Macroecology to Unite All Life, Large and Small
Abstract
Macroecology is the study of the mechanisms underlying general patterns of ecology across scales. Research in microbial ecology and macroecology have long been detached. In this work, we argue that it is time to bridge the gap, as they share a common currency of species and individuals, and a common tenet of understanding the causes and consequences of changes in biodiversity. Microbial ecology and macroecology will mutually benefit from a unified research agenda and shared datasets that span the entirety of the biodiversity of life and the geographic expanse of the Earth.
- Authors:
-
[1];
- Plant Resilience Inst., East Lansing, MI (United States)
- North Carolina State Univ., Raleigh, NC (United States); Univ. of Copenhagen, Copenhagen (Denmark); German Centre for Integrative Biodiversity Research (iDiv), Leipzig (Germany)
- German Centre for Integrative Biodiversity Research (iDiv), Leipzig (Germany)
- Univ. of Oregon, Eugene, OR (United States)
- German Centre for Integrative Biodiversity Research (iDiv), Leipzig (Germany); Friedrich Schiller Univ., Jena (Germany)
- Indiana Univ., Bloomington, IN (United States)
- Univ. of Copenhagen, Copenhagen (Denmark); Univ. of Vermont, Burlington, VT (United States)
- Academy of Sciences of the Czech Republic (ASCR), Prague (Czech Republic); Charles Univ., Prague (Czech Republic)
- German Centre for Integrative Biodiversity Research (iDiv), Leipzig (Germany); Martin Luther Univ., Saxony-Anhalt (Germany)
- Publication Date:
- Research Org.:
- Univ. of Wisconsin, Madison, WI (United States)
- Sponsoring Org.:
- USDOE Office of Science (SC), Biological and Environmental Research (BER)
- OSTI Identifier:
- 1506669
- Alternate Identifier(s):
- OSTI ID: 1636260
- Grant/Contract Number:
- SC0018409
- Resource Type:
- Accepted Manuscript
- Journal Name:
- Trends in Ecology and Evolution
- Additional Journal Information:
- Journal Volume: 33; Journal Issue: 10; Journal ID: ISSN 0169-5347
- Country of Publication:
- United States
- Language:
- English
- Subject:
- 59 BASIC BIOLOGICAL SCIENCES; species–area relationship; rarefaction; diversity gradient; species abundance distribution; distance decay; metabolic theory of ecology; abundance occupancy; metagenomics; microbiome
Citation Formats
Shade, Ashley, Dunn, Robert R., Blowes, Shane A., Keil, Petr, Bohannan, Brendan J. M., Herrmann, Martina, Küsel, Kirsten, Lennon, Jay T., Sanders, Nathan J., Storch, David, and Chase, Jonathan. Macroecology to Unite All Life, Large and Small. United States: N. p., 2018.
Web. doi:10.1016/j.tree.2018.08.005.
Shade, Ashley, Dunn, Robert R., Blowes, Shane A., Keil, Petr, Bohannan, Brendan J. M., Herrmann, Martina, Küsel, Kirsten, Lennon, Jay T., Sanders, Nathan J., Storch, David, & Chase, Jonathan. Macroecology to Unite All Life, Large and Small. United States. https://doi.org/10.1016/j.tree.2018.08.005
Shade, Ashley, Dunn, Robert R., Blowes, Shane A., Keil, Petr, Bohannan, Brendan J. M., Herrmann, Martina, Küsel, Kirsten, Lennon, Jay T., Sanders, Nathan J., Storch, David, and Chase, Jonathan. Sun .
"Macroecology to Unite All Life, Large and Small". United States. https://doi.org/10.1016/j.tree.2018.08.005. https://www.osti.gov/servlets/purl/1506669.
@article{osti_1506669,
title = {Macroecology to Unite All Life, Large and Small},
author = {Shade, Ashley and Dunn, Robert R. and Blowes, Shane A. and Keil, Petr and Bohannan, Brendan J. M. and Herrmann, Martina and Küsel, Kirsten and Lennon, Jay T. and Sanders, Nathan J. and Storch, David and Chase, Jonathan},
abstractNote = {Macroecology is the study of the mechanisms underlying general patterns of ecology across scales. Research in microbial ecology and macroecology have long been detached. In this work, we argue that it is time to bridge the gap, as they share a common currency of species and individuals, and a common tenet of understanding the causes and consequences of changes in biodiversity. Microbial ecology and macroecology will mutually benefit from a unified research agenda and shared datasets that span the entirety of the biodiversity of life and the geographic expanse of the Earth.},
doi = {10.1016/j.tree.2018.08.005},
journal = {Trends in Ecology and Evolution},
number = 10,
volume = 33,
place = {United States},
year = {Sun Sep 09 00:00:00 EDT 2018},
month = {Sun Sep 09 00:00:00 EDT 2018}
}
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Works referenced in this record:
Biodiversity research requires more boots on the ground
journal, October 2017
- Wilson, Edward O.
- Nature Ecology & Evolution, Vol. 1, Issue 11
Abundance-occupancy relationships
journal, September 2000
- Gaston, Kevin J.; Blackburn, Tim M.; Greenwood, Jeremy J. D.
- Journal of Applied Ecology, Vol. 37, Issue s1
The role of ecological theory in microbial ecology
journal, May 2007
- Prosser, James I.; Bohannan, Brendan J. M.; Curtis, Tom P.
- Nature Reviews Microbiology, Vol. 5, Issue 5
The distance decay of similarity in ecological communities
journal, February 2007
- Soininen, Janne; McDonald, Robert; Hillebrand, Helmut
- Ecography, Vol. 30, Issue 1
Distance decay of similarity in freshwater communities: do macro- and microorganisms follow the same rules?: Decay of similarity in freshwater communities
journal, June 2011
- Astorga, Anna; Oksanen, Jari; Luoto, Miska
- Global Ecology and Biogeography, Vol. 21, Issue 3
Microbes do not follow the elevational diversity patterns of plants and animals
journal, April 2011
- Fierer, Noah; McCain, Christy M.; Meir, Patrick
- Ecology, Vol. 92, Issue 4
Microbes on mountainsides: Contrasting elevational patterns of bacterial and plant diversity
journal, August 2008
- Bryant, J. A.; Lamanna, C.; Morlon, H.
- Proceedings of the National Academy of Sciences, Vol. 105, Issue Supplement 1
Body size determines the strength of the latitudinal diversity gradient
journal, June 2001
- Hillebrand, Helmut; Azovsky, Andrey I.
- Ecography, Vol. 24, Issue 3
A latitudinal diversity gradient in planktonic marine bacteria
journal, May 2008
- Fuhrman, J. A.; Steele, J. A.; Hewson, I.
- Proceedings of the National Academy of Sciences, Vol. 105, Issue 22
'Everything is everywhere, but, the environment selects'; what did Baas Becking and Beijerinck really say?
journal, April 2006
- de Wit, Rutger; Bouvier, Thierry
- Environmental Microbiology, Vol. 8, Issue 4
Spatial scaling of microbial eukaryote diversity
journal, December 2004
- Green, Jessica L.; Holmes, Andrew J.; Westoby, Mark
- Nature, Vol. 432, Issue 7018
Microbial biogeography: putting microorganisms on the map
journal, February 2006
- Martiny, Jennifer B. Hughes; Bohannan, Brendan J. M.; Brown, James H.
- Nature Reviews Microbiology, Vol. 4, Issue 2
Beyond biogeographic patterns: processes shaping the microbial landscape
journal, May 2012
- Hanson, China A.; Fuhrman, Jed A.; Horner-Devine, M. Claire
- Nature Reviews Microbiology, Vol. 10, Issue 7
A new view of the tree of life
journal, April 2016
- Hug, Laura A.; Baker, Brett J.; Anantharaman, Karthik
- Nature Microbiology, Vol. 1, Issue 5
A communal catalogue reveals Earth’s multiscale microbial diversity
journal, November 2017
- Thompson, Luke R.; Sanders, Jon G.; McDonald, Daniel
- Nature, Vol. 551, Issue 7681
Recovery of nearly 8,000 metagenome-assembled genomes substantially expands the tree of life
journal, September 2017
- Parks, Donovan H.; Rinke, Christian; Chuvochina, Maria
- Nature Microbiology, Vol. 2, Issue 11
The nineteenth century roots of 'everything is everywhere'
journal, August 2007
- O'Malley, Maureen A.
- Nature Reviews Microbiology, Vol. 5, Issue 8
Microbial macroecology: highly structured prokaryotic soil assemblages in a tropical deciduous forest: Prokaryotic macroecology
journal, May 2005
- Noguez, Ana M.; Arita, Héctor T.; Escalante, Ana E.
- Global Ecology and Biogeography, Vol. 14, Issue 3
Contribution of neutral processes to the assembly of gut microbial communities in the zebrafish over host development
journal, August 2015
- Burns, Adam R.; Stephens, W. Zac; Stagaman, Keaton
- The ISME Journal, Vol. 10, Issue 3
Detecting macroecological patterns in bacterial communities across independent studies of global soils
journal, November 2017
- Ramirez, Kelly S.; Knight, Christopher G.; de Hollander, Mattias
- Nature Microbiology, Vol. 3, Issue 2
Aligning the Measurement of Microbial Diversity with Macroecological Theory
journal, September 2016
- Stegen, James C.; Hurlbert, Allen H.; Bond-Lamberty, Ben
- Frontiers in Microbiology, Vol. 7
A macroecological theory of microbial biodiversity
journal, April 2017
- Shoemaker, William R.; Locey, Kenneth J.; Lennon, Jay T.
- Nature Ecology & Evolution, Vol. 1, Issue 5
A meta-analysis of changes in bacterial and archaeal communities with time
journal, April 2013
- Shade, Ashley; Gregory Caporaso, J.; Handelsman, Jo
- The ISME Journal, Vol. 7, Issue 8
Scaling laws predict global microbial diversity
journal, May 2016
- Locey, Kenneth J.; Lennon, Jay T.
- Proceedings of the National Academy of Sciences, Vol. 113, Issue 21
An extensive comparison of species-abundance distribution models
journal, January 2016
- Baldridge, Elita; Harris, David J.; Xiao, Xiao
- PeerJ, Vol. 4
New Allometric Scaling Laws Revealed for Microorganisms
journal, June 2017
- Kieft, Thomas L.
- Trends in Ecology & Evolution, Vol. 32, Issue 6
Mapping tree density at a global scale
journal, September 2015
- Crowther, T. W.; Glick, H. B.; Covey, K. R.
- Nature, Vol. 525, Issue 7568
Global distribution of microbial abundance and biomass in subseafloor sediment
journal, August 2012
- Kallmeyer, J.; Pockalny, R.; Adhikari, R. R.
- Proceedings of the National Academy of Sciences, Vol. 109, Issue 40
Prokaryotes: The unseen majority
journal, June 1998
- Whitman, W. B.; Coleman, D. C.; Wiebe, W. J.
- Proceedings of the National Academy of Sciences, Vol. 95, Issue 12
Counting the Uncountable: Statistical Approaches to Estimating Microbial Diversity
journal, October 2001
- Hughes, J. B.; Hellmann, J. J.; Ricketts, T. H.
- Applied and Environmental Microbiology, Vol. 67, Issue 10
How Many Species Are There on Earth and in the Ocean?
journal, August 2011
- Mora, Camilo; Tittensor, Derek P.; Adl, Sina
- PLoS Biology, Vol. 9, Issue 8
A statistical theory for sampling species abundances
journal, November 2007
- Green, Jessica L.; Plotkin, Joshua B.
- Ecology Letters, Vol. 10, Issue 11
Microbiomes in light of traits: A phylogenetic perspective
journal, November 2015
- Martiny, J. B. H.; Jones, S. E.; Lennon, J. T.
- Science, Vol. 350, Issue 6261
Biodiversity inventories, indicator taxa and effects of habitat modification in tropical forest
journal, January 1998
- Lawton, J. H.; Bignell, D. E.; Bolton, B.
- Nature, Vol. 391, Issue 6662
Modeling Taxa-Abundance Distributions in Microbial Communities using Environmental Sequence Data
journal, December 2006
- Sloan, William T.; Woodcock, Stephen; Lunn, Mary
- Microbial Ecology, Vol. 53, Issue 3
The importance of habitat heterogeneity, biotic interactions and dispersal in abundance-occupancy relationships: Abundance-occupancy relationships
journal, August 2004
- Holt, Alison R.; Warren, Philip H.; Gaston, Kevin J.
- Journal of Animal Ecology, Vol. 73, Issue 5
Disentangling mechanisms that mediate the balance between stochastic and deterministic processes in microbial succession
journal, March 2015
- Dini-Andreote, Francisco; Stegen, James C.; van Elsas, Jan Dirk
- Proceedings of the National Academy of Sciences, Vol. 112, Issue 11
Balance of Neutral and Deterministic Components in the Dynamics of Activated Sludge Floc Assembly
journal, October 2010
- Ayarza, Joaquín M.; Erijman, Leonardo
- Microbial Ecology, Vol. 61, Issue 3
The theory of the nested species-area relationship: geometric foundations of biodiversity scaling
journal, July 2016
- Storch, David
- Journal of Vegetation Science, Vol. 27, Issue 5
Spatial scaling of microbial biodiversity
journal, September 2006
- Green, Jessica; Bohannan, Brendan J. M.
- Trends in Ecology & Evolution, Vol. 21, Issue 9
A taxa–area relationship for bacteria
journal, December 2004
- Horner-Devine, M. Claire; Lage, Melissa; Hughes, Jennifer B.
- Nature, Vol. 432, Issue 7018
Spatial scaling of functional gene diversity across various microbial taxa
journal, May 2008
- Zhou, J.; Kang, S.; Schadt, C. W.
- Proceedings of the National Academy of Sciences, Vol. 105, Issue 22
Over 150 Years of Long-Term Fertilization Alters Spatial Scaling of Microbial Biodiversity
journal, April 2015
- Liang, Yuting; Wu, Liyou; Clark, Ian M.
- mBio, Vol. 6, Issue 2
Navigating the multiple meanings of β diversity: a roadmap for the practicing ecologist: Roadmap for beta diversity
journal, November 2010
- Anderson, Marti J.; Crist, Thomas O.; Chase, Jonathan M.
- Ecology Letters, Vol. 14, Issue 1
The distance decay of similarity in biogeography and ecology
journal, July 1999
- Nekola, Jeffrey C.; White, Peter S.
- Journal of Biogeography, Vol. 26, Issue 4
Experimental tests of the bacterial distance–decay relationship
journal, June 2010
- Bell, Thomas
- The ISME Journal, Vol. 4, Issue 11
Drivers of bacterial -diversity depend on spatial scale
journal, April 2011
- Martiny, J. B. H.; Eisen, J. A.; Penn, K.
- Proceedings of the National Academy of Sciences, Vol. 108, Issue 19
Species abundance distribution results from a spatial analogy of central limit theorem
journal, April 2009
- Sizling, A. L.; Storch, D.; Sizlingova, E.
- Proceedings of the National Academy of Sciences, Vol. 106, Issue 16
Microbial diversity in the deep sea and the underexplored "rare biosphere"
journal, July 2006
- Sogin, M. L.; Morrison, H. G.; Huber, J. A.
- Proceedings of the National Academy of Sciences, Vol. 103, Issue 32
Conditionally Rare Taxa Disproportionately Contribute to Temporal Changes in Microbial Diversity
journal, July 2014
- Shade, A.; Jones, S. E.; Caporaso, J. G.
- mBio, Vol. 5, Issue 4
Ecology and exploration of the rare biosphere
journal, March 2015
- Lynch, Michael D. J.; Neufeld, Josh D.
- Nature Reviews Microbiology, Vol. 13, Issue 4
Linking biodiversity patterns by autocorrelated random sampling
journal, March 2011
- McGill, Brian J.
- American Journal of Botany, Vol. 98, Issue 3
Where less may be more: how the rare biosphere pulls ecosystems strings
journal, January 2017
- Jousset, Alexandre; Bienhold, Christina; Chatzinotas, Antonis
- The ISME Journal, Vol. 11, Issue 4
The 'rare biosphere': a reality check
journal, September 2009
- Reeder, Jens; Knight, Rob
- Nature Methods, Vol. 6, Issue 9
Ironing out the wrinkles in the rare biosphere through improved OTU clustering: Ironing out the wrinkles in the rare biosphere
journal, March 2010
- Huse, Susan M.; Welch, David Mark; Morrison, Hilary G.
- Environmental Microbiology, Vol. 12, Issue 7
Removing Noise From Pyrosequenced Amplicons
journal, January 2011
- Quince, Christopher; Lanzen, Anders; Davenport, Russell J.
- BMC Bioinformatics, Vol. 12, Issue 1
Multivariate Cutoff Level Analysis (MultiCoLA) of large community data sets
journal, June 2010
- Gobet, Angélique; Quince, Christopher; Ramette, Alban
- Nucleic Acids Research, Vol. 38, Issue 15
Reducing the Effects of PCR Amplification and Sequencing Artifacts on 16S rRNA-Based Studies
journal, December 2011
- Schloss, Patrick D.; Gevers, Dirk; Westcott, Sarah L.
- PLoS ONE, Vol. 6, Issue 12
Rarity in large data sets: Singletons, modal values and the location of the species abundance distribution
journal, June 2012
- Straatsma, Gerben; Egli, Simon
- Basic and Applied Ecology, Vol. 13, Issue 4
Rare species in communities of tropical insect herbivores: pondering the mystery of singletons
journal, June 2000
- Novotný, Vojtech; Basset, Yves
- Oikos, Vol. 89, Issue 3
How species richness and total abundance constrain the distribution of abundance
journal, July 2013
- Locey, Kenneth J.; White, Ethan P.
- Ecology Letters, Vol. 16, Issue 9
Toward a Metabolic Theory of Ecology
journal, July 2004
- Brown, James H.; Gillooly, James F.; Allen, Andrew P.
- Ecology, Vol. 85, Issue 7
Shifts in metabolic scaling, production, and efficiency across major evolutionary transitions of life
journal, June 2010
- DeLong, J. P.; Okie, J. G.; Moses, M. E.
- Proceedings of the National Academy of Sciences, Vol. 107, Issue 29
Temperature mediates continental-scale diversity of microbes in forest soils
journal, July 2016
- Zhou, Jizhong; Deng, Ye; Shen, Lina
- Nature Communications, Vol. 7, Issue 1
Mean mass-specific metabolic rates are strikingly similar across life's major domains: Evidence for life's metabolic optimum
journal, October 2008
- Makarieva, A. M.; Gorshkov, V. G.; Li, B. -L.
- Proceedings of the National Academy of Sciences, Vol. 105, Issue 44
Characteristic Sizes of Life in the Oceans, from Bacteria to Whales
journal, January 2016
- Andersen, K. H.; Berge, T.; Gonçalves, R. J.
- Annual Review of Marine Science, Vol. 8, Issue 1
Incorporating 16S Gene Copy Number Information Improves Estimates of Microbial Diversity and Abundance
journal, October 2012
- Kembel, Steven W.; Wu, Martin; Eisen, Jonathan A.
- PLoS Computational Biology, Vol. 8, Issue 10
Correcting for 16S rRNA gene copy numbers in microbiome surveys remains an unsolved problem
journal, February 2018
- Louca, Stilianos; Doebeli, Michael; Parfrey, Laura Wegener
- Microbiome, Vol. 6, Issue 1
Evaluation of the reproducibility of amplicon sequencing with Illumina MiSeq platform
journal, April 2017
- Wen, Chongqing; Wu, Liyou; Qin, Yujia
- PLOS ONE, Vol. 12, Issue 4
High-Throughput Metagenomic Technologies for Complex Microbial Community Analysis: Open and Closed Formats
journal, January 2015
- Zhou, Jizhong; He, Zhili; Yang, Yunfeng
- mBio, Vol. 6, Issue 1
Average genome size estimation improves comparative metagenomics and sheds light on the functional ecology of the human microbiome
journal, March 2015
- Nayfach, Stephen; Pollard, Katherine S.
- Genome Biology, Vol. 16, Issue 1
EMIRGE: reconstruction of full-length ribosomal genes from microbial community short read sequencing data
journal, May 2011
- Miller, Christopher S.; Baker, Brett J.; Thomas, Brian C.
- Genome Biology, Vol. 12, Issue 5
Accurate read-based metagenome characterization using a hierarchical suite of unique signatures
journal, March 2015
- Freitas, Tracey Allen K.; Li, Po-E; Scholz, Matthew B.
- Nucleic Acids Research, Vol. 43, Issue 10
Shotgun metagenomics, from sampling to analysis
journal, September 2017
- Quince, Christopher; Walker, Alan W.; Simpson, Jared T.
- Nature Biotechnology, Vol. 35, Issue 9
FunGene: the functional gene pipeline and repository
journal, January 2013
- Fish, Jordan A.; Chai, Benli; Wang, Qiong
- Frontiers in Microbiology, Vol. 4
Comparison of 16S rRNA and protein-coding genes as molecular markers for assessing microbial diversity (Bacteria and Archaea) in ecosystems
journal, September 2011
- Roux, Simon; Enault, François; Bronner, Gisè
- FEMS Microbiology Ecology, Vol. 78, Issue 3
Tilting at Windmills: a Response to a Recent Critique of Terminal Restriction Fragment Length Polymorphism Data
journal, December 2007
- Fierer, N.; Blackwood, C. B.; Zak, D. R.
- Applied and Environmental Microbiology, Vol. 73, Issue 24
Past and future species definitions for Bacteria and Archaea
journal, June 2015
- Rosselló-Móra, Ramon; Amann, Rudolf
- Systematic and Applied Microbiology, Vol. 38, Issue 4
Uncultivated microbes in need of their own taxonomy
journal, July 2017
- Konstantinidis, Konstantinos T.; Rosselló-Móra, Ramon; Amann, Rudolf
- The ISME Journal, Vol. 11, Issue 11
A Comprehensive Evaluation of PCR Primers to Amplify the nifH Gene of Nitrogenase
journal, July 2012
- Gaby, John Christian; Buckley, Daniel H.
- PLoS ONE, Vol. 7, Issue 7
Subsampled open-reference clustering creates consistent, comprehensive OTU definitions and scales to billions of sequences
journal, January 2014
- Rideout, Jai Ram; He, Yan; Navas-Molina, Jose A.
- PeerJ, Vol. 2
UPARSE: highly accurate OTU sequences from microbial amplicon reads
journal, August 2013
- Edgar, Robert C.
- Nature Methods, Vol. 10, Issue 10
The Concept of Taxon Invariance in Ecology: Do Diversity Patterns Vary with Changes in Taxonomic Resolution?
journal, September 2008
- Storch, David; Šizling, Arnošt L.
- Folia Geobotanica, Vol. 43, Issue 3
Phylogenetic scale in ecology and evolution
journal, January 2018
- Graham, Catherine H.; Storch, David; Machac, Antonin
- Global Ecology and Biogeography, Vol. 27, Issue 2
Long-Term Experimental Evolution in Escherichia coli. I. Adaptation and Divergence During 2,000 Generations
journal, December 1991
- Lenski, Richard E.; Rose, Michael R.; Simpson, Suzanne C.
- The American Naturalist, Vol. 138, Issue 6
Flowers as Islands: Spatial Distribution of Nectar-Inhabiting Microfungi among Plants of Mimulus aurantiacus, a Hummingbird-Pollinated Shrub
journal, November 2011
- Belisle, Melinda; Peay, Kabir G.; Fukami, Tadashi
- Microbial Ecology, Vol. 63, Issue 4
Dispersal timing determines the importance of priority effects in bacterial communities
journal, October 2017
- Svoboda, Pavel; Lindström, Eva S.; Ahmed Osman, Omneya
- The ISME Journal, Vol. 12, Issue 2
Big questions, small worlds: microbial model systems in ecology
journal, April 2004
- Jessup, Christine M.; Kassen, Rees; Forde, Samantha E.
- Trends in Ecology & Evolution, Vol. 19, Issue 4
Method in macroecology
journal, November 2004
- Blackburn, Tim M.
- Basic and Applied Ecology, Vol. 5, Issue 5
Phylogenetic relatedness predicts priority effects in nectar yeast communities
journal, July 2011
- Peay, Kabir G.; Belisle, Melinda; Fukami, Tadashi
- Proceedings of the Royal Society B: Biological Sciences, Vol. 279, Issue 1729
Experimental demonstration of the importance of competition under disturbance
journal, July 2010
- Violle, C.; Pu, Z.; Jiang, L.
- Proceedings of the National Academy of Sciences, Vol. 107, Issue 29
Diversity peaks at intermediate productivity in a laboratory microcosm
journal, August 2000
- Kassen, Rees; Buckling, Angus; Bell, Graham
- Nature, Vol. 406, Issue 6795
Challenges in microbial ecology: building predictive understanding of community function and dynamics
journal, March 2016
- Widder, Stefanie; Allen, Rosalind J.; Pfeiffer, Thomas
- The ISME Journal, Vol. 10, Issue 11
Marine and terrestrial ecology: unifying concepts, revealing differences
journal, October 2012
- Webb, Thomas J.
- Trends in Ecology & Evolution, Vol. 27, Issue 10
Species abundance distributions: moving beyond single prediction theories to integration within an ecological framework
journal, October 2007
- McGill, Brian J.; Etienne, Rampal S.; Gray, John S.
- Ecology Letters, Vol. 10, Issue 10
Works referencing / citing this record:
Dormancy dampens the microbial distance–decay relationship
journal, March 2020
- Locey, K. J.; Muscarella, M. E.; Larsen, M. L.
- Philosophical Transactions of the Royal Society B: Biological Sciences, Vol. 375, Issue 1798
Microbes and macro-invertebrates show parallel β-diversity but contrasting α-diversity patterns in a marine natural experiment
journal, October 2019
- Rapacciuolo, Giovanni; Beman, J. Michael; Schiebelhut, Lauren M.
- Proceedings of the Royal Society B: Biological Sciences, Vol. 286, Issue 1912
Global distribution of earthworm diversity
journal, October 2019
- Phillips, Helen R. P.; Guerra, Carlos A.; Bartz, Marie L. C.
- Science, Vol. 366, Issue 6464
Community Assembly Mechanisms Underlying the Core and Random Bacterioplankton and Microeukaryotes in a River–Reservoir System
journal, May 2019
- Isabwe, Alain; Ren, Kexin; Wang, Yongming
- Water, Vol. 11, Issue 6
Local Adaptation of Bacterial Symbionts within a Geographic Mosaic of Antibiotic Coevolution
journal, November 2019
- Caldera, Eric J.; Chevrette, Marc G.; McDonald, Bradon R.
- Applied and Environmental Microbiology, Vol. 85, Issue 24
Decrypting the phyllosphere microbiota: progress and challenges
journal, February 2019
- Laforest‐Lapointe, Isabelle; Whitaker, Briana K.
- American Journal of Botany
Describing macroecological patterns in microbes: Approaches for comparative analyses of operational taxonomic unit read number distribution with a case study of global oceanic bacteria
journal, February 2020
- Nakadai, Ryosuke; Okazaki, Yusuke; Matsuoka, Shunsuke
- Environmental DNA, Vol. 2, Issue 4
Assembly and seasonality of core phyllosphere microbiota on perennial biofuel crops
journal, September 2019
- Grady, Keara L.; Sorensen, Jackson W.; Stopnisek, Nejc
- Nature Communications, Vol. 10, Issue 1
Phylogenetic and metabolic diversity have contrasting effects on the ecological functioning of bacterial communities
journal, February 2021
- Xenophontos, Constantinos; Taubert, Martin; Harpole, W. Stanley
- FEMS Microbiology Ecology, Vol. 97, Issue 3
Phylogenetic and metabolic diversity have contrasting effects on the ecological functioning of bacterial communities
journal, February 2021
- Xenophontos, Constantinos; Taubert, Martin; Harpole, W. Stanley
- FEMS Microbiology Ecology, Vol. 97, Issue 3
Methods and approaches to advance soil macroecology
journal, August 2020
- White, Hannah J.; León‐Sánchez, Lupe; Burton, Victoria J.
- Global Ecology and Biogeography, Vol. 29, Issue 10
Host-associated microbiomes are predicted by immune system complexity and climate
journal, February 2020
- Woodhams, Douglas C.; Bletz, Molly C.; Becker, C. Guilherme
- Genome Biology, Vol. 21, Issue 1