Complete genome sequence of Pelosinus sp. strain UFO1 assembled using single-molecule real-time DNA sequencing technology
Abstract
Pelosinus fermentans strain R7 was isolated from Russian kaolin clays as the type strain and it can reduce Fe(III) during fermentative growth (1). Draft genome sequences for P. fermentans R7 and four strains from Hanford, Washington, USA, have been published (2–4). The P. fermentans 16S rRNA sequence dominated the lactate-based enrichment cultures from three geochemically contrasting soils from the Melton Branch Watershed, Oak Ridge, Tennessee, USA (5) and also at another stimulated, uraniumcontaminated field site near Oak Ridge (6). For the current work, strain UFO1 was isolated from pristine sediments at a background field site in Oak Ridge and characterized as facilitating U(VI) reduction and precipitation with phosphate (7).
- Authors:
-
- Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States); Univ. of Tennessee, Knoxville, TN (United States)
- Univ. of Tennessee, Knoxville, TN (United States)
- Idaho State Univ., Pocatello, ID (United States)
- Idaho National Lab. (INL), Idaho Falls, ID (United States)
- Univ. of Georgia, Athens, GA (United States)
- Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States)
- Publication Date:
- Research Org.:
- Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States)
- Sponsoring Org.:
- USDOE Office of Science (SC), Biological and Environmental Research (BER)
- OSTI Identifier:
- 1215523
- Report Number(s):
- INL/JOU-14-33908
Journal ID: ISSN 2169-8287
- Grant/Contract Number:
- AC02-05CH11231; AC07-05ID14517; AC05-00OR22725
- Resource Type:
- Accepted Manuscript
- Journal Name:
- Genome Announcements
- Additional Journal Information:
- Journal Volume: 2; Journal Issue: 5; Journal ID: ISSN 2169-8287
- Publisher:
- American Society for Microbiology
- Country of Publication:
- United States
- Language:
- English
- Subject:
- 59 BASIC BIOLOGICAL SCIENCES/GENOMICS/GENOME RESEARCH; genome sequence; Pelosinus; strain UFO1
Citation Formats
Brown, Steven D., Utturkar, Sagar M., Magnuson, Timothy S., Ray, Allison E., Poole, Farris L., Lancaster, W. Andrew, Thorgersen, Michael P., Adams, Michael W. W., and Elias, Dwayne A. Complete genome sequence of Pelosinus sp. strain UFO1 assembled using single-molecule real-time DNA sequencing technology. United States: N. p., 2014.
Web. doi:10.1128/genomeA.00881-14.
Brown, Steven D., Utturkar, Sagar M., Magnuson, Timothy S., Ray, Allison E., Poole, Farris L., Lancaster, W. Andrew, Thorgersen, Michael P., Adams, Michael W. W., & Elias, Dwayne A. Complete genome sequence of Pelosinus sp. strain UFO1 assembled using single-molecule real-time DNA sequencing technology. United States. https://doi.org/10.1128/genomeA.00881-14
Brown, Steven D., Utturkar, Sagar M., Magnuson, Timothy S., Ray, Allison E., Poole, Farris L., Lancaster, W. Andrew, Thorgersen, Michael P., Adams, Michael W. W., and Elias, Dwayne A. Thu .
"Complete genome sequence of Pelosinus sp. strain UFO1 assembled using single-molecule real-time DNA sequencing technology". United States. https://doi.org/10.1128/genomeA.00881-14. https://www.osti.gov/servlets/purl/1215523.
@article{osti_1215523,
title = {Complete genome sequence of Pelosinus sp. strain UFO1 assembled using single-molecule real-time DNA sequencing technology},
author = {Brown, Steven D. and Utturkar, Sagar M. and Magnuson, Timothy S. and Ray, Allison E. and Poole, Farris L. and Lancaster, W. Andrew and Thorgersen, Michael P. and Adams, Michael W. W. and Elias, Dwayne A.},
abstractNote = {Pelosinus fermentans strain R7 was isolated from Russian kaolin clays as the type strain and it can reduce Fe(III) during fermentative growth (1). Draft genome sequences for P. fermentans R7 and four strains from Hanford, Washington, USA, have been published (2–4). The P. fermentans 16S rRNA sequence dominated the lactate-based enrichment cultures from three geochemically contrasting soils from the Melton Branch Watershed, Oak Ridge, Tennessee, USA (5) and also at another stimulated, uraniumcontaminated field site near Oak Ridge (6). For the current work, strain UFO1 was isolated from pristine sediments at a background field site in Oak Ridge and characterized as facilitating U(VI) reduction and precipitation with phosphate (7).},
doi = {10.1128/genomeA.00881-14},
journal = {Genome Announcements},
number = 5,
volume = 2,
place = {United States},
year = {Thu Sep 04 00:00:00 EDT 2014},
month = {Thu Sep 04 00:00:00 EDT 2014}
}
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