Classifying Genetic Interactions Using an HIV Experimental Study

Silva, M S; Huckleberry, S

doi:10.1101/2024.05.13.594050

Title: Classifying Genetic Interactions Using an HIV Experimental Study

Journal Article · 31 March 2024 · MIT Undergraduate Research Journal

DOI: https://doi.org/10.1101/2024.05.13.594050 · OSTI ID:2499864

Silva, M S ^[1]; Huckleberry, S ^[1]

Lawrence Livermore National Laboratory

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Research Organization:: Lawrence Livermore National Laboratory (LLNL), Livermore, CA (United States)

Sponsoring Organization:: USDOE National Nuclear Security Administration (NNSA)

Grant/Contract Number:: AC52-07NA27344

OSTI ID:: 2499864

Report Number(s):: LLNL-JRNL-860169; 1091152

Journal Information:: MIT Undergraduate Research Journal, Journal Name: MIT Undergraduate Research Journal; ISSN 1091152

Country of Publication:: United States

Language:: English

References (8)

A Quantitative Genetic Interaction Map of HIV Infection Gordon, David E.; Watson, Ariane; Roguev, Assen Molecular Cell, Vol. 78, Issue 2 https://doi.org/10.1016/j.molcel.2020.02.004	journal	April 2020
Accurate prediction of virus-host protein-protein interactions via a Siamese neural network using deep protein sequence embeddings Madan, Sumit; Demina, Victoria; Stapf, Marcus Patterns, Vol. 3, Issue 9 https://doi.org/10.1016/j.patter.2022.100551	journal	September 2022
Transfer learning enables predictions in network biology Theodoris, Christina V.; Xiao, Ling; Chopra, Anant Nature, Vol. 618, Issue 7965 https://doi.org/10.1038/s41586-023-06139-9	journal	May 2023
Developing therapeutic approaches for twenty-first-century emerging infectious viral diseases Meganck, Rita M.; Baric, Ralph S. Nature Medicine, Vol. 27, Issue 3 https://doi.org/10.1038/s41591-021-01282-0	journal	March 2021
The scalable precision medicine open knowledge engine (SPOKE): a massive knowledge graph of biomedical information Morris, John H.; Soman, Karthik; Akbas, Rabia E. Bioinformatics, Vol. 39, Issue 2 https://doi.org/10.1093/bioinformatics/btad080	journal	February 2023
Single-Shot Image Recognition Using Siamese Neural Networks Malhotra, Abhiraj 2023 3rd International Conference on Advance Computing and Innovative Technologies in Engineering (ICACITE) https://doi.org/10.1109/ICACITE57410.2023.10182466	conference	May 2023
Fast and Accurate Network Embeddings via Very Sparse Random Projection Chen, Haochen; Sultan, Syed Fahad; Tian, Yingtao Proceedings of the 28th ACM International Conference on Information and Knowledge Management https://doi.org/10.1145/3357384.3357879	conference	November 2019
Systematic integration of biomedical knowledge prioritizes drugs for repurposing Himmelstein, Daniel Scott; Lizee, Antoine; Hessler, Christine eLife, Vol. 6 https://doi.org/10.7554/eLife.26726	journal	September 2017

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