Temporal dynamics of Escherichia coli O157:H7 transcriptomes on the surface of shredded lettuce

Solaiman, Sultana; Jayeola, Victor; Hines, Ian; Meeks, Ellie; Zheng, Jie; Hoffmann, Maria

doi:10.1016/j.foodcont.2024.111032

Title: Temporal dynamics of Escherichia coli O157:H7 transcriptomes on the surface of shredded lettuce

Journal Article · 01 April 2025 · Food Control

DOI: https://doi.org/10.1016/j.foodcont.2024.111032 · OSTI ID:2477850

; Jayeola, Victor; Hines, Ian; Meeks, Ellie;

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Sponsoring Organization:: USDOE

OSTI ID:: 2477850

Journal Information:: Food Control, Journal Name: Food Control Journal Issue: C Vol. 170; ISSN 0956-7135

Publisher:: ElsevierCopyright Statement

Country of Publication:: United Kingdom

Language:: English

References (47)

Regulation of arginine biosynthesis, catabolism and transport in Escherichia coli Charlier, Daniel; Bervoets, Indra Amino Acids, Vol. 51, Issue 8 https://doi.org/10.1007/s00726-019-02757-8	journal	July 2019
Alterations of the phylloepiphytic bacterial community associated with interactions of Escherichia coli O157:H7 during storage of packaged spinach at refrigeration temperatures Lopez-Velasco, Gabriela; Davis, Marjorie; Boyer, Renee R. Food Microbiology, Vol. 27, Issue 4 https://doi.org/10.1016/j.fm.2009.12.010	journal	June 2010
Transcriptome sequencing of Salmonella enterica serovar Enteritidis under desiccation and starvation stress in peanut oil Deng, Xiangyu; Li, Zengxin; Zhang, Wei Food Microbiology, Vol. 30, Issue 1 https://doi.org/10.1016/j.fm.2011.11.001	journal	May 2012
Transcriptional and functional responses of Escherichia coli O157:H7 growing in the lettuce rhizoplane Hou, Zhe; Fink, Ryan C.; Sugawara, Masayuki Food Microbiology, Vol. 35, Issue 2 https://doi.org/10.1016/j.fm.2013.03.002	journal	September 2013
The influence of different lactic acid bacteria on sourdough flavor and a deep insight into sourdough fermentation through RNA sequencing Liu, Tongjie; Li, Yang; Yang, Yuanyi Food Chemistry, Vol. 307 https://doi.org/10.1016/j.foodchem.2019.125529	journal	March 2020
Transcriptomics: A powerful tool to evaluate the behavior of foodborne pathogens in the food production chain Lamas, Alexandre; Regal, Patricia; Vázquez, Beatriz Food Research International, Vol. 125 https://doi.org/10.1016/j.foodres.2019.108543	journal	November 2019
Population dynamics of Escherichia coli inoculated by irrigation into the phyllosphere of spinach grown under commercial production conditions Wood, J. D.; Bezanson, G. S.; Gordon, R. J. International Journal of Food Microbiology, Vol. 143, Issue 3 https://doi.org/10.1016/j.ijfoodmicro.2010.08.022	journal	October 2010
Ability of Shiga toxigenic Escherichia coli to survive within dry-surface biofilms and transfer to fresh lettuce Adator, Emelia Hornam; Cheng, Meining; Holley, Rick International Journal of Food Microbiology, Vol. 269 https://doi.org/10.1016/j.ijfoodmicro.2018.01.014	journal	March 2018
Fresh produce sanitization by combination of gaseous ozone and liquid sanitizer Pyatkovskyy, Taras; Shynkaryk, Mykola; Yousef, Ahmed Journal of Food Engineering, Vol. 210 https://doi.org/10.1016/j.jfoodeng.2017.03.031	journal	October 2017
Metabolic adaptation of Escherichia coli to long-term exposure to salt stress Arense, Paula; Bernal, Vicente; Iborra, José L. Process Biochemistry, Vol. 45, Issue 9 https://doi.org/10.1016/j.procbio.2010.05.022	journal	September 2010
The growing burden of foodborne outbreaks due to contaminated fresh produce: risks and opportunities Lynch, M. F.; Tauxe, R. V.; Hedberg, C. W. Epidemiology and Infection, Vol. 137, Issue 3 https://doi.org/10.1017/S0950268808001969	journal	February 2009
Produce-associated foodborne disease outbreaks, USA, 1998–2013 Bennett, S. D.; Sodha, S. V.; Ayers, T. L. Epidemiology and Infection, Vol. 146, Issue 11 https://doi.org/10.1017/S0950268818001620	journal	June 2018
Salmon provides fast and bias-aware quantification of transcript expression Patro, Rob; Duggal, Geet; Love, Michael I. Nature Methods, Vol. 14, Issue 4 https://doi.org/10.1038/nmeth.4197	journal	March 2017
Transcript analysis reveals an extended regulon and the importance of protein–protein co-operativity for the Escherichia coli methionine repressor Marincs, Ferenc; Manfield, Iain W.; Stead, Jonathan A. Biochemical Journal, Vol. 396, Issue 2 https://doi.org/10.1042/BJ20060021	journal	May 2006
Maladaptive DNA repair is the ultimate contributor to the death of trimethoprim-treated cells under aerobic and anaerobic conditions Giroux, Xavier; Su, Wei-Lin; Bredeche, Marie-Florence Proceedings of the National Academy of Sciences, Vol. 114, Issue 43 https://doi.org/10.1073/pnas.1706236114	journal	October 2017
DAVID: a web server for functional enrichment analysis and functional annotation of gene lists (2021 update) Sherman, Brad T.; Hao, Ming; Qiu, Ju Nucleic Acids Research, Vol. 50, Issue W1 https://doi.org/10.1093/nar/gkac194	journal	March 2022
Salmonella,a cross-kingdom pathogen infecting humans and plants Hernández-Reyes, Casandra; Schikora, Adam FEMS Microbiology Letters, Vol. 343, Issue 1 https://doi.org/10.1111/1574-6968.12127	journal	April 2013
Ozone and Chlorine Treatment of Minimally Processed Lettuce Garcia, A.; Mount, J. R.; Davidson, P. M. Journal of Food Science, Vol. 68, Issue 9 https://doi.org/10.1111/j.1365-2621.2003.tb05799.x	journal	November 2003
Molecular biology of surface colonization by Listeria monocytogenes: an additional facet of an opportunistic Gram-positive foodborne pathogen: Molecular mechanisms of L. monocytogenes biofilm formation Renier, Sandra; Hébraud, Michel; Desvaux, Mickaël Environmental Microbiology, Vol. 13, Issue 4 https://doi.org/10.1111/j.1462-2920.2010.02378.x	journal	November 2010
Longitudinal Assessment of the Dynamics of Escherichia coli, Total Coliforms, Enterococcus spp., and Aeromonas spp. in Alternative Irrigation Water Sources: a CONSERVE Study Solaiman, Sultana; Allard, Sarah M.; Callahan, Mary Theresa Applied and Environmental Microbiology, Vol. 86, Issue 20 https://doi.org/10.1128/AEM.00342-20	journal	October 2020
Commensal Effect of Pectate Lyases Secreted from Dickeya dadantii on Proliferation of Escherichia coli O157:H7 EDL933 on Lettuce Leaves Yamazaki, Akihiro; Li, Jin; Hutchins, William C. Applied and Environmental Microbiology, Vol. 77, Issue 1 https://doi.org/10.1128/AEM.01079-10	journal	January 2011
Prevalence of Shiga Toxin-Producing Escherichia coli stx ₁ , stx ₂ , eaeA , and rfbE Genes and Survival of E. coli O157:H7 in Manure from Organic and Low-Input Conventional Dairy Farms Franz, Eelco; Klerks, Michel M.; De Vos, Oscar J. Applied and Environmental Microbiology, Vol. 73, Issue 7 https://doi.org/10.1128/AEM.01950-06	journal	April 2007
Induction of Viable but Nonculturable Escherichia coli O157:H7 in the Phyllosphere of Lettuce: a Food Safety Risk Factor Dinu, Laura-Dorina; Bach, Susan Applied and Environmental Microbiology, Vol. 77, Issue 23 https://doi.org/10.1128/AEM.05020-11	journal	December 2011
Transcriptional Responses of Escherichia coli K-12 and O157:H7 Associated with Lettuce Leaves Fink, Ryan C.; Black, Elaine P.; Hou, Zhe Applied and Environmental Microbiology, Vol. 78, Issue 6 https://doi.org/10.1128/AEM.07454-11	journal	March 2012
YliH (BssR) and YceP (BssS) Regulate Escherichia coli K-12 Biofilm Formation by Influencing Cell Signaling Domka, Joanna; Lee, Jintae; Wood, Thomas K. Applied and Environmental Microbiology, Vol. 72, Issue 4 https://doi.org/10.1128/AEM.72.4.2449-2459.2006	journal	April 2006
Role of uhp genes in expression of the Escherichia coli sugar-phosphate transport system Weston, L. A.; Kadner, R. J. Journal of Bacteriology, Vol. 170, Issue 8 https://doi.org/10.1128/jb.170.8.3375-3383.1988	journal	August 1988
Transcriptome Profiling of the Endophyte Burkholderia phytofirmans PsJN Indicates Sensing of the Plant Environment and Drought Stress Sheibani-Tezerji, Raheleh; Rattei, Thomas; Sessitsch, Angela mBio, Vol. 6, Issue 5 https://doi.org/10.1128/mBio.00621-15	journal	September 2015
Survival ofEscherichia coliO157:H7 in soil and on lettuce after soil fumigation Ibekwe, A. Mark; Grieve, Catherine M.; Yang, Ching-Hong Canadian Journal of Microbiology, Vol. 53, Issue 5 https://doi.org/10.1139/W07-003	journal	May 2007
Gene Expression during Survival ofEscherichia coliO157:H7 in Soil and Water Duffitt, Ashley D.; Reber, Robert T.; Whipple, Andrew International Journal of Microbiology, Vol. 2011 https://doi.org/10.1155/2011/340506	journal	January 2011
Effects of Variety and Postharvest Handling Practices on Microbial Population at Different Stages of the Value Chain of Fresh Tomato(Solanum lycopersicum)in Western Terai of Nepal Khadka, Ram B.; Marasini, Madan; Rawal, Ranjana BioMed Research International, Vol. 2017 https://doi.org/10.1155/2017/7148076	journal	January 2017
Comparison of strand-specific transcriptomes of enterohemorrhagic Escherichia coli O157:H7 EDL933 (EHEC) under eleven different environmental conditions including radish sprouts and cattle feces Landstorfer, Richard; Simon, Svenja; Schober, Steffen BMC Genomics, Vol. 15, Issue 1 https://doi.org/10.1186/1471-2164-15-353	journal	May 2014
SAMSA2: a standalone metatranscriptome analysis pipeline Westreich, Samuel T.; Treiber, Michelle L.; Mills, David A. BMC Bioinformatics, Vol. 19, Issue 1 https://doi.org/10.1186/s12859-018-2189-z	journal	May 2018
Conversion of methionine biosynthesis in Escherichia coli from trans- to direct-sulfurylation enhances extracellular methionine levels Gruzdev, Nadya; Hacham, Yael; Haviv, Hadar Microbial Cell Factories, Vol. 22, Issue 1 https://doi.org/10.1186/s12934-023-02150-x	journal	August 2023
To trade in the field: the molecular determinants of arbuscular mycorrhiza nutrient exchange Salvioli di Fossalunga, Alessandra; Novero, Mara Chemical and Biological Technologies in Agriculture, Vol. 6, Issue 1 https://doi.org/10.1186/s40538-019-0150-7	journal	June 2019
Seasonality, shelf life and storage atmosphere are main drivers of the microbiome and E. coli O157:H7 colonization of post-harvest lettuce cultivated in a major production area in California Leonard, Susan R.; Simko, Ivan; Mammel, Mark K. Environmental Microbiome, Vol. 16, Issue 1 https://doi.org/10.1186/s40793-021-00393-y	journal	December 2021
Persistence of Escherichia coli O157:H7 and Its Mutants in Soils Ma, Jincai; Ibekwe, A. Mark; Yi, Xuan PLoS ONE, Vol. 6, Issue 8 https://doi.org/10.1371/journal.pone.0023191	journal	August 2011
Plant-Adapted Escherichia coli Show Increased Lettuce Colonizing Ability, Resistance to Oxidative Stress and Chemotactic Response Dublan, Maria de los Angeles; Ortiz-Marquez, Juan Cesar Federico; Lett, Lina PLoS ONE, Vol. 9, Issue 10 https://doi.org/10.1371/journal.pone.0110416	journal	October 2014
Escherichia coli O157: Insights into the adaptive stress physiology and the influence of stressors on epidemiology and ecology of this human pathogen Vidovic, Sinisa; Korber, Darren R. Critical Reviews in Microbiology, Vol. 42, Issue 1 https://doi.org/10.3109/1040841X.2014.889654	journal	March 2014
Multi-Omic Analysis to Characterize Metabolic Adaptation of the E. coli Lipidome in Response to Environmental Stress Kralj, Thomas; Nuske, Madison; Hofferek, Vinzenz Metabolites, Vol. 12, Issue 2 https://doi.org/10.3390/metabo12020171	journal	February 2022
Characterization of the BolA Homolog IbaG: A New Gene Involved in Acid Resistance Guinote, Ines Batista Journal of Microbiology and Biotechnology, Vol. 22, Issue 4 https://doi.org/10.4014/jmb.1107.07037	journal	April 2012
Cross-Contamination of Lettuce with Escherichia coli O157:H7 Wachtel, Marian R.; Charkowski, Amy O. Journal of Food Protection, Vol. 65, Issue 3 https://doi.org/10.4315/0362-028X-65.3.465	journal	March 2002
Influence of Curli Expression by Escherichia coli O157:H7 on the Cell's Overall Hydrophobicity, Charge, and Ability To Attach to Lettuce Boyer, Renee R.; Sumner, Susan S.; Williams, Robert C. Journal of Food Protection, Vol. 70, Issue 6 https://doi.org/10.4315/0362-028X-70.6.1339	journal	June 2007
Transfer of Escherichia coli O157:H7 to Iceberg Lettuce via Simulated Field Coring Taormina, Peter J.; Beuchat, Larry R.; Erickson, Marilyn C. Journal of Food Protection, Vol. 72, Issue 3 https://doi.org/10.4315/0362-028X-72.3.465	journal	March 2009
Thermal Inactivation of Acid, Cold, Heat, Starvation, and Desiccation Stress-Adapted Escherichia coli O157:H7 in Moisture-Enhanced Nonintact Beef Shen, Cangliang; Geornaras, Ifigenia; Belk, Keith E. Journal of Food Protection, Vol. 74, Issue 4 https://doi.org/10.4315/0362-028X.JFP-10-430	journal	April 2011
Growth of Escherichia coli O157:H7 and Listeria monocytogenes in Packaged Fresh-Cut Romaine Mix at Fluctuating Temperatures during Commercial Transport, Retail Storage, and Display Zeng, Wenting; Vorst, Keith; Brown, Wyatt Journal of Food Protection, Vol. 77, Issue 2 https://doi.org/10.4315/0362-028X.JFP-13-117	journal	February 2014
Transfer of Escherichia coli O157:H7 from Simulated Wildlife Scat onto Romaine Lettuce during Foliar Irrigation Atwill, Edward R.; Chase, Jennifer A.; Oryang, David Journal of Food Protection, Vol. 78, Issue 2 https://doi.org/10.4315/0362-028X.JFP-14-277	journal	February 2015
Survival of Escherichia coli on Lettuce under Field Conditions Encountered in the Northeastern United States Weller, Daniel L.; Kovac, Jasna; Roof, Sherry Journal of Food Protection, Vol. 80, Issue 7 https://doi.org/10.4315/0362-028X.JFP-16-419	journal	July 2017

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