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UCSF ChimeraX: Meeting modern challenges in visualization and analysis: UCSF ChimeraX Visualization System
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journal
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September 2017 |
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UCSF ChimeraX : Structure visualization for researchers, educators, and developers
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journal
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October 2020 |
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Using Dali for Protein Structure Comparison
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book
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January 2020 |
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Mechanism and structure of the bacterial type IV secretion systems
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journal
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August 2014 |
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M. tuberculosis and M. leprae Translocate from the Phagolysosome to the Cytosol in Myeloid Cells
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journal
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June 2007 |
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Substrates Control Multimerization and Activation of the Multi-Domain ATPase Motor of Type VII Secretion
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journal
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April 2015 |
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A novel family of toxin/antitoxin proteins in Bacillus species
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journal
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December 2011 |
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Inference of Macromolecular Assemblies from Crystalline State
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journal
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September 2007 |
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Structure of Staphylococcus aureus EsxA Suggests a Contribution to Virulence by Action as a Transport Chaperone and/or Adaptor Protein
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journal
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November 2008 |
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Structure of EspB from the ESX-1 Type VII Secretion System and Insights into its Export Mechanism
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journal
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March 2015 |
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Structure of the Extracellular Region of the Bacterial Type VIIb Secretion System Subunit EsaA
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journal
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February 2021 |
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Contact-Dependent Interbacterial Antagonism Mediated by Protein Secretion Machines
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journal
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May 2020 |
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The various and varying roles of specific chaperones in type III secretion systems
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journal
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February 2003 |
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The type VII secretion system of Staphylococcus aureus secretes a nuclease toxin that targets competitor bacteria
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journal
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October 2016 |
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Tricine–SDS-PAGE
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journal
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May 2006 |
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Type VII secretion — mycobacteria show the way
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journal
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November 2007 |
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A type VI secretion system effector delivery mechanism dependent on PAAR and a chaperone–co-chaperone complex
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journal
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April 2018 |
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Type VII secretion systems: structure, functions and transport models
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journal
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May 2021 |
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Architecture of the mycobacterial type VII secretion system
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journal
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October 2019 |
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Structure and dynamics of a mycobacterial type VII secretion system
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journal
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May 2021 |
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Highly accurate protein structure prediction with AlphaFold
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journal
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July 2021 |
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ColabFold: making protein folding accessible to all
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journal
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May 2022 |
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Structure and function of the complex formed by the tuberculosis virulence factors CFP-10 and ESAT-6
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journal
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June 2005 |
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EsxA and EsxB are secreted by an ESAT-6-like system that is required for the pathogenesis of Staphylococcus aureus infections
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journal
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January 2005 |
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Toward the structural genomics of complexes: Crystal structure of a PE/PPE protein complex from Mycobacterium tuberculosis
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journal
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May 2006 |
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General secretion signal for the mycobacterial type VII secretion pathway
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journal
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June 2012 |
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Structure of a PE-PPE-EspG complex from Mycobacterium tuberculosis reveals molecular specificity of ESX protein secretion
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journal
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October 2014 |
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A membrane-depolarizing toxin substrate of the Staphylococcus aureus type VII secretion system mediates intraspecies competition
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journal
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August 2020 |
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Specific Chaperones for the Type VII Protein Secretion Pathway
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journal
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July 2012 |
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Functional Analysis of Early Secreted Antigenic Target-6, the Dominant T-cell Antigen of Mycobacterium tuberculosis, Reveals Key Residues Involved in Secretion, Complex Formation, Virulence, and Immunogenicity
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journal
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October 2005 |
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Modification of a PE/PPE substrate pair reroutes an Esx substrate pair from the mycobacterial ESX-1 type VII secretion system to the ESX-5 system
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journal
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May 2020 |
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PE5–PPE4–EspG3 heterotrimer structure from mycobacterial ESX-3 secretion system gives insight into cognate substrate recognition by ESX systems
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journal
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September 2020 |
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AL2CO: calculation of positional conservation in a protein sequence alignment
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journal
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August 2001 |
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Logomaker: beautiful sequence logos in Python
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journal
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December 2019 |
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MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
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journal
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January 2013 |
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PDBsum: summaries and analyses of PDB structures
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journal
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January 2001 |
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MOLPROBITY: structure validation and all-atom contact analysis for nucleic acids and their complexes
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journal
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July 2004 |
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The M-Coffee web server: a meta-method for computing multiple sequence alignments by combining alternative alignment methods
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journal
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May 2007 |
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Deciphering key features in protein structures with the new ENDscript server
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journal
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April 2014 |
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HMMER web server: 2015 update
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journal
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May 2015 |
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The PSIPRED Protein Analysis Workbench: 20 years on
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journal
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April 2019 |
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Extreme genetic diversity in the type VII secretion system of Listeria monocytogenes suggests a role in bacterial antagonism
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journal
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March 2021 |
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HKL -3000: the integration of data reduction and structure solution – from diffraction images to an initial model in minutes
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journal
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July 2006 |
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The Buccaneer software for automated model building. 1. Tracing protein chains
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journal
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August 2006 |
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Experimental phasing with SHELXC / D / E : combining chain tracing with density modification
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journal
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March 2010 |
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Features and development of Coot
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journal
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March 2010 |
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Overview of the CCP 4 suite and current developments
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journal
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March 2011 |
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REFMAC 5 for the refinement of macromolecular crystal structures
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journal
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March 2011 |
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Towards automated crystallographic structure refinement with phenix.refine
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journal
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March 2012 |
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EsaC substrate for the ESAT-6 secretion pathway and its role in persistent infections of Staphylococcus aureus
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journal
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August 2008 |
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Gene Cloning and Characterization of PepC, a Cysteine Aminopeptidase from Streptococcus thermophilus, with sequence Similarity to the Eucaryotic Bleomycin Hydrolase
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journal
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September 1994 |
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ESX‐1‐mediated translocation to the cytosol controls virulence of mycobacteria
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journal
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April 2012 |
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Secretion of atypical protein substrates by the ESAT‐6 Secretion System of Staphylococcus aureus
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journal
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October 2013 |
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Structure of the M ycobacterium tuberculosis type VII secretion system chaperone EspG 5 in complex with PE25-PPE41 dimer : Type VII secretion chaperone and PE-PPE dimer
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journal
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September 2014 |
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New insights into the mycobacterial PE and PPE proteins provide a framework for future research
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journal
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November 2019 |
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Bacterial type VII secretion: An important player in host‐microbe and microbe‐microbe interactions
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journal
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January 2021 |
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Structure of the mycobacterial ESX-5 type VII secretion system pore complex
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journal
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June 2021 |
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C-Terminal Signal Sequence Promotes Virulence Factor Secretion in Mycobacterium tuberculosis
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journal
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September 2006 |
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Linking Crystallographic Model and Data Quality
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journal
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May 2012 |
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Intercellular communication and conjugation are mediated by ESX secretion systems in mycobacteria
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journal
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October 2016 |
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Characterization of the Pathogenicity of Streptococcus intermedius TYG1620 Isolated from a Human Brain Abscess Based on the Complete Genome Sequence with Transcriptome Analysis and Transposon Mutagenesis in a Murine Subcutaneous Abscess Model
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journal
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February 2017 |
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Substrate Interaction with the EssC Coupling Protein of the Type VIIb Secretion System
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journal
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March 2020 |
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Bacterial Secretion Systems: An Overview
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journal
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February 2016 |
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The Type VII Secretion System ofStaphylococcus
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journal
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October 2021 |
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Skylign: a tool for creating informative, interactive logos representing sequence alignments and profile hidden Markov models
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journal
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January 2014 |
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Polymorphic toxin systems: Comprehensive characterization of trafficking modes, processing, mechanisms of action, immunity and ecology using comparative genomics
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journal
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January 2012 |
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Phage infection and sub-lethal antibiotic exposure mediate Enterococcus faecalis type VII secretion system dependent inhibition of bystander bacteria
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journal
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January 2021 |
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Diverse LXG toxin and antitoxin systems specifically mediate intraspecies competition in Bacillus subtilis biofilms
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journal
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July 2021 |
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The ESX-3 Secretion System Is Necessary for Iron and Zinc Homeostasis in Mycobacterium tuberculosis
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journal
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October 2013 |
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WXG100 Protein Superfamily Consists of Three Subfamilies and Exhibits an α-Helical C-Terminal Conserved Residue Pattern
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journal
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February 2014 |
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A type VII secretion system in Group B Streptococcus mediates cytotoxicity and virulence
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journal
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December 2021 |
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Multitasking SecB chaperones in bacteria
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journal
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December 2014 |
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A broadly distributed toxin family mediates contact-dependent antagonism between gram-positive bacteria
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journal
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July 2017 |
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The structure of the endogenous ESX-3 secretion system
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journal
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December 2019 |
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Structural basis for effector transmembrane domain recognition by type VI secretion system chaperones
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journal
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December 2020 |