DOE PAGES title logo U.S. Department of Energy
Office of Scientific and Technical Information

Title: Simulation of X-ray transient absorption for following vibrations in coherently ionized F2 molecules

Abstract

We report femtosecond and attosecond X-ray transient absorption experiments are becoming increasingly sophisticated tools for probing nuclear dynamics. In this work, we explore and develop theoretical tools needed for interpretation of such spectra,in order to characterize the vibrational coherences that result from ionizing a molecule in a strong IR field. Ab initio data for F2 is combined with simulations of nuclear dynamics, in order to simulate time-resolved X-ray absorption spectra for vibrational wavepackets after coherent ionization at 0 K and at finite temperature. Dihalogens pose rather difficult electronic structure problems, and the issues encountered in this work will be reflective of those encountered with any core–valence excitation simulation when a bond is breaking. The simulations reveal a strong dependence of the X-ray absorption maximum on the locations of the vibrational wave packets. A Fourier transform of the simulated signal shows features at the overtone frequencies of both the neutral and the cation, which reflect spatial interferences of the vibrational eigenstates. This provides a direct path for implementing ultrafast X-ray spectroscopic methods to visualize coherent nuclear dynamics.

Authors:
 [1];  [2]
  1. University of the Pacific, Stockton, CA (United States)
  2. Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States); University of California, Berkeley, CA (United States)
Publication Date:
Research Org.:
Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States)
Sponsoring Org.:
USDOE Office of Science (SC); National Science Foundation (NSF)
OSTI Identifier:
1532223
Alternate Identifier(s):
OSTI ID: 1419141
Grant/Contract Number:  
AC02-05CH11231; CHE-1361226
Resource Type:
Accepted Manuscript
Journal Name:
Chemical Physics
Additional Journal Information:
Journal Volume: 482; Journal Issue: C; Journal ID: ISSN 0301-0104
Publisher:
Elsevier
Country of Publication:
United States
Language:
English
Subject:
37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CHEMISTRY

Citation Formats

Dutoi, Anthony D., and Leone, Stephen R. Simulation of X-ray transient absorption for following vibrations in coherently ionized F2 molecules. United States: N. p., 2016. Web. doi:10.1016/j.chemphys.2016.10.006.
Dutoi, Anthony D., & Leone, Stephen R. Simulation of X-ray transient absorption for following vibrations in coherently ionized F2 molecules. United States. https://doi.org/10.1016/j.chemphys.2016.10.006
Dutoi, Anthony D., and Leone, Stephen R. Thu . "Simulation of X-ray transient absorption for following vibrations in coherently ionized F2 molecules". United States. https://doi.org/10.1016/j.chemphys.2016.10.006. https://www.osti.gov/servlets/purl/1532223.
@article{osti_1532223,
title = {Simulation of X-ray transient absorption for following vibrations in coherently ionized F2 molecules},
author = {Dutoi, Anthony D. and Leone, Stephen R.},
abstractNote = {We report femtosecond and attosecond X-ray transient absorption experiments are becoming increasingly sophisticated tools for probing nuclear dynamics. In this work, we explore and develop theoretical tools needed for interpretation of such spectra,in order to characterize the vibrational coherences that result from ionizing a molecule in a strong IR field. Ab initio data for F2 is combined with simulations of nuclear dynamics, in order to simulate time-resolved X-ray absorption spectra for vibrational wavepackets after coherent ionization at 0 K and at finite temperature. Dihalogens pose rather difficult electronic structure problems, and the issues encountered in this work will be reflective of those encountered with any core–valence excitation simulation when a bond is breaking. The simulations reveal a strong dependence of the X-ray absorption maximum on the locations of the vibrational wave packets. A Fourier transform of the simulated signal shows features at the overtone frequencies of both the neutral and the cation, which reflect spatial interferences of the vibrational eigenstates. This provides a direct path for implementing ultrafast X-ray spectroscopic methods to visualize coherent nuclear dynamics.},
doi = {10.1016/j.chemphys.2016.10.006},
journal = {Chemical Physics},
number = C,
volume = 482,
place = {United States},
year = {Thu Oct 06 00:00:00 EDT 2016},
month = {Thu Oct 06 00:00:00 EDT 2016}
}

Journal Article:

Citation Metrics:
Cited by: 9 works
Citation information provided by
Web of Science

Save / Share:

Works referenced in this record:

Theory of high-harmonic generation by low-frequency laser fields
journal, March 1994


Atomic transient recorder
journal, February 2004

  • Kienberger, R.; Goulielmakis, E.; Uiberacker, M.
  • Nature, Vol. 427, Issue 6977
  • DOI: 10.1038/nature02277

The attosecond nonlinear optics of bright coherent X-ray generation
journal, November 2010


Ultrafast strong-field dissociative ionization dynamics of CH2Br2 probed by femtosecond soft x-ray transient absorption spectroscopy
journal, May 2008

  • Loh, Zhi-Heng; Leone, Stephen R.
  • The Journal of Chemical Physics, Vol. 128, Issue 20
  • DOI: 10.1063/1.2925268

Real-time observation of valence electron motion
journal, August 2010

  • Goulielmakis, Eleftherios; Loh, Zhi-Heng; Wirth, Adrian
  • Nature, Vol. 466, Issue 7307
  • DOI: 10.1038/nature09212

Characterization of vibrational wave packets by core-level high-harmonic transient absorption spectroscopy
journal, August 2013


Sub-pulselength time resolution of bond softening and Coulomb explosion using polarization control of laser-induced alignment
journal, January 1999

  • Posthumus, J. H.; Plumridge, J.; Taday, P. F.
  • Journal of Physics B: Atomic, Molecular and Optical Physics, Vol. 32, Issue 5
  • DOI: 10.1088/0953-4075/32/5/029

Formation of Ground-State Vibrational Wave Packets in Intense Ultrashort Laser Pulses
journal, September 2006


Quantum-Phase Resolved Mapping of Ground-State Vibrational D 2 Wave Packets via Selective Depletion in Intense Laser Pulses
journal, September 2006


Strong-Field Induced Vibrational Coherence in the Ground Electronic State of Hot I 2
journal, March 2008


The Hartree-Fock dissociation of F2
journal, March 1987

  • Gordon, Mark S.; Truhlar, Donald G.
  • Theoretica Chimica Acta, Vol. 71, Issue 1
  • DOI: 10.1007/BF00538477

A coupled‐cluster study of inversion symmetry breaking in the F + 2 molecular ion
journal, November 1991

  • Watts, John D.; Bartlett, Rodney J.
  • The Journal of Chemical Physics, Vol. 95, Issue 9
  • DOI: 10.1063/1.461535

Can density functional theory describe multi-reference systems? Investigation of carbenes and organic biradicals
journal, January 2000

  • Gräfenstein, Jürgen; Cremer, Dieter
  • Physical Chemistry Chemical Physics, Vol. 2, Issue 10
  • DOI: 10.1039/a909905k

The spin–flip approach within time-dependent density functional theory: Theory and applications to diradicals
journal, March 2003

  • Shao, Yihan; Head-Gordon, Martin; Krylov, Anna I.
  • The Journal of Chemical Physics, Vol. 118, Issue 11
  • DOI: 10.1063/1.1545679

Advances in molecular quantum chemistry contained in the Q-Chem 4 program package
journal, September 2014


CCSD(T) calculations of vibrational frequencies and equilibrium geometries for the diatomics F2, SF, and their ions
journal, July 1999


The performance of density functional theory for equilibrium molecular properties of symmetry breaking molecules
journal, May 2001

  • Cohen, Ryan D.; Sherrill, C. David
  • The Journal of Chemical Physics, Vol. 114, Issue 19
  • DOI: 10.1063/1.1365419

Approaching closed-shell accuracy for radicals using coupled cluster theory with perturbative triple substitutions
journal, January 2003

  • Beran, Gregory J. O.; Gwaltney, Steven R.; Head-Gordon, Martin
  • Physical Chemistry Chemical Physics, Vol. 5, Issue 12
  • DOI: 10.1039/b304542k

Geometries and Vibrational Frequencies of Small Radicals: Performance of Coupled Cluster and More Approximate Methods
journal, May 2012

  • Tentscher, Peter R.; Arey, J. Samuel
  • Journal of Chemical Theory and Computation, Vol. 8, Issue 6
  • DOI: 10.1021/ct300194x

Photoelectron spectra of the halogens and mixed halides ICl and IBr
journal, January 1971


TheÃ2Πu[Xtilde]2Πgelectronic emission spectrum of the fluorine molecular ion F2+studied in a supersonic beam
journal, June 1983


High-resolution threshold photoelectron spectroscopy of molecular fluorine
journal, December 1996


A combined zero electronic kinetic energy spectroscopy and ion-pair dissociation imaging study of the F2+(XΠg2) structure
journal, April 2005

  • Yang, Jie; Hao, Yusong; Li, Juan
  • The Journal of Chemical Physics, Vol. 122, Issue 13
  • DOI: 10.1063/1.1867332

Beyond the random-phase approximation: A new approximation scheme for the polarization propagator
journal, November 1982


An efficient polarization propagator approach to valence electron excitation spectra
journal, June 1995

  • Trofimov, A. B.; Schirmer, J.
  • Journal of Physics B: Atomic, Molecular and Optical Physics, Vol. 28, Issue 12
  • DOI: 10.1088/0953-4075/28/12/003

Theoretical core-level excitation spectra of N 2 and CO by a new polarisation propagator method
journal, March 1985


Double vacancies in the cores of silane and tetrafluorosilane
journal, July 1991

  • Ohrendorf, E. M. -L.; Cederbaum, L. S.; Tarantelli, F.
  • Physical Review A, Vol. 44, Issue 1
  • DOI: 10.1103/PhysRevA.44.205

K -shell excitation of the water, ammonia, and methane molecules using high-resolution photoabsorption spectroscopy
journal, February 1993


The ab initio calculation of very many triply ionized states of molecular systems
journal, December 1995

  • Handke, G.; Tarantelli, F.; Tarantelli, A.
  • Journal of Electron Spectroscopy and Related Phenomena, Vol. 75
  • DOI: 10.1016/0368-2048(95)02380-1

Potential energy surfaces and dynamics in core‐ionized and core‐excited states
journal, July 1995

  • Schulte, H. D.; Cederbaum, L. S.
  • The Journal of Chemical Physics, Vol. 103, Issue 2
  • DOI: 10.1063/1.470104

Multistate vibronic coupling effects in the K-shell excitation spectrum of ethylene: Symmetry breaking and core-hole localization
journal, March 1997

  • Köppel, H.; Gadea, F. X.; Klatt, G.
  • The Journal of Chemical Physics, Vol. 106, Issue 11
  • DOI: 10.1063/1.473488

Giant Intermolecular Decay and Fragmentation of Clusters
journal, December 1997


Correlation effects in the valence x-ray photoionization spectra of ethylene, butadiene, and hexatriene
journal, January 1997


Highly excited electronic states of molecular clusters and their decay
journal, June 1998

  • Zobeley, J.; Cederbaum, L. S.; Tarantelli, F.
  • The Journal of Chemical Physics, Vol. 108, Issue 23
  • DOI: 10.1063/1.476448

Theoretical study ofK-shell excitations in formaldehyde
journal, July 2001


Fingerprints of the nodal structure of autoionizing vibrational wave functions in clusters: Interatomic Coulombic decay in Ne dimer
journal, May 2001

  • Moiseyev, Nimrod; Santra, Robin; Zobeley, Jürgen
  • The Journal of Chemical Physics, Vol. 114, Issue 17
  • DOI: 10.1063/1.1361070

Electron Correlation as the Driving Force for Charge Transfer:  Charge Migration Following Ionization in N -Methyl Acetamide
journal, January 2005

  • Hennig, Holger; Breidbach, Jörg; Cederbaum, Lorenz S.
  • The Journal of Physical Chemistry A, Vol. 109, Issue 3
  • DOI: 10.1021/jp046232s

Charge migration in different conformers of glycine: The role of nuclear geometry
journal, September 2007


Tracing Ultrafast Interatomic Electronic Decay Processes in Real Time and Space
journal, February 2007


C 1s near edge X-ray absorption fine structure (NEXAFS) of substituted benzoic acids—A theoretical and experimental study
journal, February 2007

  • Bâldea, I.; Schimmelpfennig, B.; Plaschke, M.
  • Journal of Electron Spectroscopy and Related Phenomena, Vol. 154, Issue 3
  • DOI: 10.1016/j.elspec.2006.12.024

X-Ray Two-Photon Photoelectron Spectroscopy: A Theoretical Study of Inner-Shell Spectra of the Organic Para-Aminophenol Molecule
journal, July 2009


Tautomerism in Cytosine and Uracil: A Theoretical and Experimental X-ray Absorption and Resonant Auger Study
journal, September 2010

  • Feyer, Vitaliy; Plekan, Oksana; Richter, Robert
  • The Journal of Physical Chemistry A, Vol. 114, Issue 37
  • DOI: 10.1021/jp105062c

Time-resolved pump-probe spectroscopy to follow valence electronic motion in molecules: Application
journal, August 2014


Calculating X-ray Absorption Spectra of Open-Shell Molecules with the Unrestricted Algebraic-Diagrammatic Construction Scheme for the Polarization Propagator
journal, September 2014

  • Wenzel, Jan; Wormit, Michael; Dreuw, Andreas
  • Journal of Chemical Theory and Computation, Vol. 10, Issue 10
  • DOI: 10.1021/ct5006888

Site- and energy-selective slow-electron production through intermolecular Coulombic decay
journal, December 2013

  • Gokhberg, Kirill; Kolorenč, Přemysl; Kuleff, Alexander I.
  • Nature, Vol. 505, Issue 7485
  • DOI: 10.1038/nature12936

Relativistic decay widths of autoionization processes: The relativistic FanoADC-Stieltjes method
journal, April 2015

  • Fasshauer, Elke; Kolorenč, Přemysl; Pernpointner, Markus
  • The Journal of Chemical Physics, Vol. 142, Issue 14
  • DOI: 10.1063/1.4917255

Physical Properties, Exciton Analysis, and Visualization of Core-Excited States: An Intermediate State Representation Approach
journal, February 2016

  • Wenzel, Jan; Dreuw, Andreas
  • Journal of Chemical Theory and Computation, Vol. 12, Issue 3
  • DOI: 10.1021/acs.jctc.5b01161

The role of metal ions in X-ray-induced photochemistry
journal, January 2016

  • Stumpf, V.; Gokhberg, K.; Cederbaum, L. S.
  • Nature Chemistry, Vol. 8, Issue 3
  • DOI: 10.1038/nchem.2429

Computational Variants of the Lanczos Method for the Eigenproblem
journal, January 1972


A comparison of different propagation schemes for the time dependent Schrödinger equation
journal, May 1991


Works referencing / citing this record:

Ab initio investigation of Br-3 d core-excited states in HBr and HBr + toward XUV probing of photochemical dynamics
journal, January 2019

  • Kobayashi, Yuki; Zeng, Tao; Neumark, Daniel M.
  • Structural Dynamics, Vol. 6, Issue 1
  • DOI: 10.1063/1.5085011