The microbial nitrogen cycling potential is impacted by polyaromatic hydrocarbon pollution of marine sediments
Abstract
During hydrocarbon exposure, the composition and functional dynamics of marine microbial communities are altered, favoring bacteria that can utilize this rich carbon source. Initial exposure of high levels of hydrocarbons in aerobic surface sediments can enrich growth of heterotrophic microorganisms having hydrocarbon degradation capacity. As a result, there can be a localized reduction in oxygen potential within the surface layer of marine sediments causing anaerobic zones. We hypothesized that increasing exposure to elevated hydrocarbon concentrations would positively correlate with an increase in denitrification processes and the net accumulation of dinitrogen. This hypothesis was tested by comparing the relative abundance of genes associated with nitrogen metabolism and nitrogen cycling identified in 6 metagenomes from sediments contaminated by polyaromatic hydrocarbons from the Deepwater Horizon (DWH) oil spill in the Gulf of Mexico, and 3 metagenomes from sediments associated with natural oil seeps in the Santa Barbara Channel. An additional 8 metagenomes from uncontaminated sediments from the Gulf of Mexico were analyzed for comparison. We predicted relative changes in metabolite turnover as a function of the differential microbial gene abundances, which showed predicted accumulation of metabolites associated with denitrification processes, including anammox, in the contaminated samples compared to uncontaminated sediments, with the magnitudemore »
- Authors:
-
- Argonne National Lab. (ANL), Lemont, IL (United States); Univ. of Chicago, Chicago, IL (United States)
- Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Washington State Univ., Pullman, WA (United States)
- Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States)
- Florida State Univ., Tallahassee, FL (United States)
- Publication Date:
- Research Org.:
- Argonne National Laboratory (ANL), Argonne, IL (United States)
- Sponsoring Org.:
- USDOE Office of Science (SC); Argonne National Laboratory
- OSTI Identifier:
- 1392671
- Grant/Contract Number:
- AC02-06CH11357
- Resource Type:
- Accepted Manuscript
- Journal Name:
- Frontiers in Microbiology
- Additional Journal Information:
- Journal Volume: 5; Journal Issue: 108; Journal ID: ISSN 1664-302X
- Publisher:
- Frontiers Research Foundation
- Country of Publication:
- United States
- Language:
- English
- Subject:
- 59 BASIC BIOLOGICAL SCIENCES; 54 ENVIRONMENTAL SCIENCES; nitrogen cycling; marine sediments; denitrification; microbial ecology; metagenomics; deepwater horizon oil spill; oil contamination; oil seeps
Citation Formats
Scott, Nicole M., Hess, Matthias, Bouskill, Nick J., Mason, Olivia U., Jansson, Janet K., and Gilbert, Jack A. The microbial nitrogen cycling potential is impacted by polyaromatic hydrocarbon pollution of marine sediments. United States: N. p., 2014.
Web. doi:10.3389/fmicb.2014.00108.
Scott, Nicole M., Hess, Matthias, Bouskill, Nick J., Mason, Olivia U., Jansson, Janet K., & Gilbert, Jack A. The microbial nitrogen cycling potential is impacted by polyaromatic hydrocarbon pollution of marine sediments. United States. https://doi.org/10.3389/fmicb.2014.00108
Scott, Nicole M., Hess, Matthias, Bouskill, Nick J., Mason, Olivia U., Jansson, Janet K., and Gilbert, Jack A. Tue .
"The microbial nitrogen cycling potential is impacted by polyaromatic hydrocarbon pollution of marine sediments". United States. https://doi.org/10.3389/fmicb.2014.00108. https://www.osti.gov/servlets/purl/1392671.
@article{osti_1392671,
title = {The microbial nitrogen cycling potential is impacted by polyaromatic hydrocarbon pollution of marine sediments},
author = {Scott, Nicole M. and Hess, Matthias and Bouskill, Nick J. and Mason, Olivia U. and Jansson, Janet K. and Gilbert, Jack A.},
abstractNote = {During hydrocarbon exposure, the composition and functional dynamics of marine microbial communities are altered, favoring bacteria that can utilize this rich carbon source. Initial exposure of high levels of hydrocarbons in aerobic surface sediments can enrich growth of heterotrophic microorganisms having hydrocarbon degradation capacity. As a result, there can be a localized reduction in oxygen potential within the surface layer of marine sediments causing anaerobic zones. We hypothesized that increasing exposure to elevated hydrocarbon concentrations would positively correlate with an increase in denitrification processes and the net accumulation of dinitrogen. This hypothesis was tested by comparing the relative abundance of genes associated with nitrogen metabolism and nitrogen cycling identified in 6 metagenomes from sediments contaminated by polyaromatic hydrocarbons from the Deepwater Horizon (DWH) oil spill in the Gulf of Mexico, and 3 metagenomes from sediments associated with natural oil seeps in the Santa Barbara Channel. An additional 8 metagenomes from uncontaminated sediments from the Gulf of Mexico were analyzed for comparison. We predicted relative changes in metabolite turnover as a function of the differential microbial gene abundances, which showed predicted accumulation of metabolites associated with denitrification processes, including anammox, in the contaminated samples compared to uncontaminated sediments, with the magnitude of this change being positively correlated to the hydrocarbon concentration and exposure duration. Furthermore, these data highlight the potential impact of hydrocarbon inputs on N cycling processes in marine sediments and provide information relevant for system scale models of nitrogen metabolism in affected ecosystems.},
doi = {10.3389/fmicb.2014.00108},
journal = {Frontiers in Microbiology},
number = 108,
volume = 5,
place = {United States},
year = {Tue Mar 25 00:00:00 EDT 2014},
month = {Tue Mar 25 00:00:00 EDT 2014}
}
Web of Science
Works referenced in this record:
Marine microorganisms make a meal of oil
journal, March 2006
- Head, Ian M.; Jones, D. Martin; Röling, Wilfred F. M.
- Nature Reviews Microbiology, Vol. 4, Issue 3
Metagenome, metatranscriptome and single-cell sequencing reveal microbial response to Deepwater Horizon oil spill
journal, June 2012
- Mason, Olivia U.; Hazen, Terry C.; Borglin, Sharon
- The ISME Journal, Vol. 6, Issue 9
Microbial community response to a simulated hydrocarbon spill in mangrove sediments
journal, February 2010
- Taketani, Rodrigo Gouvêa; Franco, Natália Oliveira; Rosado, Alexandre Soares
- The Journal of Microbiology, Vol. 48, Issue 1
Biodegradation of Diesel Fuel in Soil Under Various Nitrogen Addition Regimes
journal, September 2001
- Brook, Timothy R.; Stiver, Warren H.; Zytner, Richard G.
- Soil and Sediment Contamination: An International Journal, Vol. 10, Issue 5
Microbial Nitrogen Cycling Processes in Oxygen Minimum Zones
journal, January 2011
- Lam, Phyllis; Kuypers, Marcel M. M.
- Annual Review of Marine Science, Vol. 3, Issue 1
Deep-sea nutrient loss inferred from the marine dissolved N 2 /Ar ratio : DENITRIFICATION FROM GLOBAL N
journal, March 2013
- Hamme, Roberta C.; Emerson, Steven R.
- Geophysical Research Letters, Vol. 40, Issue 6
Potential roles of anaerobic ammonium and methane oxidation in the nitrogen cycle of wetland ecosystems
journal, February 2010
- Zhu, Guibing; Jetten, Mike S. M.; Kuschk, Peter
- Applied Microbiology and Biotechnology, Vol. 86, Issue 4
Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
journal, January 2009
- Langmead, Ben; Trapnell, Cole; Pop, Mihai
- Genome Biology, Vol. 10, Issue 3
GenBank
journal, November 2012
- Benson, Dennis A.; Cavanaugh, Mark; Clark, Karen
- Nucleic Acids Research, Vol. 41, Issue D1
Anaerobic ammonium oxidation (anammox) in the marine environment
journal, May 2005
- Dalsgaard, Tage; Thamdrup, Bo; Canfield, Donald E.
- Research in Microbiology, Vol. 156, Issue 4
Microbial gene functions enriched in the Deepwater Horizon deep-sea oil plume
journal, August 2011
- Lu, Zhenmei; Deng, Ye; Van Nostrand, Joy D.
- The ISME Journal, Vol. 6, Issue 2
The Evolution and Future of Earth’s Nitrogen Cycle
journal, October 2010
- Canfield, Donald E.; Glazer, Alexander N.; Falkowski, Paul G.
- Science, Vol. 330, Issue 6001
Predicted Relative Metabolomic Turnover (PRMT): determining metabolic turnover from a coastal marine metagenomic dataset
journal, June 2011
- Larsen, Peter E.; Collart, Frank R.; Field, Dawn
- Microbial Informatics and Experimentation, Vol. 1, Issue 1
The world's most spectacular marine hydrocarbon seeps (Coal Oil Point, Santa Barbara Channel, California): Quantification of emissions
journal, September 1999
- Hornafius, J. Scott; Quigley, Derek; Luyendyk, Bruce P.
- Journal of Geophysical Research: Oceans, Vol. 104, Issue C9
Subsurface Cycling of Nitrogen and Anaerobic Aromatic Hydrocarbon Biodegradation Revealed by Nucleic Acid and Metabolic Biomarkers
journal, March 2010
- Yagi, J. M.; Suflita, J. M.; Gieg, L. M.
- Applied and Environmental Microbiology, Vol. 76, Issue 10
Identification of Nitrogen-Incorporating Bacteria in Petroleum-Contaminated Arctic Soils by Using [ 15 N]DNA-Based Stable Isotope Probing and Pyrosequencing
journal, April 2011
- Bell, Terrence H.; Yergeau, Etienne; Martineau, Christine
- Applied and Environmental Microbiology, Vol. 77, Issue 12
Relating Phylogenetic and Functional Diversity among Denitrifiers and Quantifying their Capacity to Predict Community Functioning
journal, January 2012
- Salles, Joana Falcão; Le Roux, Xavier; Poly, Franck
- Frontiers in Microbiology, Vol. 3
KEGG: Kyoto Encyclopedia of Genes and Genomes
journal, January 1999
- Ogata, H.; Goto, S.; Sato, K.
- Nucleic Acids Research, Vol. 27, Issue 1
Nitrogen cycling in coastal marine ecosystems
journal, October 1999
- Herbert, R. A.
- FEMS Microbiology Reviews, Vol. 23, Issue 5
Anaerobic ammonium oxidation in deep-sea sediments off the Washington margin
journal, July 2009
- Engström, Pia; Penton, C. Ryan; Devola, Allan H.
- Limnology and Oceanography, Vol. 54, Issue 5
Composition and fate of gas and oil released to the water column during the Deepwater Horizon oil spill
journal, July 2011
- Reddy, C. M.; Arey, J. S.; Seewald, J. S.
- Proceedings of the National Academy of Sciences, Vol. 109, Issue 50
Natural seepage of crude oil into the marine environment
journal, December 2003
- Kvenvolden, K. A.; Cooper, C. K.
- Geo-Marine Letters, Vol. 23, Issue 3-4
Metagenomic analysis of microbial consortium from natural crude oil that seeps into the marine ecosystem offshore Southern California
journal, January 2014
- Hawley, Erik R.; Piao, Hailan; Scott, Nicole M.
- Standards in Genomic Sciences, Vol. 9, Issue 3
Microbial hydrocarbon degradation-bioremediation of oil spills
journal, January 1991
- Atlas, Ronald M.
- Journal of Chemical Technology & Biotechnology, Vol. 52, Issue 2
Anaerobic ammonium oxidation by nitrite (anammox): Implications for N2 production in coastal marine sediments
journal, April 2005
- Engström, Pia; Dalsgaard, Tage; Hulth, Stefan
- Geochimica et Cosmochimica Acta, Vol. 69, Issue 8
Structure of bacterial communities along a hydrocarbon contamination gradient in a coastal sediment: Bacterial communities along a hydrocarbon gradient
journal, November 2008
- Paissé, Sandrine; Coulon, Frédéric; Goñi-Urriza, Marisol
- FEMS Microbiology Ecology, Vol. 66, Issue 2
Hydrocarbon-degrading bacteria enriched by the Deepwater Horizon oil spill identified by cultivation and DNA-SIP
journal, June 2013
- Gutierrez, Tony; Singleton, David R.; Berry, David
- The ISME Journal, Vol. 7, Issue 11
Petroleum nitrogen compounds and oxygen compounds
journal, September 1970
- Snyder, Lloyd Robert
- Accounts of Chemical Research, Vol. 3, Issue 9
The metagenomics RAST server – a public resource for the automatic phylogenetic and functional analysis of metagenomes
journal, September 2008
- Meyer, F.; Paarmann, D.; D'Souza, M.
- BMC Bioinformatics, Vol. 9, Issue 1
Deep-sea bacteria enriched by oil and dispersant from the Deepwater Horizon spill: Enrichment of oil degraders from Gulf of Mexico
journal, May 2012
- Baelum, Jacob; Borglin, Sharon; Chakraborty, Romy
- Environmental Microbiology, Vol. 14, Issue 9
Comparative phylogenetic analysis of microbial communities in pristine and hydrocarbon-contaminated Alpine soils: Microbial community phylogeny in Alpine soil
journal, February 2007
- Labbé, Diane; Margesin, Rosa; Schinner, Franz
- FEMS Microbiology Ecology, Vol. 59, Issue 2
New Developments in the Marine Nitrogen Cycle
journal, February 2007
- Brandes, Jay A.; Devol, Allan H.; Deutsch, Curtis
- Chemical Reviews, Vol. 107, Issue 2
Oxygen Sensitivity of Anammox and Coupled N-Cycle Processes in Oxygen Minimum Zones
journal, December 2011
- Kalvelage, Tim; Jensen, Marlene M.; Contreras, Sergio
- PLoS ONE, Vol. 6, Issue 12
Study of nitrogen fixation in microbial communities of oil-contaminated marine sediment microcosms
journal, October 2006
- Musat, Florin; Harder, Jens; Widdel, Friedrich
- Environmental Microbiology, Vol. 8, Issue 10
Deep-Sea Oil Plume Enriches Indigenous Oil-Degrading Bacteria
journal, August 2010
- Hazen, Terry C.; Dubinsky, Eric A.; DeSantis, Todd Z.
- Science, Vol. 330, Issue 6001
Metagenomics reveals sediment microbial community response to Deepwater Horizon oil spill
journal, January 2014
- Mason, Olivia U.; Scott, Nicole M.; Gonzalez, Antonio
- The ISME Journal, Vol. 8, Issue 7
New Developments in the Marine Nitrogen Cycle
journal, May 2007
- Brandes, Jay A.; Devol, Allan H.; Deutsch, Curtis
- ChemInform, Vol. 38, Issue 20
Spatiotemporal persistence of multiple, diverse clades and toxins of Corynebacterium diphtheriae
journal, March 2021
- Will, Robert C.; Ramamurthy, Thandavarayan; Sharma, Naresh Chand
- Nature Communications, Vol. 12, Issue 1
SPOCD1 is an essential executor of piRNA-directed de novo DNA methylation
journal, July 2020
- Zoch, Ansgar; Auchynnikava, Tania; Berrens, Rebecca V.
- Nature, Vol. 584, Issue 7822
Hydrocarbon-degrading bacteria enriched by the Deepwater Horizon oil spill identified by cultivation and DNA-SIP
text, January 2013
- David, Berry,; D., Aitken, Michael; Tony, Gutierrez,
- The University of North Carolina at Chapel Hill University Libraries
SEED annotated Metagenome data generated from 14 benthic sediment samples taken from the Northern Gulf of Mexico, September to October 2010
dataset, January 2015
- Scott, Nicole
- Harte Research Institute
16S microbial data generated from sediment and water column samples collected from May 2010 to June 2012
dataset, January 2015
- Jack, Scott, Nicole and Gilbert,
- Harte Research Institute
New Developments in the Marine Nitrogen Cycle
journal, May 2007
- Brandes, Jay A.; Devol, Allan H.; Deutsch, Curtis
- ChemInform, Vol. 38, Issue 20
Deep-sea nutrient loss inferred from the marine dissolved N 2 /Ar ratio : DENITRIFICATION FROM GLOBAL N
journal, March 2013
- Hamme, Roberta C.; Emerson, Steven R.
- Geophysical Research Letters, Vol. 40, Issue 6
Microbial hydrocarbon degradation-bioremediation of oil spills
journal, January 1991
- Atlas, Ronald M.
- Journal of Chemical Technology & Biotechnology, Vol. 52, Issue 2
Natural seepage of crude oil into the marine environment
journal, December 2003
- Kvenvolden, K. A.; Cooper, C. K.
- Geo-Marine Letters, Vol. 23, Issue 3-4
Microbial community response to a simulated hydrocarbon spill in mangrove sediments
journal, February 2010
- Taketani, Rodrigo Gouvêa; Franco, Natália Oliveira; Rosado, Alexandre Soares
- The Journal of Microbiology, Vol. 48, Issue 1
Anaerobic ammonium oxidation by nitrite (anammox): Implications for N2 production in coastal marine sediments
journal, April 2005
- Engström, Pia; Dalsgaard, Tage; Hulth, Stefan
- Geochimica et Cosmochimica Acta, Vol. 69, Issue 8
Anaerobic ammonium oxidation (anammox) in the marine environment
journal, May 2005
- Dalsgaard, Tage; Thamdrup, Bo; Canfield, Donald E.
- Research in Microbiology, Vol. 156, Issue 4
Petroleum nitrogen compounds and oxygen compounds
journal, September 1970
- Snyder, Lloyd Robert
- Accounts of Chemical Research, Vol. 3, Issue 9
Microbial gene functions enriched in the Deepwater Horizon deep-sea oil plume
journal, August 2011
- Lu, Zhenmei; Deng, Ye; Van Nostrand, Joy D.
- The ISME Journal, Vol. 6, Issue 2
Metagenome, metatranscriptome and single-cell sequencing reveal microbial response to Deepwater Horizon oil spill
journal, June 2012
- Mason, Olivia U.; Hazen, Terry C.; Borglin, Sharon
- The ISME Journal, Vol. 6, Issue 9
Metagenomics reveals sediment microbial community response to Deepwater Horizon oil spill
journal, January 2014
- Mason, Olivia U.; Scott, Nicole M.; Gonzalez, Antonio
- The ISME Journal, Vol. 8, Issue 7
Hydrocarbon-degrading bacteria enriched by the Deepwater Horizon oil spill identified by cultivation and DNA-SIP
journal, June 2013
- Gutierrez, Tony; Singleton, David R.; Berry, David
- The ISME Journal, Vol. 7, Issue 11
Bioturbation: impact on the marine nitrogen cycle
journal, January 2011
- Laverock, Bonnie; Gilbert, Jack A.; Tait, Karen
- Biochemical Society Transactions, Vol. 39, Issue 1
Composition and fate of gas and oil released to the water column during the Deepwater Horizon oil spill
journal, July 2011
- Reddy, C. M.; Arey, J. S.; Seewald, J. S.
- Proceedings of the National Academy of Sciences, Vol. 109, Issue 50
Biodegradation of Diesel Fuel in Soil Under Various Nitrogen Addition Regimes
journal, September 2001
- Brook, Timothy R.; Stiver, Warren H.; Zytner, Richard G.
- Soil and Sediment Contamination: An International Journal, Vol. 10, Issue 5
GenBank
journal, November 2012
- Benson, Dennis A.; Cavanaugh, Mark; Clark, Karen
- Nucleic Acids Research, Vol. 41, Issue D1
Study of nitrogen fixation in microbial communities of oil-contaminated marine sediment microcosms
journal, October 2006
- Musat, Florin; Harder, Jens; Widdel, Friedrich
- Environmental Microbiology, Vol. 8, Issue 10
Comparative phylogenetic analysis of microbial communities in pristine and hydrocarbon-contaminated Alpine soils: Microbial community phylogeny in Alpine soil
journal, February 2007
- Labbé, Diane; Margesin, Rosa; Schinner, Franz
- FEMS Microbiology Ecology, Vol. 59, Issue 2
Nitrogen cycling in coastal marine ecosystems
journal, October 1999
- Herbert, R. A.
- FEMS Microbiology Reviews, Vol. 23, Issue 5
The Evolution and Future of Earth’s Nitrogen Cycle
journal, October 2010
- Canfield, Donald E.; Glazer, Alexander N.; Falkowski, Paul G.
- Science, Vol. 330, Issue 6001
Deep-Sea Oil Plume Enriches Indigenous Oil-Degrading Bacteria
journal, August 2010
- Hazen, Terry C.; Dubinsky, Eric A.; DeSantis, Todd Z.
- Science, Vol. 330, Issue 6001
Effects of Heavy Fuel Oil on the Bacterial Community Structure of a Pristine Microbial Mat
journal, August 2007
- Bordenave, S.; Goni-Urriza, M. S.; Caumette, P.
- Applied and Environmental Microbiology, Vol. 73, Issue 19
Stark Contrast in Denitrification and Anammox across the Deep Norwegian Trench in the Skagerrak
journal, September 2013
- Trimmer, Mark; Engström, Pia; Thamdrup, Bo
- Applied and Environmental Microbiology, Vol. 79, Issue 23
Changes in Benthic Denitrification, Nitrate Ammonification, and Anammox Process Rates and Nitrate and Nitrite Reductase Gene Abundances along an Estuarine Nutrient Gradient (the Colne Estuary, United Kingdom)
journal, March 2009
- Dong, L. F.; Smith, C. J.; Papaspyrou, S.
- Applied and Environmental Microbiology, Vol. 75, Issue 10
Free-Living Dinitrogen-Fixing Bacteria Isolated from Petroleum Refinery Oily Sludge
journal, January 1987
- Laguerre, Gisele; Bossand, Bernard; Bardin, Rene
- Applied and Environmental Microbiology, Vol. 53, Issue 7
Nitrification and Autotrophic Nitrifying Bacteria in a Hydrocarbon-Polluted Soil
journal, September 1999
- Deni, Jamal; Penninckx, Michel J.
- Applied and Environmental Microbiology, Vol. 65, Issue 9
Free-Living Heterotrophic Nitrogen-Fixing Bacteria Isolated from Fuel-Contaminated Antarctic Soils
journal, October 2002
- Eckford, R.; Cook, F. D.; Saul, D.
- Applied and Environmental Microbiology, Vol. 68, Issue 10
Robust Hydrocarbon Degradation and Dynamics of Bacterial Communities during Nutrient-Enhanced Oil Spill Bioremediation
journal, November 2002
- Roling, W. F. M.; Milner, M. G.; Jones, D. M.
- Applied and Environmental Microbiology, Vol. 68, Issue 11
Production of N2 through Anaerobic Ammonium Oxidation Coupled to Nitrate Reduction in Marine Sediments
journal, March 2002
- Thamdrup, B.; Dalsgaard, T.
- Applied and Environmental Microbiology, Vol. 68, Issue 3
Bacterial Community Dynamics and Hydrocarbon Degradation during a Field-Scale Evaluation of Bioremediation on a Mudflat Beach Contaminated with Buried Oil
journal, May 2004
- Roling, W. F. M.; Milner, M. G.; Jones, D. M.
- Applied and Environmental Microbiology, Vol. 70, Issue 5
Microbial Nitrogen Cycling Processes in Oxygen Minimum Zones
journal, January 2011
- Lam, Phyllis; Kuypers, Marcel M. M.
- Annual Review of Marine Science, Vol. 3, Issue 1
The metagenomics RAST server – a public resource for the automatic phylogenetic and functional analysis of metagenomes
journal, September 2008
- Meyer, F.; Paarmann, D.; D'Souza, M.
- BMC Bioinformatics, Vol. 9, Issue 1
Predicted Relative Metabolomic Turnover (PRMT): determining metabolic turnover from a coastal marine metagenomic dataset
journal, June 2011
- Larsen, Peter E.; Collart, Frank R.; Field, Dawn
- Microbial Informatics and Experimentation, Vol. 1, Issue 1
Oxygen Sensitivity of Anammox and Coupled N-Cycle Processes in Oxygen Minimum Zones
journal, December 2011
- Kalvelage, Tim; Jensen, Marlene M.; Contreras, Sergio
- PLoS ONE, Vol. 6, Issue 12
The chemistry of nitrosative stress induced by nitric oxide and reactive nitrogen oxide species. Putting perspective on stressful biological situations
journal, January 2004
- Ridnour, L. A.; Thomas, D. D.; Mancardi, D.
- Biological Chemistry, Vol. 385, Issue 1
Metagenomic analysis of microbial consortium from natural crude oil that seeps into the marine ecosystem offshore Southern California
journal, January 2014
- Hawley, Erik R.; Piao, Hailan; Scott, Nicole M.
- Standards in Genomic Sciences, Vol. 9, Issue 3
Works referencing / citing this record:
Distribution of Anaerobic Hydrocarbon-Degrading Bacteria in Soils from King George Island, Maritime Antarctica
journal, May 2017
- Sampaio, Dayanna Souza; Almeida, Juliana Rodrigues Barboza; de Jesus, Hugo E.
- Microbial Ecology, Vol. 74, Issue 4
Nitrogen Metabolism Genes from Temperate Marine Sediments
journal, March 2017
- Reyes, Carolina; Schneider, Dominik; Lipka, Marko
- Marine Biotechnology, Vol. 19, Issue 2
Dynamics and distribution of bacterial and archaeal communities in oil-contaminated temperate coastal mudflat mesocosms
journal, April 2015
- Sanni, Gbemisola O.; Coulon, Frédéric; McGenity, Terry J.
- Environmental Science and Pollution Research, Vol. 22, Issue 20
Satellite remote sensing data can be used to model marine microbial metabolite turnover
journal, July 2014
- Larsen, Peter E.; Scott, Nicole; Post, Anton F.
- The ISME Journal, Vol. 9, Issue 1
Metabolic and spatio-taxonomic response of uncultivated seafloor bacteria following the Deepwater Horizon oil spill
journal, August 2017
- Handley, K. M.; Piceno, Y. M.; Hu, P.
- The ISME Journal, Vol. 11, Issue 11
Ecological response of nitrification to oil spills and its impact on the nitrogen cycle: Ecological response of nitrification to oil spills
journal, October 2018
- Urakawa, Hidetoshi; Rajan, Suja; Feeney, Megan E.
- Environmental Microbiology, Vol. 21, Issue 1
Dimethyl phthalate altered the microbial metabolic pathways in a Mollisol: Environmental behaviour of dimethyl phthalate in soil
journal, March 2018
- Wang, Z. G.; You, Y. M.; Xu, W. H.
- European Journal of Soil Science, Vol. 69, Issue 3
The Earth Microbiome project: successes and aspirations
journal, August 2014
- Gilbert, Jack A.; Jansson, Janet K.; Knight, Rob
- BMC Biology, Vol. 12, Issue 1
A pollution gradient contributes to the taxonomic, functional, and resistome diversity of microbial communities in marine sediments
journal, July 2019
- Chen, Jiarui; McIlroy, Shelby E.; Archana, Anand
- Microbiome, Vol. 7, Issue 1
Predominance and high diversity of genes associated to denitrification in metagenomes of subantarctic coastal sediments exposed to urban pollution
journal, November 2018
- Calderoli, Priscila A.; Espínola, Fernando J.; Dionisi, Hebe M.
- PLOS ONE, Vol. 13, Issue 11
Bacterial Community Response in Deep Faroe-Shetland Channel Sediments Following Hydrocarbon Entrainment With and Without Dispersant Addition
journal, May 2018
- Perez Calderon, Luis J.; Potts, Lloyd D.; Gontikaki, Evangelia
- Frontiers in Marine Science, Vol. 5
Microbial transformation of the Deepwater Horizon oil spill—past, present, and future perspectives
journal, November 2014
- Kimes, Nikole E.; Callaghan, Amy V.; Suflita, Joseph M.
- Frontiers in Microbiology, Vol. 5
Current State of Knowledge in Microbial Degradation of Polycyclic Aromatic Hydrocarbons (PAHs): A Review
journal, August 2016
- Ghosal, Debajyoti; Ghosh, Shreya; Dutta, Tapan K.
- Frontiers in Microbiology, Vol. 7
Nitrogen Metabolism Genes from Temperate Marine Sediments
journal, March 2017
- Reyes, Carolina; Schneider, Dominik; Lipka, Marko
- Marine Biotechnology, Vol. 19, Issue 2
Metagenomic views of microbial dynamics influenced by hydrocarbon seepage in sediments of the Gulf of Mexico
journal, April 2020
- Zhao, Rui; Summers, Zarath M.; Christman, Glenn D.
- Scientific Reports, Vol. 10, Issue 1
The Earth Microbiome project: successes and aspirations
journal, August 2014
- Gilbert, Jack A.; Jansson, Janet K.; Knight, Rob
- BMC Biology, Vol. 12, Issue 1
A pollution gradient contributes to the taxonomic, functional, and resistome diversity of microbial communities in marine sediments
journal, July 2019
- Chen, Jiarui; McIlroy, Shelby E.; Archana, Anand
- Microbiome, Vol. 7, Issue 1
Predicting Ecological Roles in the Rhizosphere Using Metabolome and Transportome Modeling
journal, September 2015
- Larsen, Peter E.; Collart, Frank R.; Dai, Yang
- PLOS ONE, Vol. 10, Issue 9
The metabolic pathways and environmental controls of hydrocarbon biodegradation in marine ecosystems
journal, September 2014
- Kostka, Joel E.; Teske, Andreas P.; Joye, Samantha B.
- Frontiers in Microbiology, Vol. 5
Microbial transformation of the Deepwater Horizon oil spill—past, present, and future perspectives
journal, November 2014
- Kimes, Nikole E.; Callaghan, Amy V.; Suflita, Joseph M.
- Frontiers in Microbiology, Vol. 5
Degradation Network Reconstruction in Uric Acid and Ammonium Amendments in Oil-Degrading Marine Microcosms Guided by Metagenomic Data
journal, November 2015
- Bargiela, Rafael; Gertler, Christoph; Magagnini, Mirko
- Frontiers in Microbiology, Vol. 6
Current State of Knowledge in Microbial Degradation of Polycyclic Aromatic Hydrocarbons (PAHs): A Review
journal, August 2016
- Ghosal, Debajyoti; Ghosh, Shreya; Dutta, Tapan K.
- Frontiers in Microbiology, Vol. 7