DOE PAGES title logo U.S. Department of Energy
Office of Scientific and Technical Information

Title: Comparative Study of Effects of CO2 Concentration and pH on Microbial Communities from a Saline Aquifer, a Depleted Oil Reservoir, and a Freshwater Aquifer

Abstract

Injected CO2 from geologic carbon storage is expected to impact the microbial communities of proposed storage sites, such as depleted oil reservoirs and deep saline aquifers, as well as overlying freshwater aquifers at risk of receiving leaking CO2. Microbial community change in these subsurface sites may affect injectivity of CO2, permanence of stored CO2, and shallow subsurface water quality. The effect of CO2 concentration on the microbial communities in fluid collected from a depleted oil reservoir and a freshwater aquifer was examined at subsurface pressures and temperatures. The community was exposed to 0%, 1%, 10%, and 100% pCO2 for 56 days. Bacterial community structure was analyzed through 16S rRNA gene clone libraries, and total bacterial abundance was estimated through quantitative polymerase chain reaction. Changes in the microbial community observed in the depleted oil reservoir samples and freshwater samples were compared to previous results from CO2-exposed deep saline aquifer fluids. Overall, results suggest that CO2 exposure to microbial communities will result in pH-dependent population change, and the CO2-selected microbial communities will vary among sites. In conclusion, this is the first study to compare the response of multiple subsurface microbial communities at conditions expected during geologic carbon storage, increasing the understanding ofmore » environmental drivers for microbial community changes in CO2-exposed environments.« less

Authors:
 [1];  [2];  [2]
  1. National Energy Technology Lab. (NETL), Pittsburgh, PA, (United States). Office of Research and Development
  2. Carnegie Mellon Univ., Pittsburgh, PA (United States). Dept. of Civil and Environmental Engineering
Publication Date:
Research Org.:
National Energy Technology Lab. (NETL), Albany, OR (United States)
Sponsoring Org.:
USDOE
OSTI Identifier:
1307331
Report Number(s):
NETL-PUB-20090
Journal ID: ISSN 1092-8758
Resource Type:
Accepted Manuscript
Journal Name:
Environmental Engineering Science
Additional Journal Information:
Journal Volume: 33; Journal Issue: 10; Journal ID: ISSN 1092-8758
Publisher:
Mary Ann Liebert, Inc.
Country of Publication:
United States
Language:
English
Subject:
54 ENVIRONMENTAL SCIENCES; Subsurface microbial communities; geologic carbon storage; carbon sequestration

Citation Formats

Gulliver, Djuna M., Lowry, Gregory V., and Gregory, Kelvin B. Comparative Study of Effects of CO2 Concentration and pH on Microbial Communities from a Saline Aquifer, a Depleted Oil Reservoir, and a Freshwater Aquifer. United States: N. p., 2016. Web. doi:10.1089/ees.2015.0368.
Gulliver, Djuna M., Lowry, Gregory V., & Gregory, Kelvin B. Comparative Study of Effects of CO2 Concentration and pH on Microbial Communities from a Saline Aquifer, a Depleted Oil Reservoir, and a Freshwater Aquifer. United States. https://doi.org/10.1089/ees.2015.0368
Gulliver, Djuna M., Lowry, Gregory V., and Gregory, Kelvin B. Tue . "Comparative Study of Effects of CO2 Concentration and pH on Microbial Communities from a Saline Aquifer, a Depleted Oil Reservoir, and a Freshwater Aquifer". United States. https://doi.org/10.1089/ees.2015.0368. https://www.osti.gov/servlets/purl/1307331.
@article{osti_1307331,
title = {Comparative Study of Effects of CO2 Concentration and pH on Microbial Communities from a Saline Aquifer, a Depleted Oil Reservoir, and a Freshwater Aquifer},
author = {Gulliver, Djuna M. and Lowry, Gregory V. and Gregory, Kelvin B.},
abstractNote = {Injected CO2 from geologic carbon storage is expected to impact the microbial communities of proposed storage sites, such as depleted oil reservoirs and deep saline aquifers, as well as overlying freshwater aquifers at risk of receiving leaking CO2. Microbial community change in these subsurface sites may affect injectivity of CO2, permanence of stored CO2, and shallow subsurface water quality. The effect of CO2 concentration on the microbial communities in fluid collected from a depleted oil reservoir and a freshwater aquifer was examined at subsurface pressures and temperatures. The community was exposed to 0%, 1%, 10%, and 100% pCO2 for 56 days. Bacterial community structure was analyzed through 16S rRNA gene clone libraries, and total bacterial abundance was estimated through quantitative polymerase chain reaction. Changes in the microbial community observed in the depleted oil reservoir samples and freshwater samples were compared to previous results from CO2-exposed deep saline aquifer fluids. Overall, results suggest that CO2 exposure to microbial communities will result in pH-dependent population change, and the CO2-selected microbial communities will vary among sites. In conclusion, this is the first study to compare the response of multiple subsurface microbial communities at conditions expected during geologic carbon storage, increasing the understanding of environmental drivers for microbial community changes in CO2-exposed environments.},
doi = {10.1089/ees.2015.0368},
journal = {Environmental Engineering Science},
number = 10,
volume = 33,
place = {United States},
year = {Tue Aug 09 00:00:00 EDT 2016},
month = {Tue Aug 09 00:00:00 EDT 2016}
}

Journal Article:
Free Publicly Available Full Text
Publisher's Version of Record

Citation Metrics:
Cited by: 11 works
Citation information provided by
Web of Science

Save / Share:

Works referenced in this record:

Antibiotic Resistance Patterns of Metal-Tolerant Bacteria Isolated from an Estuary
journal, October 1977

  • Allen, D. A.; Austin, B.; Colwell, R. R.
  • Antimicrobial Agents and Chemotherapy, Vol. 12, Issue 4
  • DOI: 10.1128/AAC.12.4.545

Basic Local Alignment Search Tool
journal, October 1990


Phylogenetic identification and in situ detection of individual microbial cells without cultivation.
journal, January 1995


Expanding frontiers in deep subsurface microbiology
journal, April 2005


Simultaneous CO2 injection and water production to optimise aquifer storage capacity
journal, May 2011

  • Bergmo, Per Eirik S.; Grimstad, Alv-Arne; Lindeberg, Erik
  • International Journal of Greenhouse Gas Control, Vol. 5, Issue 3
  • DOI: 10.1016/j.ijggc.2010.09.002

Effect of Microbial Weathering on Carbonate Rocks
journal, November 2008


Microbially enhanced geologic containment of sequestered supercritical CO2
journal, February 2009


Monitoring CO 2 Intrusion and Associated Geochemical Transformations in a Shallow Groundwater System Using Complex Electrical Methods
journal, July 2012

  • Dafflon, Baptiste; Wu, Yuxin; Hubbard, Susan S.
  • Environmental Science & Technology, Vol. 47, Issue 1
  • DOI: 10.1021/es301260e

Isolation and identification of cobalt- and caesium-resistant bacteria from a nuclear fuel storage pond
journal, September 2014

  • Dekker, Linda; Osborne, Thomas H.; Santini, Joanne M.
  • FEMS Microbiology Letters, Vol. 359, Issue 1
  • DOI: 10.1111/1574-6968.12562

Archaea in coastal marine environments.
journal, June 1992


Bacterial inactivation by using near- and supercritical carbon dioxide
journal, August 1999

  • Dillow, A. K.; Dehghani, F.; Hrkach, J. S.
  • Proceedings of the National Academy of Sciences, Vol. 96, Issue 18
  • DOI: 10.1073/pnas.96.18.10344

Bottled mineral water as a potential source of antibiotic resistant bacteria
journal, July 2012


Aggrandizing power output from Shewanella oneidensis MR-1 microbial fuel cells using calcium chloride
journal, January 2012

  • Fitzgerald, Lisa A.; Petersen, Emily R.; Gross, Benjamin J.
  • Biosensors and Bioelectronics, Vol. 31, Issue 1
  • DOI: 10.1016/j.bios.2011.11.024

Viability and Adaptation Potential of Indigenous Microorganisms from Natural Gas Field Fluids in High Pressure Incubations with Supercritical CO 2
journal, January 2014

  • Frerichs, Janin; Rakoczy, Jana; Ostertag-Henning, Christian
  • Environmental Science & Technology, Vol. 48, Issue 2
  • DOI: 10.1021/es4027985

Microbial influence on metal mobility and application for bioremediation
journal, October 2004


Effect of carbon dioxide on growth of Pseudomonas fluorescens
journal, August 1979


Effect of CO 2(aq) Exposure on a Freshwater Aquifer Microbial Community from Simulated Geologic Carbon Storage Leakage
journal, November 2014

  • Gulliver, Djuna M.; Lowry, Gregory V.; Gregory, Kelvin B.
  • Environmental Science & Technology Letters, Vol. 1, Issue 12
  • DOI: 10.1021/ez500337v

Identification of Antimony- and Arsenic-Oxidizing Bacteria Associated with Antimony Mine Tailing
journal, January 2013

  • Hamamura, Natsuko; Fukushima, Koh; Itai, Takaaki
  • Microbes and Environments, Vol. 28, Issue 2
  • DOI: 10.1264/jsme2.ME12217

Key roles of pH and calcium metabolism in microbial carbonate precipitation
journal, March 2002

  • Hammes, Frederik; Verstraete*, Willy
  • Reviews in Environmental Science and Bio/Technology, Vol. 1, Issue 1
  • DOI: 10.1023/A:1015135629155

Electron Transfer by Desulfobulbus propionicus to Fe(III) and Graphite Electrodes
journal, February 2004


Bellerophon: a program to detect chimeric sequences in multiple sequence alignments
journal, April 2004


Escherichia coli in the Environment: Implications for Water Quality and Human Health
journal, January 2008

  • Ishii, Satoshi; Sadowsky, Michael J.
  • Microbes and Environments, Vol. 23, Issue 2
  • DOI: 10.1264/jsme2.23.101

Carbon dioxide reaction processes in a model brine aquifer at 200 °C and 200 bars: implications for geologic sequestration of carbon
journal, July 2003


Potential environmental issues of CO2 storage in deep saline aquifers: Geochemical results from the Frio-I Brine Pilot test, Texas, USA
journal, June 2009


Degradation of Well Cement by CO 2 under Geologic Sequestration Conditions
journal, July 2007

  • Kutchko, Barbara G.; Strazisar, Brian R.; Dzombak, David A.
  • Environmental Science & Technology, Vol. 41, Issue 13
  • DOI: 10.1021/es062828c

Biology of Pseudomonas stutzeri
journal, June 2006

  • Lalucat, J.; Bennasar, A.; Bosch, R.
  • Microbiology and Molecular Biology Reviews, Vol. 70, Issue 2
  • DOI: 10.1128/MMBR.00047-05

Rapid determination of 16S ribosomal RNA sequences for phylogenetic analyses.
journal, October 1985

  • Lane, D. J.; Pace, B.; Olsen, G. J.
  • Proceedings of the National Academy of Sciences, Vol. 82, Issue 20
  • DOI: 10.1073/pnas.82.20.6955

Microbial characterization of basalt formation waters targeted for geological carbon sequestration
journal, March 2013

  • Lavalleur, Heather J.; Colwell, Frederick S.
  • FEMS Microbiology Ecology, Vol. 85, Issue 1
  • DOI: 10.1111/1574-6941.12098

Instability and decay of the primary structure of DNA
journal, April 1993


Potential Impacts of Leakage from Deep CO 2 Geosequestration on Overlying Freshwater Aquifers
journal, December 2010

  • Little, Mark G.; Jackson, Robert B.
  • Environmental Science & Technology, Vol. 44, Issue 23
  • DOI: 10.1021/es102235w

UniFrac: an effective distance metric for microbial community comparison
journal, September 2010

  • Lozupone, Catherine; Lladser, Manuel E.; Knights, Dan
  • The ISME Journal, Vol. 5, Issue 2
  • DOI: 10.1038/ismej.2010.133

The resistance to carbon dioxide of some food related bacteria
journal, January 1983

  • Molin, G�ran
  • European Journal of Applied Microbiology and Biotechnology, Vol. 18, Issue 4
  • DOI: 10.1007/BF00501511

Sporomusa, a new genus of gram-negative anaerobic bacteria including Sporomusa sphaeroides spec. nov. and Sporomusa ovata spec. nov.
journal, November 1984

  • M�ller, Bernhard; O�mer, Rolf; Howard, Bernard H.
  • Archives of Microbiology, Vol. 139, Issue 4
  • DOI: 10.1007/BF00408385

Heat degradation of eukaryotic and bacterial DNA: an experimental model for paleomicrobiology
journal, January 2012

  • Tung, Nguyen-Hieu; Aboudharam, Gérard; Drancourt, Michel
  • BMC Research Notes, Vol. 5, Issue 1
  • DOI: 10.1186/1756-0500-5-528

Microbial Stimulation and Succession following a Test Well Injection Simulating CO₂ Leakage into a Shallow Newark Basin Aquifer
journal, January 2015


Germination of spores of Bacillales and Clostridiales species: mechanisms and proteins involved
journal, February 2011

  • Paredes-Sabja, Daniel; Setlow, Peter; Sarker, Mahfuzur R.
  • Trends in Microbiology, Vol. 19, Issue 2
  • DOI: 10.1016/j.tim.2010.10.004

Microbial activity and chemical weathering in the Middendorf aquifer, South Carolina
journal, January 2009


Historical evolution and current status of the taxonomy of genus Pseudomonas
journal, December 2009

  • Peix, Alvaro; Ramírez-Bahena, Martha-Helena; Velázquez, Encarna
  • Infection, Genetics and Evolution, Vol. 9, Issue 6
  • DOI: 10.1016/j.meegid.2009.08.001

Group-specific 16S rRNA hybridization probes to describe natural communities of methanogens.
journal, January 1994


Precipitation of minerals by 22 species of moderately halophilic bacteria in artificial marine salts media: Influence of salt concentration
journal, September 2006

  • Rivadeneyra, M. A.; Delgado, R.; Párraga, J.
  • Folia Microbiologica, Vol. 51, Issue 5
  • DOI: 10.1007/BF02931589

Biomineralization of carbonate and phosphate by moderately halophilic bacteria: Mineral precipitation by halophilic bacteria
journal, August 2007

  • Sánchez-Román, Mónica; Rivadeneyra, Maria A.; Vasconcelos, Crisogono
  • FEMS Microbiology Ecology, Vol. 61, Issue 2
  • DOI: 10.1111/j.1574-6941.2007.00336.x

Biosurfactants, bioemulsifiers and exopolysaccharides from marine microorganisms
journal, July 2010


Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities
journal, October 2009

  • Schloss, P. D.; Westcott, S. L.; Ryabin, T.
  • Applied and Environmental Microbiology, Vol. 75, Issue 23, p. 7537-7541
  • DOI: 10.1128/AEM.01541-09

Effects of high CO2 concentrations on ecophysiologically different microorganisms
journal, October 2012


Genetic characterization of Arcobacter isolates from various sources
journal, December 2012


Assessing risk to fresh water resources from long term CO2 injection–laboratory and field studies
journal, February 2009


Quantitative Analysis of Small-Subunit rRNA Genes in Mixed Microbial Populations via 5'-Nuclease Assays
journal, November 2000


Effect of Dissolved CO 2 on a Shallow Groundwater System: A Controlled Release Field Experiment
journal, August 2012

  • Trautz, Robert C.; Pugh, John D.; Varadharajan, Charuleka
  • Environmental Science & Technology, Vol. 47, Issue 1
  • DOI: 10.1021/es301280t

Biodeterioration of stone: a review
journal, December 2000


CO2 exposure at pressure impacts metabolism and stress responses in the model sulfate-reducing bacterium Desulfovibrio vulgaris strain Hildenborough
journal, September 2014

  • Wilkins, Michael J.; Hoyt, David W.; Marshall, Matthew J.
  • Frontiers in Microbiology, Vol. 5
  • DOI: 10.3389/fmicb.2014.00507

Viability and Metal Reduction of Shewanella oneidensis MR-1 under CO 2 Stress: Implications for Ecological Effects of CO 2 Leakage from Geologic CO 2 Sequestration
journal, December 2010

  • Wu, Bing; Shao, Hongbo; Wang, Zhipeng
  • Environmental Science & Technology, Vol. 44, Issue 23
  • DOI: 10.1021/es102299j

Sterilization using high-pressure carbon dioxide
journal, October 2006

  • Zhang, Jian; Davis, Thomas A.; Matthews, Michael A.
  • The Journal of Supercritical Fluids, Vol. 38, Issue 3
  • DOI: 10.1016/j.supflu.2005.05.005

Works referencing / citing this record:

The Impact of Indigenous Microorganisms on the Mineral Corrosion and Mineral Trapping in the SO 2 Co-injected CO 2 -Saline-Sandstone Interaction
journal, October 2018