Predicting the Responses of Soil Nitrite-Oxidizers to Multi-Factorial Global Change: A Trait-Based Approach
Abstract
Soil microbial diversity is huge and a few grams of soil contain more bacterial taxa than there are bird species on Earth. This high diversity often makes predicting the responses of soil bacteria to environmental change intractable and restricts our capacity to predict the responses of soil functions to global change. Here, using a long-term field experiment in a California grassland, we studied the main and interactive effects of three global change factors (increased atmospheric CO 2 concentration, precipitation and nitrogen addition, and all their factorial combinations, based on global change scenarios for central California) on the potential activity, abundance and dominant taxa of soil nitrite-oxidizing bacteria (NOB). Using a trait-based model, we then tested whether categorizing NOB into a few functional groups unified by physiological traits enables understanding and predicting how soil NOB respond to global environmental change. Contrasted responses to global change treatments were observed between three main NOB functional types. In particular, putatively mixotrophic Nitrobacter, rare under most treatments, became dominant under the 'High CO 2 +Nitrogen+Precipitation' treatment. The mechanistic trait-based model, which simulated ecological niches of NOB types consistent with previous ecophysiological reports, helped predicting the observed effects of global change on NOB and elucidating themore »
- Authors:
-
- Univ. of Lyon, Villeurbanne (France)
- Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States). Earth Sciences Division
- Univ. of Paris-Sud, Orsay (France); Univ. Pierre et Marie Curie, Thiverval Grignon (France)
- Univ. of Paris-Sud, Orsay (France)
- Northern Arizona Univ., Flagstaff, AZ (United States). Ecosystem Science and Society Center
- Stanford Univ., CA (United States). Dept. of Global Ecology
- Technical Univ. of Denmark, Kongens Lyngby (Denmark); Tokyo Univ. of Agriculture and Technology, Tokyo (Japan)
- Univ. of Lyon, Villeurbanne (France); Univ. of Thessaly, Larisa (Greece)
- Publication Date:
- Research Org.:
- Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States)
- Sponsoring Org.:
- USDOE Office of Science (SC)
- OSTI Identifier:
- 1378980
- Grant/Contract Number:
- AC02-05CH11231
- Resource Type:
- Accepted Manuscript
- Journal Name:
- Frontiers in Microbiology
- Additional Journal Information:
- Journal Volume: 7; Journal Issue: MAY; Journal ID: ISSN 1664-302X
- Publisher:
- Frontiers Research Foundation
- Country of Publication:
- United States
- Language:
- English
- Subject:
- 59 BASIC BIOLOGICAL SCIENCES; 54 ENVIRONMENTAL SCIENCES; bacterial functional traits; elevated CO2; nitrifiers; nitrogen fertilisation; trait-based modeling
Citation Formats
Le Roux, Xavier, Bouskill, Nicholas J., Niboyet, Audrey, Barthes, Laure, Dijkstra, Paul, Field, Chris B., Hungate, Bruce A., Lerondelle, Catherine, Pommier, Thomas, Tang, Jinyun, Terada, Akihiko, Tourna, Maria, and Poly, Franck. Predicting the Responses of Soil Nitrite-Oxidizers to Multi-Factorial Global Change: A Trait-Based Approach. United States: N. p., 2016.
Web. doi:10.3389/fmicb.2016.00628.
Le Roux, Xavier, Bouskill, Nicholas J., Niboyet, Audrey, Barthes, Laure, Dijkstra, Paul, Field, Chris B., Hungate, Bruce A., Lerondelle, Catherine, Pommier, Thomas, Tang, Jinyun, Terada, Akihiko, Tourna, Maria, & Poly, Franck. Predicting the Responses of Soil Nitrite-Oxidizers to Multi-Factorial Global Change: A Trait-Based Approach. United States. https://doi.org/10.3389/fmicb.2016.00628
Le Roux, Xavier, Bouskill, Nicholas J., Niboyet, Audrey, Barthes, Laure, Dijkstra, Paul, Field, Chris B., Hungate, Bruce A., Lerondelle, Catherine, Pommier, Thomas, Tang, Jinyun, Terada, Akihiko, Tourna, Maria, and Poly, Franck. Tue .
"Predicting the Responses of Soil Nitrite-Oxidizers to Multi-Factorial Global Change: A Trait-Based Approach". United States. https://doi.org/10.3389/fmicb.2016.00628. https://www.osti.gov/servlets/purl/1378980.
@article{osti_1378980,
title = {Predicting the Responses of Soil Nitrite-Oxidizers to Multi-Factorial Global Change: A Trait-Based Approach},
author = {Le Roux, Xavier and Bouskill, Nicholas J. and Niboyet, Audrey and Barthes, Laure and Dijkstra, Paul and Field, Chris B. and Hungate, Bruce A. and Lerondelle, Catherine and Pommier, Thomas and Tang, Jinyun and Terada, Akihiko and Tourna, Maria and Poly, Franck},
abstractNote = {Soil microbial diversity is huge and a few grams of soil contain more bacterial taxa than there are bird species on Earth. This high diversity often makes predicting the responses of soil bacteria to environmental change intractable and restricts our capacity to predict the responses of soil functions to global change. Here, using a long-term field experiment in a California grassland, we studied the main and interactive effects of three global change factors (increased atmospheric CO 2 concentration, precipitation and nitrogen addition, and all their factorial combinations, based on global change scenarios for central California) on the potential activity, abundance and dominant taxa of soil nitrite-oxidizing bacteria (NOB). Using a trait-based model, we then tested whether categorizing NOB into a few functional groups unified by physiological traits enables understanding and predicting how soil NOB respond to global environmental change. Contrasted responses to global change treatments were observed between three main NOB functional types. In particular, putatively mixotrophic Nitrobacter, rare under most treatments, became dominant under the 'High CO 2 +Nitrogen+Precipitation' treatment. The mechanistic trait-based model, which simulated ecological niches of NOB types consistent with previous ecophysiological reports, helped predicting the observed effects of global change on NOB and elucidating the underlying biotic and abiotic controls. Our results are a starting point for representing the overwhelming diversity of soil bacteria by a few functional types that can be incorporated into models of terrestrial ecosystems and biogeochemical processes.},
doi = {10.3389/fmicb.2016.00628},
journal = {Frontiers in Microbiology},
number = MAY,
volume = 7,
place = {United States},
year = {Tue May 17 00:00:00 EDT 2016},
month = {Tue May 17 00:00:00 EDT 2016}
}
Web of Science
Works referenced in this record:
A new facultatively nitrite oxidizing bacterium, Nitrobacter vulgaris sp. nov.
journal, January 1990
- Bock, Eberhard; Koops, Hans-Peter; M�ller, Uwe C.
- Archives of Microbiology, Vol. 153, Issue 2
A trait-based approach to community assembly: partitioning of species trait values into within- and among-community components
journal, February 2007
- Ackerly, D. D.; Cornwell, W. K.
- Ecology Letters, Vol. 10, Issue 2
Microorganisms and climate change: terrestrial feedbacks and mitigation options
journal, October 2010
- Singh, Brajesh K.; Bardgett, Richard D.; Smith, Pete
- Nature Reviews Microbiology, Vol. 8, Issue 11
Decline of soil microbial diversity does not influence the resistance and resilience of key soil microbial functional groups following a model disturbance
journal, September 2007
- Wertz, Sophie; Degrange, Valérie; Prosser, James I.
- Environmental Microbiology, Vol. 9, Issue 9
Kinetic characterisation of an enriched Nitrospira culture with comparison to Nitrobacter
journal, July 2007
- Blackburne, Richard; Vadivelu, Vel M.; Yuan, Zhiguo
- Water Research, Vol. 41, Issue 14
Competition betweenNitrospira spp. andNitrobacter spp. in nitrite-oxidizing bioreactors
journal, January 2006
- Nogueira, Regina; Melo, Luís F.
- Biotechnology and Bioengineering, Vol. 95, Issue 1
The Anthropocene: From Global Change to Planetary Stewardship
journal, October 2011
- Steffen, Will; Persson, Åsa; Deutsch, Lisa
- AMBIO, Vol. 40, Issue 7
A trait-based framework for predicting when and where microbial adaptation to climate change will affect ecosystem functioning
journal, September 2011
- Wallenstein, Matthew D.; Hall, Edward K.
- Biogeochemistry, Vol. 109, Issue 1-3
High rates of nitrification and nitrate turnover in undisturbed coniferous forests
journal, January 1997
- Stark, John M.; Hart, Stephen C.
- Nature, Vol. 385, Issue 6611
Nitrite concentration influences the population structure of Nitrospira-like bacteria
journal, August 2006
- Maixner, Frank; Noguera, Daniel R.; Anneser, Bettina
- Environmental Microbiology, Vol. 8, Issue 8
A novel framework for linking functional diversity of plants with other trophic levels for the quantification of ecosystem services
journal, May 2013
- Lavorel, Sandra; Storkey, Jonathan; Bardgett, Richard D.
- Journal of Vegetation Science, Vol. 24, Issue 5
Effect of nitrite concentration on the distribution and competition of nitrite-oxidizing bacteria in nitratation reactor systems and their kinetic characteristics
journal, March 2006
- Kim, Dong-Jin; Kim, Sun-Hee
- Water Research, Vol. 40, Issue 5
Emergent Biogeography of Microbial Communities in a Model Ocean
journal, March 2007
- Follows, M. J.; Dutkiewicz, S.; Grant, S.
- Science, Vol. 315, Issue 5820
Microbial mediation of biogeochemical cycles revealed by simulation of global changes with soil transplant and cropping
journal, April 2014
- Zhao, Mengxin; Xue, Kai; Wang, Feng
- The ISME Journal, Vol. 8, Issue 10
Influence of nitrite accumulation in association with seasonal patterns and mineralization of soil nitrogen in a semi-arid pine forest
journal, February 2008
- Gelfand, Ilya; Yakir, Dan
- Soil Biology and Biochemistry, Vol. 40, Issue 2
Trait-Based Representation of Biological Nitrification: Model Development, Testing, and Predicted Community Composition
journal, January 2012
- Bouskill, Nicholas J.; Tang, Jinyun; Riley, William J.
- Frontiers in Microbiology, Vol. 3
The ecological coherence of high bacterial taxonomic ranks
journal, June 2010
- Philippot, Laurent; Andersson, Siv G. E.; Battin, Tom J.
- Nature Reviews Microbiology, Vol. 8, Issue 7
Ammonia-oxidizing bacteria respond to multifactorial global change
journal, October 2004
- Horz, H. -P.; Barbrook, A.; Field, C. B.
- Proceedings of the National Academy of Sciences, Vol. 101, Issue 42
Influence of Inorganic Nitrogen Management Regime on the Diversity of Nitrite-Oxidizing Bacteria in Agricultural Grassland Soils
journal, December 2005
- Freitag, T. E.; Chang, L.; Clegg, C. D.
- Applied and Environmental Microbiology, Vol. 71, Issue 12
Phylogenetic conservatism of functional traits in microorganisms
journal, December 2012
- Martiny, Adam C.; Treseder, Kathleen; Pusch, Gordon
- The ISME Journal, Vol. 7, Issue 4
Microenvironments and distribution of nitrifying bacteria in a membrane-bound biofilm
journal, December 2000
- Schramm, Andreas; De Beer, Dirk; Gieseke, Armin
- Environmental Microbiology, Vol. 2, Issue 6
Plant functional type mapping for earth system models
journal, January 2011
- Poulter, B.; Ciais, P.; Hodson, E.
- Geoscientific Model Development, Vol. 4, Issue 4
Emergent Global Patterns of Ecosystem Structure and Function from a Mechanistic General Ecosystem Model
journal, April 2014
- Harfoot, Michael B. J.; Newbold, Tim; Tittensor, Derek P.
- PLoS Biology, Vol. 12, Issue 4
In Situ Characterization of Nitrospira-Like Nitrite-Oxidizing Bacteria Active in Wastewater Treatment Plants
journal, November 2001
- Daims, H.; Nielsen, J. L.; Nielsen, P. H.
- Applied and Environmental Microbiology, Vol. 67, Issue 11
GRASSLAND RESPONSES TO THREE YEARS OF ELEVATED TEMPERATURE, CO 2 , PRECIPITATION, AND N DEPOSITION
journal, November 2003
- Zavaleta, Erika S.; Shaw, M. Rebecca; Chiariello, Nona R.
- Ecological Monographs, Vol. 73, Issue 4
Functionally relevant diversity of closely related Nitrospira in activated sludge
journal, August 2014
- Gruber-Dorninger, Christiane; Pester, Michael; Kitzinger, Katharina
- The ISME Journal, Vol. 9, Issue 3
Elevated CO2 and nutrient addition after soil N cycling and N trace gas fluxes with early season wet-up in a California annual grassland
journal, May 1997
- Hungate, Bruce A.; Lund, Christopher P.; Pearson, Holly L.
- Biogeochemistry, Vol. 37, Issue 2, p. 89-109
Relating Phylogenetic and Functional Diversity among Denitrifiers and Quantifying their Capacity to Predict Community Functioning
journal, January 2012
- Salles, Joana Falcão; Le Roux, Xavier; Poly, Franck
- Frontiers in Microbiology, Vol. 3
Consequences of mass transfer effects on the kinetics of nitrifiers
journal, November 2005
- Manser, Reto; Gujer, Willi; Siegrist, Hansruedi
- Water Research, Vol. 39, Issue 19
Microbial Biogeography: From Taxonomy to Traits
journal, May 2008
- Green, J. L.; Bohannan, B. J. M.; Whitaker, R. J.
- Science, Vol. 320, Issue 5879
A design-constraint trade-off underpins the diversity in ecologically important traits in species Escherichia coli
journal, May 2013
- Phan, Katherine; Ferenci, Thomas
- The ISME Journal, Vol. 7, Issue 10
Shifts between Nitrospira - and Nitrobacter -like nitrite oxidizers underlie the response of soil potential nitrite oxidation to changes in tillage practices
journal, February 2010
- Attard, E.; Poly, F.; Commeaux, C.
- Environmental Microbiology, Vol. 12, Issue 2
Activity, size and structure of a Nitrobacter community as affected by organic carbon and nitrite in sterile soil
journal, October 1997
- Degrange, Valérie; Lensi, Robert; Bardin, René
- FEMS Microbiology Ecology, Vol. 24, Issue 2
From Plant Traits to Plant Communities: A Statistical Mechanistic Approach to Biodiversity
journal, November 2006
- Shipley, B.; Vile, D.; Garnier, E.
- Science, Vol. 314, Issue 5800
Marine microorganisms and global nutrient cycles
journal, September 2004
- Arrigo, Kevin R.
- Nature, Vol. 437, Issue 7057
Computational Improvements Reveal Great Bacterial Diversity and High Metal Toxicity in Soil
journal, August 2005
- Gans, J.
- Science, Vol. 309, Issue 5739
Global soil carbon projections are improved by modelling microbial processes
journal, July 2013
- Wieder, William R.; Bonan, Gordon B.; Allison, Steven D.
- Nature Climate Change, Vol. 3, Issue 10
Grassland Responses to Global Environmental Changes Suppressed by Elevated CO2
journal, December 2002
- Shaw, M. R.
- Science, Vol. 298, Issue 5600
A trait-based approach for modelling microbial litter decomposition
journal, May 2012
- Allison, S. D.
- Ecology Letters, Vol. 15, Issue 9
The role of ecological theory in microbial ecology
journal, May 2007
- Prosser, James I.; Bohannan, Brendan J. M.; Curtis, Tom P.
- Nature Reviews Microbiology, Vol. 5, Issue 5
A meta-analysis of responses of soil biota to global change
journal, January 2011
- Blankinship, Joseph C.; Niklaus, Pascal A.; Hungate, Bruce A.
- Oecologia, Vol. 165, Issue 3
Effects of steam disinfestation on community structure, abundance and activity of heterotrophic, denitrifying and nitrifying bacteria in an organic farming soil
journal, July 2008
- Roux-Michollet, D.; Czarnes, S.; Adam, B.
- Soil Biology and Biochemistry, Vol. 40, Issue 7
Oxygen consumption kinetics of Nitrosomonas europaea and Nitrobacter hamburgensis grown in mixed continuous cultures at different oxygen concentrations
journal, January 1994
- Laanbroek, Hendrikus J.; Bodelier, Paul L. E.; Gerards, Saskia
- Archives of Microbiology, Vol. 161, Issue 2, p. 156-162
Comparison of Oxidation Kinetics of Nitrite-Oxidizing Bacteria: Nitrite Availability as a Key Factor in Niche Differentiation
journal, November 2014
- Nowka, Boris; Daims, Holger; Spieck, Eva
- Applied and Environmental Microbiology, Vol. 81, Issue 2
The emergence and promise of functional biogeography
journal, September 2014
- Violle, C.; Reich, P. B.; Pacala, S. W.
- Proceedings of the National Academy of Sciences, Vol. 111, Issue 38
Testing interactive effects of global environmental changes on soil nitrogen cycling
journal, May 2011
- Niboyet, A.; Le Roux, X.; Dijkstra, P.
- Ecosphere, Vol. 2, Issue 5
Multidimensional Optimality of Microbial Metabolism
journal, May 2012
- Schuetz, R.; Zamboni, N.; Zampieri, M.
- Science, Vol. 336, Issue 6081
Archaeal and bacterial ammonia-oxidisers in soil: the quest for niche specialisation and differentiation
journal, November 2012
- Prosser, James I.; Nicol, Graeme W.
- Trends in Microbiology, Vol. 20, Issue 11
Effects of multiple global change treatments on soil N2O fluxes
journal, October 2011
- Brown, Jamie R.; Blankinship, Joseph C.; Niboyet, Audrey
- Biogeochemistry, Vol. 109, Issue 1-3
NxrB encoding the beta subunit of nitrite oxidoreductase as functional and phylogenetic marker for nitrite-oxidizing N itrospira : Functional and phylogenetic marker for
journal, November 2013
- Pester, Michael; Maixner, Frank; Berry, David
- Environmental Microbiology, Vol. 16, Issue 10
Spatial Modeling of Nitrifier Microhabitats in Soil
journal, January 2001
- Grundmann, G. L.; Dechesne, A.; Bartoli, F.
- Soil Science Society of America Journal, Vol. 65, Issue 6
Toward an Ecological Classification of soil Bacteria
journal, June 2007
- Fierer, Noah; Bradford, Mark A.; Jackson, Robert B.
- Ecology, Vol. 88, Issue 6
Effects of long-term fertilization of forest soils on potential nitrification and on the abundance and community structure of ammonia oxidizers and nitrite oxidizers
journal, October 2011
- Wertz, Sophie; Leigh, Adam K. K.; Grayston, Sue J.
- FEMS Microbiology Ecology, Vol. 79, Issue 1
New facultative lithoautotrophic nitrite-oxidizing bacteria
journal, December 1983
- Bock, Eberhard; Sundermeyer-Klinger, Hilke; Stackebrandt, Erko
- Archives of Microbiology, Vol. 136, Issue 4
A meta-analysis of responses of soil biota to global change
journal, January 2011
- Blankinship, Joseph C.; Niklaus, Pascal A.; Hungate, Bruce A.
- Oecologia, Vol. 165, Issue 3
Effects of multiple global change treatments on soil N2O fluxes
journal, October 2011
- Brown, Jamie R.; Blankinship, Joseph C.; Niboyet, Audrey
- Biogeochemistry, Vol. 109, Issue 1-3
The Anthropocene: From Global Change to Planetary Stewardship
journal, October 2011
- Steffen, Will; Persson, Åsa; Deutsch, Lisa
- AMBIO, Vol. 40, Issue 7
Influence of nitrite accumulation in association with seasonal patterns and mineralization of soil nitrogen in a semi-arid pine forest
journal, February 2008
- Gelfand, Ilya; Yakir, Dan
- Soil Biology and Biochemistry, Vol. 40, Issue 2
Consequences of mass transfer effects on the kinetics of nitrifiers
journal, November 2005
- Manser, Reto; Gujer, Willi; Siegrist, Hansruedi
- Water Research, Vol. 39, Issue 19
Effect of nitrite concentration on the distribution and competition of nitrite-oxidizing bacteria in nitratation reactor systems and their kinetic characteristics
journal, March 2006
- Kim, Dong-Jin; Kim, Sun-Hee
- Water Research, Vol. 40, Issue 5
Kinetic characterisation of an enriched Nitrospira culture with comparison to Nitrobacter
journal, July 2007
- Blackburne, Richard; Vadivelu, Vel M.; Yuan, Zhiguo
- Water Research, Vol. 41, Issue 14
Novel techniques for analysing microbial diversity in natural and perturbed environments
journal, September 1998
- Torsvik, Vigdis; Daae, Frida Lise; Sandaa, Ruth-Anne
- Journal of Biotechnology, Vol. 64, Issue 1
Functionally relevant diversity of closely related Nitrospira in activated sludge
journal, August 2014
- Gruber-Dorninger, Christiane; Pester, Michael; Kitzinger, Katharina
- The ISME Journal, Vol. 9, Issue 3
Microbial mediation of biogeochemical cycles revealed by simulation of global changes with soil transplant and cropping
journal, April 2014
- Zhao, Mengxin; Xue, Kai; Wang, Feng
- The ISME Journal, Vol. 8, Issue 10
Marine microorganisms and global nutrient cycles
journal, September 2004
- Arrigo, Kevin R.
- Nature, Vol. 437, Issue 7057
Global soil carbon projections are improved by modelling microbial processes
journal, July 2013
- Wieder, William R.; Bonan, Gordon B.; Allison, Steven D.
- Nature Climate Change, Vol. 3, Issue 10
The role of ecological theory in microbial ecology
journal, May 2007
- Prosser, James I.; Bohannan, Brendan J. M.; Curtis, Tom P.
- Nature Reviews Microbiology, Vol. 5, Issue 5
The ecological coherence of high bacterial taxonomic ranks
journal, June 2010
- Philippot, Laurent; Andersson, Siv G. E.; Battin, Tom J.
- Nature Reviews Microbiology, Vol. 8, Issue 7
Microenvironments and distribution of nitrifying bacteria in a membrane-bound biofilm
journal, December 2000
- Schramm, Andreas; De Beer, Dirk; Gieseke, Armin
- Environmental Microbiology, Vol. 2, Issue 6
Ammonia-oxidizing bacteria respond to multifactorial global change
journal, October 2004
- Horz, H. -P.; Barbrook, A.; Field, C. B.
- Proceedings of the National Academy of Sciences, Vol. 101, Issue 42
The emergence and promise of functional biogeography
journal, September 2014
- Violle, C.; Reich, P. B.; Pacala, S. W.
- Proceedings of the National Academy of Sciences, Vol. 111, Issue 38
A trait-based approach to community assembly: partitioning of species trait values into within- and among-community components
journal, February 2007
- Ackerly, D. D.; Cornwell, W. K.
- Ecology Letters, Vol. 10, Issue 2
A trait-based approach for modelling microbial litter decomposition
journal, May 2012
- Allison, S. D.
- Ecology Letters, Vol. 15, Issue 9
Nitrite concentration influences the population structure of Nitrospira-like bacteria
journal, August 2006
- Maixner, Frank; Noguera, Daniel R.; Anneser, Bettina
- Environmental Microbiology, Vol. 8, Issue 8
Decline of soil microbial diversity does not influence the resistance and resilience of key soil microbial functional groups following a model disturbance
journal, September 2007
- Wertz, Sophie; Degrange, Valérie; Prosser, James I.
- Environmental Microbiology, Vol. 9, Issue 9
Shifts between Nitrospira - and Nitrobacter -like nitrite oxidizers underlie the response of soil potential nitrite oxidation to changes in tillage practices
journal, February 2010
- Attard, E.; Poly, F.; Commeaux, C.
- Environmental Microbiology, Vol. 12, Issue 2
A novel framework for linking functional diversity of plants with other trophic levels for the quantification of ecosystem services
journal, May 2013
- Lavorel, Sandra; Storkey, Jonathan; Bardgett, Richard D.
- Journal of Vegetation Science, Vol. 24, Issue 5
Microbial Biogeography: From Taxonomy to Traits
journal, May 2008
- Green, J. L.; Bohannan, B. J. M.; Whitaker, R. J.
- Science, Vol. 320, Issue 5879
Multidimensional Optimality of Microbial Metabolism
journal, May 2012
- Schuetz, R.; Zamboni, N.; Zampieri, M.
- Science, Vol. 336, Issue 6081
Emergent Global Patterns of Ecosystem Structure and Function from a Mechanistic General Ecosystem Model
journal, April 2014
- Harfoot, Michael B. J.; Newbold, Tim; Tittensor, Derek P.
- PLoS Biology, Vol. 12, Issue 4
GRASSLAND RESPONSES TO THREE YEARS OF ELEVATED TEMPERATURE, CO 2 , PRECIPITATION, AND N DEPOSITION
journal, November 2003
- Zavaleta, Erika S.; Shaw, M. Rebecca; Chiariello, Nona R.
- Ecological Monographs, Vol. 73, Issue 4
Toward an Ecological Classification of soil Bacteria
journal, June 2007
- Fierer, Noah; Bradford, Mark A.; Jackson, Robert B.
- Ecology, Vol. 88, Issue 6
Spatial Modeling of Nitrifier Microhabitats in Soil
journal, January 2001
- Grundmann, G. L.; Dechesne, A.; Bartoli, F.
- Soil Science Society of America Journal, Vol. 65, Issue 6
Trait-Based Representation of Biological Nitrification: Model Development, Testing, and Predicted Community Composition
journal, January 2012
- Bouskill, Nicholas J.; Tang, Jinyun; Riley, William J.
- Frontiers in Microbiology, Vol. 3
Works referencing / citing this record:
Toxicity of TiO 2 nanoparticles on soil nitrification at environmentally relevant concentrations: Lack of classical dose–response relationships
journal, February 2017
- Simonin, Marie; Martins, Jean M. F.; Le Roux, Xavier
- Nanotoxicology, Vol. 11, Issue 2
Biological inhibition of soil nitrification by forest tree species affects Nitrobacter populations
journal, August 2019
- Laffite, Amandine; Florio, Alessandro; Andrianarisoa, Kasaina Sitraka
- Environmental Microbiology, Vol. 22, Issue 3
Evidence for Microbial Mediated NO3− Cycling Within Floodplain Sediments During Groundwater Fluctuations
journal, July 2019
- Bouskill, Nicholas J.; Conrad, Mark E.; Bill, Markus
- Frontiers in Earth Science, Vol. 7
Nutrient and Rainfall Additions Shift Phylogenetically Estimated Traits of Soil Microbial Communities
journal, July 2017
- Gravuer, Kelly; Eskelinen, Anu
- Frontiers in Microbiology, Vol. 8
Controls and Adaptive Management of Nitrification in Agricultural Soils
journal, August 2019
- Norton, Jeanette; Ouyang, Yang
- Frontiers in Microbiology, Vol. 10
SUPECA kinetics for scaling redox reactions in networks of mixed substrates and consumers and an example application to aerobic soil respiration
journal, January 2017
- Tang, Jin-Yun; Riley, William J.
- Geoscientific Model Development, Vol. 10, Issue 9
Adaptation of soil nitrifiers to very low nitrogen level jeopardizes the efficiency of chemical fertilization in west african moist savannas
journal, August 2017
- Assémien, Féline L.; Pommier, Thomas; Gonnety, Jean T.
- Scientific Reports, Vol. 7, Issue 1
Geospatial variation in co‐occurrence networks of nitrifying microbial guilds
journal, November 2018
- Jones, Christopher M.; Hallin, Sara
- Molecular Ecology, Vol. 28, Issue 2
Nutrient and Rainfall Additions Shift Phylogenetically Estimated Traits of Soil Microbial Communities
journal, July 2017
- Gravuer, Kelly; Eskelinen, Anu
- Frontiers in Microbiology, Vol. 8
Controls and Adaptive Management of Nitrification in Agricultural Soils
journal, August 2019
- Norton, Jeanette; Ouyang, Yang
- Frontiers in Microbiology, Vol. 10