Image analysis of anatomical traits in stalk transections of maize and other grasses
Abstract
Grass stalks architecturally support leaves and reproductive structures, functionally support the transport of water and nutrients, and are harvested for multiple agricultural uses. Research on these basic and applied aspects of grass stalks would benefit from improved capabilities for measuring internal anatomical features. In particular, methods suitable for phenotyping populations of plants are needed.
- Authors:
-
- Univ. of Wisconsin, Madison, WI (United States). Dept. of Botany
- Univ. of Wisconsin, Madison, WI (United States). Dept. of Agronomy; DOE Great Lakes Bioenergy Research Center (GLBRC), Madison, WI (United States)
- Publication Date:
- Research Org.:
- Great Lakes Bioenergy Research Center (GLBRC), Madison, WI (United States)
- Sponsoring Org.:
- USDOE
- OSTI Identifier:
- 1184805
- Grant/Contract Number:
- FC02-07ER64494
- Resource Type:
- Accepted Manuscript
- Journal Name:
- Plant Methods
- Additional Journal Information:
- Journal Volume: 11; Journal Issue: 1; Journal ID: ISSN 1746-4811
- Publisher:
- BioMed Central
- Country of Publication:
- United States
- Language:
- English
- Subject:
- 60 APPLIED LIFE SCIENCES; 09 BIOMASS FUELS
Citation Formats
Heckwolf, Sven, Heckwolf, Marlies, Kaeppler, Shawn M., de Leon, Natalia, and Spalding, Edgar P. Image analysis of anatomical traits in stalk transections of maize and other grasses. United States: N. p., 2015.
Web. doi:10.1186/s13007-015-0070-x.
Heckwolf, Sven, Heckwolf, Marlies, Kaeppler, Shawn M., de Leon, Natalia, & Spalding, Edgar P. Image analysis of anatomical traits in stalk transections of maize and other grasses. United States. https://doi.org/10.1186/s13007-015-0070-x
Heckwolf, Sven, Heckwolf, Marlies, Kaeppler, Shawn M., de Leon, Natalia, and Spalding, Edgar P. Thu .
"Image analysis of anatomical traits in stalk transections of maize and other grasses". United States. https://doi.org/10.1186/s13007-015-0070-x. https://www.osti.gov/servlets/purl/1184805.
@article{osti_1184805,
title = {Image analysis of anatomical traits in stalk transections of maize and other grasses},
author = {Heckwolf, Sven and Heckwolf, Marlies and Kaeppler, Shawn M. and de Leon, Natalia and Spalding, Edgar P},
abstractNote = {Grass stalks architecturally support leaves and reproductive structures, functionally support the transport of water and nutrients, and are harvested for multiple agricultural uses. Research on these basic and applied aspects of grass stalks would benefit from improved capabilities for measuring internal anatomical features. In particular, methods suitable for phenotyping populations of plants are needed.},
doi = {10.1186/s13007-015-0070-x},
journal = {Plant Methods},
number = 1,
volume = 11,
place = {United States},
year = {Thu Apr 09 00:00:00 EDT 2015},
month = {Thu Apr 09 00:00:00 EDT 2015}
}
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Cited by: 28 works
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Figures / Tables:
Figure 1: The initial processing steps of maize stalk transections. A) Original, unprocessed images of four stalk transections. The two on the left are the same genotype. The two on the right are the same genotype but different from those on the left. B) Segmenting all non-background objects by amore »
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Genes controlling plant architecture
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Divergent selection for ester-linked diferulates in maize pith stalk tissues. Effects on cell wall composition and degradability
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Modifying crops to increase cell wall digestibility
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In Search of a Maize Ideotype for Cell Wall Enzymatic Degradability Using Histological and Biochemical Lignin Characterization
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- Journal of Agricultural and Food Chemistry, Vol. 53, Issue 15
Color Quantification of Stained Maize Stem Section Describes Lignin Spatial Distribution within the Whole Stem
journal, March 2013
- Zhang, Yu; Legay, Sylvain; Barrière, Yves
- Journal of Agricultural and Food Chemistry, Vol. 61, Issue 13
Structural development and stability of rice Oryza sativa L. var. Nerica 1
journal, August 2006
- Oladokun, M.
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Mathematical modelling of the cellular mechanics of plants
journal, July 2003
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Influence of cell size and cell wall Volume Fraction on Failure Properties of Potato and Carrot Tissue
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Vessel diameter-stem diameter scaling across woody angiosperms and the ecological causes of xylem vessel diameter variation
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Genome-wide association analysis of stalk biomass and anatomical traits in maize
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TIPS: a system for automated image-based phenotyping of maize tassels
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The elastic modulus for maize stems
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Phenotyping analysis of maize stem using micro-computed tomography at the elongation and tasseling stages
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Figures/Tables have been extracted from DOE-funded journal article accepted manuscripts.