What Limits Predictive Certainty of Long-Term Carbon Uptake?
Abstract
Terrestrial biosphere models can help identify physical processes that control carbon dynamics, including land-atmosphere CO2 fluxes, and have the potential to project the terrestrial ecosystem response to changing climate. It is important to identify ecosystem processes most responsible for model predictive uncertainty and design improved model representation and observational system studies to reduce that uncertainty. Here we identified model parameters that contribute the most uncertainty to long-term (~100 years) projections of net ecosystem exchange, net primary production, and aboveground biomass within a mechanistic terrestrial biosphere model (Ecosystem Demography, version 2.1) ED2. An uncertainty analysis identified parameters that represent the quantum efficiency of light to photosynthetic conversion, leaf respiration and soil-plant water transfer as the highest contributors to model uncertainty regardless of time frame (annual, decadal, and centennial) and output (e.g., net ecosystem exchange, net primary production, aboveground biomass). Contrary to expectations, the contribution of successional processes related to reproduction, competition, and mortality did not increase as the time scale increased. These findings suggest that uncertainty in the parameters governing short-term ecosystem processes remains the most significant bottleneck to reducing predictive uncertainty. Key actions to reduce parameter uncertainty include more leaf-level trait measurements across multiple sites for quantum efficiency and leafmore »
- Authors:
-
- Pennsylvania State Univ., University Park, PA (United States). Dept. of Meteorology and Atmospheric Science; Univ. of Utah, Salt Lake City, UT (United States)
- Boston Univ., Boston, MA (United States). Dept. of Earth and Environment
- Brookhaven National Lab. (BNL), Upton, NY (United States). Environmental and Climate Sciences Dept.
- Pennsylvania State Univ., University Park, PA (United States). Dept. of Meteorology and Atmospheric Science
- Publication Date:
- Research Org.:
- Brookhaven National Laboratory (BNL), Upton, NY (United States)
- Sponsoring Org.:
- USDOE Office of Science (SC), Biological and Environmental Research (BER)
- OSTI Identifier:
- 1482088
- Alternate Identifier(s):
- OSTI ID: 1488674
- Report Number(s):
- BNL-209437-2018-JAAM
Journal ID: ISSN 2169-8953
- Grant/Contract Number:
- SC0012704
- Resource Type:
- Accepted Manuscript
- Journal Name:
- Journal of Geophysical Research. Biogeosciences
- Additional Journal Information:
- Journal Volume: 123; Journal Issue: 12; Journal ID: ISSN 2169-8953
- Publisher:
- American Geophysical Union
- Country of Publication:
- United States
- Language:
- English
- Subject:
- 54 ENVIRONMENTAL SCIENCES
Citation Formats
Raczka, Brett, Dietze, Michael C., Serbin, Shawn P., and Davis, Kenneth J. What Limits Predictive Certainty of Long-Term Carbon Uptake?. United States: N. p., 2018.
Web. doi:10.1029/2018JG004504.
Raczka, Brett, Dietze, Michael C., Serbin, Shawn P., & Davis, Kenneth J. What Limits Predictive Certainty of Long-Term Carbon Uptake?. United States. https://doi.org/10.1029/2018JG004504
Raczka, Brett, Dietze, Michael C., Serbin, Shawn P., and Davis, Kenneth J. Sat .
"What Limits Predictive Certainty of Long-Term Carbon Uptake?". United States. https://doi.org/10.1029/2018JG004504. https://www.osti.gov/servlets/purl/1482088.
@article{osti_1482088,
title = {What Limits Predictive Certainty of Long-Term Carbon Uptake?},
author = {Raczka, Brett and Dietze, Michael C. and Serbin, Shawn P. and Davis, Kenneth J.},
abstractNote = {Terrestrial biosphere models can help identify physical processes that control carbon dynamics, including land-atmosphere CO2 fluxes, and have the potential to project the terrestrial ecosystem response to changing climate. It is important to identify ecosystem processes most responsible for model predictive uncertainty and design improved model representation and observational system studies to reduce that uncertainty. Here we identified model parameters that contribute the most uncertainty to long-term (~100 years) projections of net ecosystem exchange, net primary production, and aboveground biomass within a mechanistic terrestrial biosphere model (Ecosystem Demography, version 2.1) ED2. An uncertainty analysis identified parameters that represent the quantum efficiency of light to photosynthetic conversion, leaf respiration and soil-plant water transfer as the highest contributors to model uncertainty regardless of time frame (annual, decadal, and centennial) and output (e.g., net ecosystem exchange, net primary production, aboveground biomass). Contrary to expectations, the contribution of successional processes related to reproduction, competition, and mortality did not increase as the time scale increased. These findings suggest that uncertainty in the parameters governing short-term ecosystem processes remains the most significant bottleneck to reducing predictive uncertainty. Key actions to reduce parameter uncertainty include more leaf-level trait measurements across multiple sites for quantum efficiency and leaf respiration rate. Further, the empirical representation of soil-plant water transfer should be replaced with a mechanistic, hydraulic representation of water flow, which can be constrained with direct measurements. This analysis focused on aboveground ecosystem processes. The impact of belowground carbon cycling, initial conditions, and meteorological forcing should be addressed in future studies.},
doi = {10.1029/2018JG004504},
journal = {Journal of Geophysical Research. Biogeosciences},
number = 12,
volume = 123,
place = {United States},
year = {Sat Dec 01 00:00:00 EST 2018},
month = {Sat Dec 01 00:00:00 EST 2018}
}
Web of Science
Works referenced in this record:
Tree mortality in the eastern and central United States: patterns and drivers
journal, July 2011
- Dietze, Michael C.; Moorcroft, Paul R.
- Global Change Biology, Vol. 17, Issue 11
Products, requirements and efficiency of biosynthesis a quantitative approach
journal, June 1974
- De Vries, F. W. T. Penning; Brunsting, A. H. M.; Van Laar, H. H.
- Journal of Theoretical Biology, Vol. 45, Issue 2
Sensitivity Anaysis as an Ingredient of Modeling
journal, November 2000
- Campolongo, F.; Tarantola, S.; Saltelli, A.
- Statistical Science, Vol. 15, Issue 4
Pathogens and insect herbivores drive rainforest plant diversity and composition
journal, January 2014
- Bagchi, Robert; Gallery, Rachel E.; Gripenberg, Sofia
- Nature, Vol. 506, Issue 7486
Toward a physically plausible upper bound of sea-level rise projections
journal, October 2012
- Sriver, Ryan L.; Urban, Nathan M.; Olson, Roman
- Climatic Change, Vol. 115, Issue 3-4
Inference from Iterative Simulation Using Multiple Sequences
journal, November 1992
- Gelman, Andrew; Rubin, Donald B.
- Statistical Science, Vol. 7, Issue 4
Regenerating temperate forests under elevated CO2 and nitrogen deposition: comparing biochemical and stomatal limitation of photosynthesis
journal, November 2001
- Bauer, G. A.; Berntson, G. M.; Bazzaz, F. A.
- New Phytologist, Vol. 152, Issue 2
Diversity in plant hydraulic traits explains seasonal and inter-annual variations of vegetation dynamics in seasonally dry tropical forests
journal, May 2016
- Xu, Xiangtao; Medvigy, David; Powers, Jennifer S.
- New Phytologist, Vol. 212, Issue 1
Computer and remote‐sensing infrastructure to enhance large‐scale testing of individual‐based forest models
journal, November 2015
- Shugart, Herman H.; Asner, Gregory P.; Fischer, Rico
- Frontiers in Ecology and the Environment, Vol. 13, Issue 9
A quantitative assessment of a terrestrial biosphere model's data needs across North American biomes: PEcAn/ED model-data uncertainty analysis
journal, March 2014
- Dietze, Michael C.; Serbin, Shawn P.; Davidson, Carl
- Journal of Geophysical Research: Biogeosciences, Vol. 119, Issue 3
Relative information contributions of model vs. data to short- and long-term forecasts of forest carbon dynamics
journal, July 2011
- Weng, Ensheng; Luo, Yiqi
- Ecological Applications, Vol. 21, Issue 5
Biometric and eddy-covariance based estimates of annual carbon storage in five eastern North American deciduous forests
journal, December 2002
- Curtis, Peter S.; Hanson, Paul J.; Bolstad, Paul
- Agricultural and Forest Meteorology, Vol. 113, Issue 1-4
Sensitivity analysis of a process-based ecosystem model: Pinpointing parameterization and structural issues: GLOBAL SENSITIVITY ANALYSIS OF LPJ-GUESS
journal, April 2013
- Pappas, Christoforos; Fatichi, Simone; Leuzinger, Sebastian
- Journal of Geophysical Research: Biogeosciences, Vol. 118, Issue 2
The full path of Janzen-Connell effects: genetic tracking of seeds to adult plant recruitment: NEWS AND VIEWS: PERSPECTIVE
journal, September 2011
- Schupp, Eugene W.; Jordano, Pedro
- Molecular Ecology, Vol. 20, Issue 19
Evaluation of continental carbon cycle simulations with North American flux tower observations
journal, November 2013
- Raczka, Brett M.; Davis, Kenneth J.; Huntzinger, Deborah
- Ecological Monographs, Vol. 83, Issue 4
Partitioning solar radiation into direct and diffuse, visible and near-infrared components
journal, April 1985
- Weiss, A.; Norman, J. M.
- Agricultural and Forest Meteorology, Vol. 34, Issue 2-3
Evidence from Individual Inference for High-Dimensional Coexistence: Long-Term Experiments on Recruitment Response
journal, February 2012
- Clark, James S.; Soltoff, Benjamin D.; Powell, Amanda S.
- PLoS ONE, Vol. 7, Issue 2
Atmospheric carbon dioxide at Mauna Loa Observatory: 2. Analysis of the NOAA GMCC data, 1974-1985
journal, June 1989
- Thoning, Kirk W.; Tans, Pieter P.; Komhyr, Walter D.
- Journal of Geophysical Research: Atmospheres, Vol. 94, Issue D6
Dynamics in Late-Successional Hemlock–Hardwood Forests over Three Decades
journal, January 2000
- Woods, Kerry D.
- Ecology, Vol. 81, Issue 1
Causes of interannual variability in ecosystem–atmosphere CO2 exchange in a northern Wisconsin forest using a Bayesian model calibration
journal, February 2008
- Ricciuto, Daniel M.; Butler, Martha P.; Davis, Kenneth J.
- Agricultural and Forest Meteorology, Vol. 148, Issue 2
Soil carbon fluxes and stocks in a Great Lakes forest chronosequence
journal, January 2009
- Tang, Jianwu; Bolstad, Paul V.; Martin, Jonathan G.
- Global Change Biology, Vol. 15, Issue 1
Coupled Atmosphere–Biophysics–Hydrology Models for Environmental Modeling
journal, June 2000
- Walko, Robert L.; Band, Larry E.; Baron, Jill
- Journal of Applied Meteorology, Vol. 39, Issue 6
Comparing net ecosystem exchange of carbon dioxide between an old-growth and mature forest in the upper Midwest, USA
journal, January 2005
- Desai, Ankur R.; Bolstad, Paul V.; Cook, Bruce D.
- Agricultural and Forest Meteorology, Vol. 128, Issue 1-2
A model-data intercomparison of CO 2 exchange across North America: Results from the North American Carbon Program site synthesis
journal, January 2010
- Schwalm, Christopher R.; Williams, Christopher A.; Schaefer, Kevin
- Journal of Geophysical Research, Vol. 115
Terrestrial biosphere model performance for inter-annual variability of land-atmosphere CO2 exchange
journal, March 2012
- Keenan, T. F.; Baker, Ian; Barr, Alan
- Global Change Biology, Vol. 18, Issue 6
Linking big models to big data: efficient ecosystem model calibration through Bayesian model emulation
journal, January 2018
- Fer, Istem; Kelly, Ryan; Moorcroft, Paul R.
- Biogeosciences, Vol. 15, Issue 19
Variation in measured values of photosynthetic quantum yield in ecophysiological studies
journal, June 2001
- Singsaas, Eric L.; Ort, Donald R.; DeLucia, Evan H.
- Oecologia, Vol. 128, Issue 1
Relative growth rate in relation to physiological and morphological traits for northern hardwood tree seedlings: species, light environment and ontogenetic considerations
journal, November 1993
- Walters, M. B.; Kruger, E. L.; Reich, P. B.
- Oecologia, Vol. 96, Issue 2
Aboveground production efficiency and canopy nutrient contents of mixed-hardwood forest communities along a moisture gradient in the central United States
journal, December 1996
- Jose, Shibu; Gillespie, Andrew R.
- Canadian Journal of Forest Research, Vol. 26, Issue 12
Translating Probability Density Functions: From R to BUGS and Back Again
journal, January 2013
- LeBauer, David,S.; Dietze, Michael,C.; Bolker, Benjamin,M.
- The R Journal, Vol. 5, Issue 1
What plant hydraulics can tell us about responses to climate-change droughts
journal, March 2015
- Sperry, John S.; Love, David M.
- New Phytologist, Vol. 207, Issue 1
Attributing uncertainties in simulated biospheric carbon fluxes to different error sources: ANALYZING ERRORS IN BIOSPHERIC C MODELS
journal, June 2011
- Lin, J. C.; Pejam, M. R.; Chan, E.
- Global Biogeochemical Cycles, Vol. 25, Issue 2
A Model Predicting Stomatal Conductance and its Contribution to the Control of Photosynthesis under Different Environmental Conditions
book, January 1987
- Ball, J. Timothy; Woodrow, Ian E.; Berry, Joseph A.
- Progress in Photosynthesis Research
Measuring the impact of COVID-19 vaccine misinformation on vaccination intent in the UK and USA
journal, February 2021
- Loomba, Sahil; de Figueiredo, Alexandre; Piatek, Simon J.
- Nature Human Behaviour, Vol. 5, Issue 3
Constraints on radiative forcing and future climate change from observations and climate model ensembles
journal, April 2002
- Knutti, Reto; Stocker, Thomas F.; Joos, Fortunat
- Nature, Vol. 416, Issue 6882
Broadscale variability in tree data of the historical Public Land Survey and its consequences for ecological studies
journal, May 2011
- Liu, Feng; Mladenoff, David J.; Keuler, Nicholas S.
- Ecological Monographs, Vol. 81, Issue 2
Observing terrestrial ecosystems and the carbon cycle from space
journal, February 2015
- Schimel, David; Pavlick, Ryan; Fisher, Joshua B.
- Global Change Biology, Vol. 21, Issue 5
Vegetation demographics in Earth System Models: A review of progress and priorities
journal, October 2017
- Fisher, Rosie A.; Koven, Charles D.; Anderegg, William R. L.
- Global Change Biology, Vol. 24, Issue 1
A critical appraisal of a combined stomatal-photosynthesis model for C3 plants
journal, April 1995
- Leuning, R.
- Plant, Cell and Environment, Vol. 18, Issue 4
A roadmap for improving the representation of photosynthesis in Earth system models
journal, November 2016
- Rogers, Alistair; Medlyn, Belinda E.; Dukes, Jeffrey S.
- New Phytologist, Vol. 213, Issue 1
Global Carbon Budget 2017
journal, January 2018
- Le Quéré, Corinne; Andrew, Robbie M.; Friedlingstein, Pierre
- Earth System Science Data, Vol. 10, Issue 1
Details That Matter: The Spatial Distribution of Individual Trees Maintains Forest Ecosystem Function
journal, December 1995
- Pacala, Stephen W.; Deutschman, Douglas H.
- Oikos, Vol. 74, Issue 3
Global Carbon Budget 2017
text, January 2018
- Le Quéré, C.; Andrew, R. M.; Friedlingstein, P.
- Karlsruhe
Linear Analysis of soil Decomposition: Insights from the Century Model
journal, May 1998
- Bolker, Benjamin M.; Pacala, Stephen W.; Parton, William J.
- Ecological Applications, Vol. 8, Issue 2
Global convergence in the vulnerability of forests to drought
journal, November 2012
- Choat, Brendan; Jansen, Steven; Brodribb, Tim J.
- Nature, Vol. 491, Issue 7426
Using Light-Use and Production Efficiency Models to Predict Photosynthesis and Net Carbon Exchange During Forest Canopy Disturbance
journal, November 2007
- Cook, Bruce D.; Bolstad, Paul V.; Martin, Jonathan G.
- Ecosystems, Vol. 11, Issue 1
Uncertainties in CMIP5 Climate Projections due to Carbon Cycle Feedbacks
journal, January 2014
- Friedlingstein, Pierre; Meinshausen, Malte; Arora, Vivek K.
- Journal of Climate, Vol. 27, Issue 2
The correlations and sequence of plant stomatal, hydraulic, and wilting responses to drought
journal, November 2016
- Bartlett, Megan K.; Klein, Tamir; Jansen, Steven
- Proceedings of the National Academy of Sciences, Vol. 113, Issue 46
Does the leaf economic spectrum hold within plant functional types? A Bayesian multivariate trait meta‐analysis
journal, January 2020
- Shiklomanov, Alexey N.; Cowdery, Elizabeth M.; Bahn, Michael
- Ecological Applications, Vol. 30, Issue 3
Constraints on radiative forcing and future climate change from observations and climate model ensembles
text, January 2002
- Knutti, Reto; Stocker, Thomas; Joos, Fortunat
- Macmillan Journals Ltd.
On improving the communication between models and data: Communication between models and data
journal, January 2013
- Dietze, Michael C.; Lebauer, David S.; Kooper, Rob
- Plant, Cell & Environment, Vol. 36, Issue 9
Carbon–Concentration and Carbon–Climate Feedbacks in CMIP5 Earth System Models
journal, August 2013
- Arora, Vivek K.; Boer, George J.; Friedlingstein, Pierre
- Journal of Climate, Vol. 26, Issue 15
Predicting ecosystem dynamics at regional scales: an evaluation of a terrestrial biosphere model for the forests of northeastern North America
journal, January 2012
- Medvigy, David; Moorcroft, Paul R.
- Philosophical Transactions of the Royal Society B: Biological Sciences, Vol. 367, Issue 1586
Predicting yields of short-rotation hybrid poplar ( Populus spp.) for the United States through model–data synthesis
journal, June 2013
- Wang, Dan; LeBauer, David; Dietze, Michael
- Ecological Applications, Vol. 23, Issue 4
A general ecophysiological framework for modelling the impact of pests and pathogens on forest ecosystems.
journal, August 2014
- Dietze, Michael C.; Matthes, Jaclyn Hatala
- Ecology Letters, Vol. 17, Issue 11
Mathematical and Computational Challenges in Population Biology and Ecosystems Science
journal, January 1997
- Levin, S. A.; Grenfell, B.; Hastings, A.
- Science, Vol. 275, Issue 5298
A global prognostic scheme of leaf onset using satellite data
journal, October 2000
- Botta, A.; Viovy, N.; Ciais, P.
- Global Change Biology, Vol. 6, Issue 7
An efficient method for global parameter sensitivity analysis and its applications to the Australian community land surface model (CABLE)
journal, December 2013
- Lu, Xingjie; Wang, Ying-Ping; Ziehn, Tilo
- Agricultural and Forest Meteorology, Vol. 182-183
Dimensionality Reduction for Complex Models via Bayesian Compressive Sensing
journal, January 2014
- Sargsyan, Khachik; Safta, Cosmin; Najm, Habib N.
- International Journal for Uncertainty Quantification, Vol. 4, Issue 1
Nonstructural Carbon in Woody Plants
journal, April 2014
- Dietze, Michael C.; Sala, Anna; Carbone, Mariah S.
- Annual Review of Plant Biology, Vol. 65, Issue 1
A Method for Scaling Vegetation Dynamics: the Ecosystem Demography Model (ed)
journal, November 2001
- Moorcroft, P. R.; Hurtt, G. C.; Pacala, S. W.
- Ecological Monographs, Vol. 71, Issue 4
Herbivores and the Number of Tree Species in Tropical Forests
journal, November 1970
- Janzen, Daniel H.
- The American Naturalist, Vol. 104, Issue 940
Facilitating feedbacks between field measurements and ecosystem models
journal, May 2013
- LeBauer, David S.; Wang, Dan; Richter, Katherine T.
- Ecological Monographs, Vol. 83, Issue 2
Climate, soil organic layer, and nitrogen jointly drive forest development after fire in the North American boreal zone: CLIMATE AND SOIL DRIVE BOREAL CARBON
journal, August 2016
- Trugman, A. T.; Fenton, N. J.; Bergeron, Y.
- Journal of Advances in Modeling Earth Systems, Vol. 8, Issue 3
Estimating parameters of a forest ecosystem C model with measurements of stocks and fluxes as joint constraints
journal, April 2010
- Richardson, Andrew D.; Williams, Mathew; Hollinger, David Y.
- Oecologia, Vol. 164, Issue 1
Estimating diurnal to annual ecosystem parameters by synthesis of a carbon flux model with eddy covariance net ecosystem exchange observations
journal, February 2005
- Braswell, Bobby H.; Sacks, William J.; Linder, Ernst
- Global Change Biology, Vol. 11, Issue 2
Prediction in ecology: a first-principles framework
journal, August 2017
- Dietze, Michael C.
- Ecological Applications, Vol. 27, Issue 7
A biochemical model of photosynthetic CO2 assimilation in leaves of C3 species
journal, June 1980
- Farquhar, G. D.; von Caemmerer, S.; Berry, J. A.
- Planta, Vol. 149, Issue 1
Mechanistic scaling of ecosystem function and dynamics in space and time: Ecosystem Demography model version 2
journal, January 2009
- Medvigy, D.; Wofsy, S. C.; Munger, J. W.
- Journal of Geophysical Research, Vol. 114, Issue G1
A Method for Scaling Vegetation Dynamics: The Ecosystem Demography Model (ED)
journal, November 2001
- Moorcroft, P. R.; Hurtt, G. C.; Pacala, S. W.
- Ecological Monographs, Vol. 71, Issue 4
The Impact of Parametric Uncertainties on Biogeochemistry in the E3SM Land Model
journal, February 2018
- Ricciuto, Daniel; Sargsyan, Khachik; Thornton, Peter
- Journal of Advances in Modeling Earth Systems, Vol. 10, Issue 2
Carbon exchange and venting anomalies in an upland deciduous forest in northern Wisconsin, USA
journal, November 2004
- Cook, Bruce D.; Davis, Kenneth J.; Wang, Weiguo
- Agricultural and Forest Meteorology, Vol. 126, Issue 3-4
Dynamics of C, N, P and S in grassland soils: a model
journal, February 1988
- Parton, W. J.; Stewart, J. W. B.; Cole, C. V.
- Biogeochemistry, Vol. 5, Issue 1
Parameter and prediction uncertainty in an optimized terrestrial carbon cycle model: Effects of constraining variables and data record length
journal, January 2011
- Ricciuto, Daniel M.; King, Anthony W.; Dragoni, D.
- Journal of Geophysical Research, Vol. 116, Issue G1
Works referencing / citing this record:
Historical changes in the stomatal limitation of photosynthesis: empirical support for an optimality principle
journal, December 2019
- Lavergne, Aliénor; Voelker, Steve; Csank, Adam
- New Phytologist, Vol. 225, Issue 6
The biophysics, ecology, and biogeochemistry of functionally diverse, vertically and horizontally heterogeneous ecosystems: the Ecosystem Demography model, version 2.2 – Part 2: Model evaluation for tropical South America
journal, January 2019
- Longo, Marcos; Knox, Ryan G.; Levine, Naomi M.
- Geoscientific Model Development, Vol. 12, Issue 10
The biophysics, ecology, and biogeochemistry of functionally diverse, vertically and horizontally heterogeneous ecosystems: the Ecosystem Demography model, version 2.2 – Part 1: Model description
journal, January 2019
- Longo, Marcos; Knox, Ryan G.; Medvigy, David M.
- Geoscientific Model Development, Vol. 12, Issue 10