gregory; Warshel, Arieh
- The Journal of Chemical Physics, Vol. 93, Issue 12
A classical analog for electronic degrees of freedom in nonadiabatic collision processes
journal, April 1979
- Meyera), Hans‐Dieter; Miller, William H.
- The Journal of Chemical Physics, Vol. 70, Issue 7
Dynamics and dissipation in enzyme catalysis
journal, September 2011
- Boekelheide, N.; Salomon-Ferrer, R.; Miller, T. F.
- Proceedings of the National Academy of Sciences, Vol. 108, Issue 39
Path Integral Calculation of Quantum Nonadiabatic Rates in Model Condensed Phase Reactions
journal, January 1996
- Topaler, Maria; Makri, Nancy
- The Journal of Physical Chemistry, Vol. 100, Issue 11
Ring polymer molecular dynamics beyond the linear response regime: Excess electron injection and trapping in liquids
journal, January 2010
- Menzeleev, Artur R.; Miller, Thomas F.
- The Journal of Chemical Physics, Vol. 132, Issue 3
Computer "Experiments" on Classical Fluids. I. Thermodynamical Properties of Lennard-Jones Molecules
journal, July 1967
- Verlet, Loup
- Physical Review, Vol. 159, Issue 1
Powering the planet: Chemical challenges in solar energy utilization
journal, October 2006
- Lewis, N. S.; Nocera, D. G.
- Proceedings of the National Academy of Sciences, Vol. 103, Issue 43, p. 15729-15735
Electron transfers in chemistry and biology
journal, August 1985
- Marcus, R. A.; Sutin, Norman
- Biochimica et Biophysica Acta (BBA) - Reviews on Bioenergetics, Vol. 811, Issue 3
A comparative study of imaginary time path integral based methods for quantum dynamics
journal, April 2006
- Hone, Tyler D.; Rossky, Peter J.; Voth, Gregory A.
- The Journal of Chemical Physics, Vol. 124, Issue 15
Molecular model for aqueous ferrous–ferric electron transfer
journal, September 1988
- Kuharski, Robert A.; Bader, Joel S.; Chandler, David
- The Journal of Chemical Physics, Vol. 89, Issue 5
Inelastic neutron scattering from liquid para-hydrogen by ring polymer molecular dynamics
journal, March 2006
- Craig, Ian R.; Manolopoulos, David E.
- Chemical Physics, Vol. 322, Issue 1-2
Structural and energetic effects of truncating long ranged interactions in ionic and polar fluids
journal, December 1985
- Brooks, Charles L.; Pettitt, B. Montgomery; Karplus, Martin
- The Journal of Chemical Physics, Vol. 83, Issue 11
Quantum diffusion in liquid para -hydrogen from ring-polymer molecular dynamics
journal, May 2005
- Miller, Thomas F.; Manolopoulos, David E.
- The Journal of Chemical Physics, Vol. 122, Issue 18
Exploiting the isomorphism between quantum theory and classical statistical mechanics of polyatomic fluids
journal, April 1981
- Chandler, David; Wolynes, Peter G.
- The Journal of Chemical Physics, Vol. 74, Issue 7
The Theory of a General Quantum System Interacting with a Linear Dissipative System
journal, April 2000
- Feynman, R. P.; Vernon, F. L.
- Annals of Physics, Vol. 281, Issue 1-2
Generalized path integral based quantum transition state theory
journal, October 1997
- Mills, G.; Schenter, G. K.; Makarov, D. E.
- Chemical Physics Letters, Vol. 278, Issue 1-3
Improved classical path approximation for the Boltzmann density matrix
journal, February 1973
- Miller, William H.
- The Journal of Chemical Physics, Vol. 58, Issue 4
Interaction Models for Water in Relation to Protein Hydration
book, January 1981
- Berendsen, H. J. C.; Postma, J. P. M.; van Gunsteren, W. F.
- The Jerusalem Symposia on Quantum Chemistry and Biochemistry
Semiclassical limit of quantum mechanical transition state theory for nonseparable systems
journal, March 1975
- Miller, William H.
- The Journal of Chemical Physics, Vol. 62, Issue 5
Rattle: A “velocity” version of the shake algorithm for molecular dynamics calculations
journal, October 1983
- Andersen, Hans C.
- Journal of Computational Physics, Vol. 52, Issue 1
Computer simulation of muonium in water
journal, June 1984
- De Raedt, Bart; Sprik, Michiel; Klein, Michael L.
- The Journal of Chemical Physics, Vol. 80, Issue 11
Quasi-adiabatic propagator path integral methods. Exact quantum rate constants for condensed phase reactions
journal, July 1993
- Topaler, Maria; Makri, Nancy
- Chemical Physics Letters, Vol. 210, Issue 1-3
Calculation of Exchange Frequencies in bcc with the Path-Integral Monte Carlo Method
journal, July 1987
- Ceperley, D. M.; Jacucci, G.
- Physical Review Letters, Vol. 59, Issue 3
A refined ring polymer molecular dynamics theory of chemical reaction rates
journal, July 2005
- Craig, Ian R.; Manolopoulos, David E.
- The Journal of Chemical Physics, Vol. 123, Issue 3
Application of a multilevel Redfield theory to electron transfer in condensed phases
journal, April 1992
- Jean, John M.; Friesner, Richard A.; Fleming, Graham R.
- The Journal of Chemical Physics, Vol. 96, Issue 8, p. 5827-5842
Mixed quantum-classical equilibrium: Surface hopping
journal, July 2008
- Schmidt, J. R.; Parandekar, Priya V.; Tully, John C.
- The Journal of Chemical Physics, Vol. 129, Issue 4
Exchange reactions and electron transfer reactions including isotopic exchange. Theory of oxidation-reduction reactions involving electron transfer. Part 4.—A statistical-mechanical basis for treating contributions from solvent, ligands, and inert salt
journal, January 1960
- Marcus, R. A.
- Discuss. Faraday Soc., Vol. 29, Issue 0
A relationship between centroid dynamics and path integral quantum transition state theory
journal, May 2000
- Jang, Seogjoo; Voth, Gregory A.
- The Journal of Chemical Physics, Vol. 112, Issue 20
Electron transfer reactions in chemistry. Theory and experiment
journal, July 1993
- Marcus, Rudolph A.
- Reviews of Modern Physics, Vol. 65, Issue 3, p. 599-610
Ab Initio Multiple Spawning: Photochemistry from First Principles Quantum Molecular Dynamics
journal, June 2000
- Ben-Nun, M.; Quenneville, Jason; Martínez, Todd J.
- The Journal of Physical Chemistry A, Vol. 104, Issue 22
Sum rule constraints on Kubo-transformed correlation functions
journal, January 2006
- Braams, Bastiaan J.; Miller, Thomas F.; Manolopoulos, David E.
- Chemical Physics Letters, Vol. 418, Issue 1-3
Calculation of the transition state theory rate constant for a general reaction coordinate: Application to hydride transfer in an enzyme
journal, January 2006
- Watney, James B.; Soudackov, Alexander V.; Wong, Kim F.
- Chemical Physics Letters, Vol. 418, Issue 1-3
THE weighted histogram analysis method for free-energy calculations on biomolecules. I. The method
journal, October 1992
- Kumar, Shankar; Rosenberg, John M.; Bouzida, Djamal
- Journal of Computational Chemistry, Vol. 13, Issue 8
Isomorphic classical molecular dynamics model for an excess electron in a supercritical fluid
journal, November 2008
- Miller, Thomas F.
- The Journal of Chemical Physics, Vol. 129, Issue 19
Generalized transition state theory in terms of the potential of mean force
journal, September 2003
- Schenter, Gregory K.; Garrett, Bruce C.; Truhlar, Donald G.
- The Journal of Chemical Physics, Vol. 119, Issue 12
On the equivalence of two commonly used forms of semiclassical instanton theory
journal, March 2011
- Althorpe, Stuart C.
- The Journal of Chemical Physics, Vol. 134, Issue 11
Semiclassical transition state theory for nonseparable systems: Application to the collinear H+H 2 reaction
journal, September 1975
- Chapman, Sally; Garrett, Bruce C.; Miller, William H.
- The Journal of Chemical Physics, Vol. 63, Issue 6
DL_POLY_2.0: A general-purpose parallel molecular dynamics simulation package
journal, June 1996
- Smith, W.; Forester, T. R.
- Journal of Molecular Graphics, Vol. 14, Issue 3, p. 136-141
Classical and Quantum Simulation of Electron Transfer Through a Polypeptide
journal, August 1999
- Ungar, Lowell W.; Newton, Marshall D.; Voth, Gregory A.
- The Journal of Physical Chemistry B, Vol. 103, Issue 34
Simplified and improved string method for computing the minimum energy paths in barrier-crossing events
journal, April 2007
- E., Weinan; Ren, Weiqing; Vanden-Eijnden, Eric
- The Journal of Chemical Physics, Vol. 126, Issue 16
A novel discrete variable representation for quantum mechanical reactive scattering via the S ‐matrix Kohn method
journal, February 1992
- Colbert, Daniel T.; Miller, William H.
- The Journal of Chemical Physics, Vol. 96, Issue 3
Path‐integral calculation of the tunnel splitting in aqueous ferrous–ferric electron transfer
journal, July 1991
- Marchi, Massimo; Chandler, David
- The Journal of Chemical Physics, Vol. 95, Issue 2
Quantum tunnelling in a dissipative system
journal, September 1983
- Caldeira, A. O.; Leggett, A. J.
- Annals of Physics, Vol. 149, Issue 2
Competing quantum effects in the dynamics of a flexible water model
journal, July 2009
- Habershon, Scott; Markland, Thomas E.; Manolopoulos, David E.
- The Journal of Chemical Physics, Vol. 131, Issue 2
Quantum fluctuations can promote or inhibit glass formation
journal, January 2011
- Markland, Thomas E.; Morrone, Joseph A.; Berne, Bruce J.
- Nature Physics, Vol. 7, Issue 2
Molecular dynamics with electronic transitions
journal, July 1990
- Tully, John C.
- The Journal of Chemical Physics, Vol. 93, Issue 2
The theory of a general quantum system interacting with a linear dissipative system
journal, October 1963
- Feynman, R. P.; Vernon, F. L.
- Annals of Physics, Vol. 24
Analysis and extension of some recently proposed classical models for electronic degrees of freedom
journal, February 1980
- Meyer, Hans‐Dieter; Miller, William H.
- The Journal of Chemical Physics, Vol. 72, Issue 4
Über das Überschreiten von Potentialschwellen bei chemischen Reaktionen
journal, September 1932
- Wigner, E.
- Zeitschrift für Physikalische Chemie, Vol. 19B, Issue 1
Quantum fluctuations can promote or inhibit glass formation
text, January 2010
- Markland, Thomas E.; Morrone, Joseph A.; Berne, B. J.
- arXiv
Works referencing / citing this record:
Communication: Predictive partial linearized path integral simulation of condensed phase electron transfer dynamics
journal, October 2013
- Huo, Pengfei; Miller, Thomas F.; Coker, David F.
- The Journal of Chemical Physics, Vol. 139, Issue 15
Non-equilibrium dynamics from RPMD and CMD
journal, November 2016
- Welsch, Ralph; Song, Kai; Shi, Qiang
- The Journal of Chemical Physics, Vol. 145, Issue 20
A mapping variable ring polymer molecular dynamics study of condensed phase proton-coupled electron transfer
journal, December 2017
- Pierre, Sadrach; Duke, Jessica R.; Hele, Timothy J. H.
- The Journal of Chemical Physics, Vol. 147, Issue 23
Communication: Nonadiabatic ring-polymer molecular dynamics
journal, July 2013
- Richardson, Jeremy O.; Thoss, Michael
- The Journal of Chemical Physics, Vol. 139, Issue 3
Kinetically constrained ring-polymer molecular dynamics for non-adiabatic chemical reactions
journal, February 2014
- Menzeleev, Artur R.; Bell, Franziska; Miller, Thomas F.
- The Journal of Chemical Physics, Vol. 140, Issue 6
How to remove the spurious resonances from ring polymer molecular dynamics
journal, June 2014
- Rossi, Mariana; Ceriotti, Michele; Manolopoulos, David E.
- The Journal of Chemical Physics, Vol. 140, Issue 23
Instanton formulation of Fermi’s golden rule in the Marcus inverted regime
text, January 2020
- Heller, Eric R.; Richardson, Jeremy
- ETH Zurich
A mapping variable ring polymer molecular dynamics study of condensed phase proton-coupled electron transfer.
text, January 2017
- Pierre, Sadrach; Duke, Jessica R.; Hele, Tim
- Apollo - University of Cambridge Repository
Theoretical Investigation of the Electron-Transfer Dynamics and Photodegradation Pathways in a Hydrogen-Evolving Ruthenium-Palladium Photocatalyst
journal, June 2018
- Staniszewska, Magdalena; Kupfer, Stephan; Guthmuller, Julien
- Chemistry - A European Journal, Vol. 24, Issue 43
Non-equilibrium dynamics from RPMD and CMD
text, January 2016
- Welsch, R.; Song, K.; Shi, Q.
- Apollo - University of Cambridge Repository
Communication: Full dimensional quantum rate coefficients and kinetic isotope effects from ring polymer molecular dynamics for a seven-atom reaction OH + CH 4 → CH 3 + H 2 O
journal, June 2013
- Allen, Joshua W.; Green, William H.; Li, Yongle
- The Journal of Chemical Physics, Vol. 138, Issue 22
Direct simulation of electron transfer in the cobalt hexammine( ii / iii ) self-exchange reaction
journal, January 2016
- Kenion, Rachel L.; Ananth, Nandini
- Physical Chemistry Chemical Physics, Vol. 18, Issue 37
Perspective: Ring-polymer instanton theory
journal, May 2018
- Richardson, Jeremy O.
- The Journal of Chemical Physics, Vol. 148, Issue 20
Boltzmann-conserving classical dynamics in quantum time-correlation functions: “Matsubara dynamics”
journal, April 2015
- Hele, Timothy J. H.; Willatt, Michael J.; Muolo, Andrea
- The Journal of Chemical Physics, Vol. 142, Issue 13
Semiclassical dynamics in the mixed quantum-classical limit
journal, October 2019
- Church, Matthew S.; Ananth, Nandini
- The Journal of Chemical Physics, Vol. 151, Issue 13
Dynamically consistent method for mixed quantum-classical simulations: A semiclassical approach
journal, May 2015
- Antipov, Sergey V.; Ye, Ziyu; Ananth, Nandini
- The Journal of Chemical Physics, Vol. 142, Issue 18
Semiclassical Green’s functions and an instanton formulation of electron-transfer rates in the nonadiabatic limit
journal, October 2015
- Richardson, Jeremy O.; Bauer, Rainer; Thoss, Michael
- The Journal of Chemical Physics, Vol. 143, Issue 13
Ring-polymer instanton theory of electron transfer in the nonadiabatic limit
journal, October 2015
- Richardson, Jeremy O.
- The Journal of Chemical Physics, Vol. 143, Issue 13
On the calculation of quantum mechanical electron transfer rates
journal, September 2019
- Lawrence, Joseph E.; Fletcher, Theo; Lindoy, Lachlan P.
- The Journal of Chemical Physics, Vol. 151, Issue 11
Mean field ring polymer molecular dynamics for electronically nonadiabatic reaction rates
journal, January 2016
- Duke, Jessica Ryan; Ananth, Nandini
- Faraday Discussions, Vol. 195
Mapping variable ring polymer molecular dynamics: A path-integral based method for nonadiabatic processes
journal, September 2013
- Ananth, Nandini
- The Journal of Chemical Physics, Vol. 139, Issue 12
Analytic continuation of Wolynes theory into the Marcus inverted regime
journal, March 2018
- Lawrence, Joseph E.; Manolopoulos, David E.
- The Journal of Chemical Physics, Vol. 148, Issue 10
Instanton formulation of Fermi’s golden rule in the Marcus inverted regime
journal, January 2020
- Heller, Eric R.; Richardson, Jeremy O.
- The Journal of Chemical Physics, Vol. 152, Issue 3
Simplified approach to the mixed time-averaging semiclassical initial value representation for the calculation of dense vibrational spectra
journal, March 2018
- Buchholz, Max; Grossmann, Frank; Ceotto, Michele
- The Journal of Chemical Physics, Vol. 148, Issue 11
Direct simulation of proton-coupled electron transfer across multiple regimes
journal, April 2013
- Kretchmer, Joshua S.; Miller, Thomas F.
- The Journal of Chemical Physics, Vol. 138, Issue 13
Derivation of a true ( t → 0 + ) quantum transition-state theory. I. Uniqueness and equivalence to ring-polymer molecular dynamics transition-state-theory
journal, February 2013
- Hele, Timothy J. H.; Althorpe, Stuart C.
- The Journal of Chemical Physics, Vol. 138, Issue 8
Validating and implementing modified Filinov phase filtration in semiclassical dynamics
journal, June 2017
- Church, Matthew S.; Antipov, Sergey V.; Ananth, Nandini
- The Journal of Chemical Physics, Vol. 146, Issue 23
Nonadiabatic quantum transition-state theory in the golden-rule limit. I. Theory and application to model systems
journal, March 2019
- Thapa, Manish J.; Fang, Wei; Richardson, Jeremy O.
- The Journal of Chemical Physics, Vol. 150, Issue 10
Nonadiabatic quantum transition-state theory in the golden-rule limit. I. Theory and application to model systems
text, January 2019
- Thapa, Manish J.; Fang, Wei; Richardson, Jeremy O.
- ETH Zurich
Kinetically-constrained ring-polymer molecular dynamics for non-adiabatic chemistries involving solvent and donor–acceptor dynamical effects
journal, January 2016
- Kretchmer, Joshua S.; Miller III, Thomas F.
- Faraday Discussions, Vol. 195
State dependent ring polymer molecular dynamics for investigating excited nonadiabatic dynamics
journal, June 2019
- Chowdhury, Sutirtha N.; Huo, Pengfei
- The Journal of Chemical Physics, Vol. 150, Issue 24
Ring polymer molecular dynamics with surface hopping
journal, December 2012
- Shushkov, Philip; Li, Richard; Tully, John C.
- The Journal of Chemical Physics, Vol. 137, Issue 22
Coherent state mapping ring polymer molecular dynamics for non-adiabatic quantum propagations
journal, December 2017
- Chowdhury, Sutirtha N.; Huo, Pengfei
- The Journal of Chemical Physics, Vol. 147, Issue 21
Mapping Variable Ring Polymer Molecular Dynamics: A Path-Integral Based Method for Nonadiabatic Processes
text, January 2013
- Ananth, Nandini
- arXiv
Kinetically Constrained Ring-Polymer Molecular Dynamics for Non-adiabatic Chemical Reactions
text, January 2014
- Menzeleev, Artur R.; Bell, Franziska; Miller, Thomas F.
- arXiv
How to remove the spurious resonances from ring polymer molecular dynamics
text, January 2014
- Rossi, Mariana; Ceriotti, Michele; Manolopoulos, David E.
- arXiv
Analytic continuation of Wolynes theory into the Marcus inverted regime
text, January 2017
- Lawrence, Joseph E.; Manolopoulos, David E.
- arXiv
Instanton formulation of Fermi's golden rule in the Marcus inverted regime
text, January 2019
- Heller, Eric R.; Richardson, Jeremy O.
- arXiv
Isotopic Separation of Helium through Nanoporous Graphene Membranes: A Ring Polymer Molecular Dynamics Study
text, January 2021
- Bhowmick, Somnath; Hernández, Marta I.; Campos-Martínez, José
- arXiv