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Title: Improved Three-Dimensional Reconstructions in Electron Ptychography through Defocus Series Measurements

Journal Article · · Microscopy and Microanalysis
ORCiD logo [1];  [1]; ORCiD logo [2];  [3];  [4];  [4];  [5]; ORCiD logo [5]; ORCiD logo [4];  [1];  [6];  [1]
  1. Helmholtz-Zentrum Berlin (HZB), (Germany)
  2. Univ. of Melbourne, VIC (Australia)
  3. University of California, Berkeley, CA (United States); Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States). National Center for Electron Microscopy, Molecular Foundry
  4. Monash Univ., Melbourne, VIC (Australia)
  5. National Institute for Materials Science (NIMS), Tsukuba (Japan)
  6. Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States). National Center for Electron Microscopy, Molecular Foundry

A detailed analysis of ptychography for three-dimensional (3D) phase reconstructions of thick specimens is performed. Here, we introduce multi-focus ptychography, which incorporates a 4D-STEM defocus series to enhance the quality of 3D reconstructions along the beam direction through a higher overdetermination ratio. This method is compared with established multi-slice ptychography techniques, such as conventional ptychography, regularized ptychography, and multi-mode ptychography. Additionally, we contrast multi-focus ptychography with an alternative method that uses virtual optical sectioning through a reconstructed scattering matrix (S-matrix), which offers more precise 3D structure information compared to conventional ptychography. Our findings from multiple 3D reconstructions based on simulated and experimental data demonstrate that multi-focus ptychography surpasses other techniques, particularly in accurately reconstructing the surfaces and interface regions of thick specimens.

Research Organization:
Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States)
Sponsoring Organization:
USDOE Office of Science (SC), Basic Energy Sciences (BES). Scientific User Facilities (SUF)
Grant/Contract Number:
AC02-05CH11231
OSTI ID:
2507172
Journal Information:
Microscopy and Microanalysis, Journal Name: Microscopy and Microanalysis Journal Issue: 1 Vol. 31; ISSN 1431-9276
Publisher:
Microscopy Society of America (MSA)Copyright Statement
Country of Publication:
United States
Language:
English

References (29)

Imaging individual atoms inside crystals with ADF-STEM journal September 2003
Practical aspects of diffractive imaging using an atomic-scale coherent electron probe journal October 2016
Analysis of depth-sectioning STEM for thick samples and 3D imaging journal December 2019
Advanced Phase Reconstruction Methods Enabled by Four-Dimensional Scanning Transmission Electron Microscopy journal August 2019
Scattering Matrix Determination in Crystalline Materials from 4D Scanning Transmission Electron Microscopy at a Single Defocus Value journal July 2021
Increasing Spatial Fidelity and SNR of 4D-STEM Using Multi-Frame Data Fusion journal August 2022
High Resolution Three-Dimensional Reconstructions in Electron Microscopy Through Multifocus Ptychography journal August 2022
A Three-Dimensional Reconstruction Algorithm for Scanning Transmission Electron Microscopy Data from a Single Sample Orientation journal June 2022
Low-Dose Aberration-Free Imaging of Li-Rich Cathode Materials at Various States of Charge Using Electron Ptychography journal September 2018
Three-dimensional structure determination from a single view journal December 2009
Electron tomography and holography in materials science journal April 2009
Atomic electrostatic maps of 1D channels in 2D semiconductors using 4D scanning transmission electron microscopy journal March 2019
U1 snRNP regulates cancer cell migration and invasion in vitro journal January 2020
Three-dimensional electron ptychography of organic–inorganic hybrid nanostructures journal August 2022
Solving complex nanostructures with ptychographic atomic electron tomography journal November 2023
Electron ptychography of 2D materials to deep sub-ångström resolution journal July 2018
Maximum-likelihood refinement for coherent diffractive imaging journal June 2012
Aberration-corrected ADF-STEM depth sectioning and prospects for reliable 3D imaging in S/TEM journal January 2009
Resolution of Virtual Depth Sectioning from Four-Dimensional Scanning Transmission Electron Microscopy journal July 2023
Three-dimensional structure of buried heterointerfaces revealed by multislice ptychography journal July 2024
Ptychographic atomic electron tomography: Towards three-dimensional imaging of individual light atoms in materials journal November 2020
Electron knock-on damage in hexagonal boron nitride monolayers journal September 2010
VESTA 3 for three-dimensional visualization of crystal, volumetric and morphology data journal October 2011
Electron ptychography achieves atomic-resolution limits set by lattice vibrations journal May 2021
Three-dimensional inhomogeneity of zeolite structure and composition revealed by electron ptychography journal May 2023
Smart Align—a new tool for robust non-rigid registration of scanning microscope data journal July 2015
X-ray ptychography with extended depth of field journal January 2016
Overcoming information reduced data and experimentally uncertain parameters in ptychography with regularized optimization journal January 2020
Relaxation of the Crowther criterion in multislice tomography journal January 2018