Crystal structure of hetero hexameric 11S seed storage protein of hazelnut

Guo, Feng; Zhang, Yuzhu; Howard, Andrew; Xu, Yixiang

doi:10.1016/j.plaphy.2024.108653

Title: Crystal structure of hetero hexameric 11S seed storage protein of hazelnut

Journal Article · 01 May 2024 · Plant Physiology and Biochemistry

DOI: https://doi.org/10.1016/j.plaphy.2024.108653 · OSTI ID:2369798

;

; Howard, Andrew; Xu, Yixiang

Not Available

View Accepted Manuscript (Publisher)

This content will become publicly available on April 24, 2026

Cite

Export

Save

Sponsoring Organization:: USDOE Office of Science (SC), Basic Energy Sciences (BES)

Grant/Contract Number:: W-31109-ENG-38

OSTI ID:: 2369798

Journal Information:: Plant Physiology and Biochemistry, Journal Name: Plant Physiology and Biochemistry Journal Issue: C Vol. 210; ISSN 0981-9428

Publisher:: ElsevierCopyright Statement

Country of Publication:: France

Language:: English

References (38)

PDBsum: Structural summaries of PDB entries Laskowski, Roman A.; Jabłońska, Jagoda; Pravda, Lukáš Protein Science, Vol. 27, Issue 1 https://doi.org/10.1002/pro.3289	journal	October 2017
Structure validation by Cα geometry: ϕ,ψ and Cβ deviation Lovell, Simon C.; Davis, Ian W.; Arendall, W. Bryan Proteins: Structure, Function, and Bioinformatics, Vol. 50, Issue 3 https://doi.org/10.1002/prot.10286	journal	January 2003
MUSTANG: A multiple structural alignment algorithm Konagurthu, Arun S.; Whisstock, James C.; Stuckey, Peter J. Proteins: Structure, Function, and Bioinformatics, Vol. 64, Issue 3 https://doi.org/10.1002/prot.20921	journal	May 2006
Crystal Structure of Soybean Proglycinin A1aB1b Homotrimer Adachi, Motoyasu; Takenaka, Yasuyuki; Gidamis, Andrew B. Journal of Molecular Biology, Vol. 305, Issue 2 https://doi.org/10.1006/jmbi.2000.4310	journal	January 2001
Molecular characterization of cDNAs corresponding to genes expressed during almond (Prunus amygdalus Batsch) seed development Garcia-Mas, Jordi; Messeguer, Ramon; Ar�s, Pere Plant Molecular Biology, Vol. 27, Issue 1 https://doi.org/10.1007/BF00019192	journal	January 1995
Partial characterization of the acidic and basic polypeptides of glycinin. Moreira, M. A.; Hermodson, M. A.; Larkins, B. A. Journal of Biological Chemistry, Vol. 254, Issue 19 https://doi.org/10.1016/S0021-9258(19)83605-0	journal	October 1979
[20] Processing of X-ray diffraction data collected in oscillation mode Otwinowski, Zbyszek; Minor, Wladek Macromolecular Crystallography Part A, 307-326 https://doi.org/10.1016/S0076-6879(97)76066-X	book	January 1997
Sensitization profiles to hazelnut allergens across the United States Valcour, Andre; Lidholm, Jonas; Borres, Magnus P. Annals of Allergy, Asthma & Immunology, Vol. 122, Issue 1 https://doi.org/10.1016/j.anai.2018.09.466	journal	January 2019
Conservation and divergence on plant seed 11S globulins based on crystal structures Tandang-Silvas, Mary Rose G.; Fukuda, Takako; Fukuda, Chisato Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics, Vol. 1804, Issue 7 https://doi.org/10.1016/j.bbapap.2010.02.016	journal	July 2010
Divergent structures and functions of the Cupin proteins in plants Hu, Fei; Ye, Ziyi; Dong, Kui International Journal of Biological Macromolecules, Vol. 242 https://doi.org/10.1016/j.ijbiomac.2023.124791	journal	July 2023
Inference of Macromolecular Assemblies from Crystalline State Krissinel, Evgeny; Henrick, Kim Journal of Molecular Biology, Vol. 372, Issue 3 https://doi.org/10.1016/j.jmb.2007.05.022	journal	September 2007
Crystal structure of Ara h 3, a major allergen in peanut Jin, Tengchuan; Guo, Feng; Chen, Yu-wei Molecular Immunology, Vol. 46, Issue 8-9 https://doi.org/10.1016/j.molimm.2009.01.023	journal	May 2009
Crystal structure determination and analysis of 11S coconut allergen: Cocosin Vajravijayan, S.; Nandhagopal, N.; Gunasekaran, K. Molecular Immunology, Vol. 92 https://doi.org/10.1016/j.molimm.2017.10.018	journal	December 2017
Cupins: the most functionally diverse protein superfamily? Dunwell, Jim M.; Purvis, Alan; Khuri, Sawsan Phytochemistry, Vol. 65, Issue 1 https://doi.org/10.1016/j.phytochem.2003.08.016	journal	January 2004
Isolation of peanut genes encoding arachins and conglutins by expressed sequence tags Yan, Yong-Sheng; Lin, Xiao-Dong; Zhang, Yi-Shun Plant Science, Vol. 169, Issue 2 https://doi.org/10.1016/j.plantsci.2005.04.010	journal	August 2005
Crystal Structure of Cocosin, A Potential Food Allergen from Coconut (Cocos nucifera) Jin, Tengchuan; Wang, Cheng; Zhang, Caiying Journal of Agricultural and Food Chemistry, Vol. 65, Issue 34 https://doi.org/10.1021/acs.jafc.7b02252	journal	July 2017
Purification, Crystallization and Preliminary X-ray Characterization of Prunin-1, a Major Component of the Almond ( Prunus dulcis ) Allergen Amandin Albillos, Silvia M.; Jin, Tengchuan; Howard, Andrew Journal of Agricultural and Food Chemistry, Vol. 56, Issue 13 https://doi.org/10.1021/jf800529k	journal	June 2008
Crystal Structure of Prunin-1, a Major Component of the Almond ( Prunus dulcis ) Allergen Amandin Jin, Tengchuan; Albillos, Silvia M.; Guo, Feng Journal of Agricultural and Food Chemistry, Vol. 57, Issue 18 https://doi.org/10.1021/jf9017355	journal	September 2009
A novel function for globulin in sequestering plant hormone: Crystal structure of Wrightia tinctoria 11S globulin in complex with auxin Kumar, Pramod; Kesari, Pooja; Dhindwal, Sonali Scientific Reports, Vol. 7, Issue 1 https://doi.org/10.1038/s41598-017-04518-7	journal	July 2017
Crystal structures of recombinant and native soybean β‐conglycinin β homotrimers Maruyama, Nobuyuki; Adachi, Motoyasu; Takahashi, Koji European Journal of Biochemistry, Vol. 268, Issue 12 https://doi.org/10.1046/j.1432-1327.2001.02268.x	journal	June 2001
Crystal structure of soybean 11S globulin: Glycinin A3B4 homohexamer Adachi, Motoyasu; Kanamori, Jiro; Masuda, Taro Proceedings of the National Academy of Sciences, Vol. 100, Issue 12 https://doi.org/10.1073/pnas.0832158100	journal	May 2003
Cupins: A New Superfamily of Functionally Diverse Proteins that Include Germins and Plant Storage Proteins Dunwell, Jim M. Biotechnology and Genetic Engineering Reviews, Vol. 15, Issue 1 https://doi.org/10.1080/02648725.1998.10647950	journal	April 1998
Peanut allergy: risk factors, immune mechanisms, and best practices for oral immunotherapy success Tirumalasetty, Jyothi; Barshow, Suzanne; Kost, Laurie Expert Review of Clinical Immunology, Vol. 19, Issue 7 https://doi.org/10.1080/1744666X.2023.2209318	journal	May 2023
Clustal W and Clustal X version 2.0 Larkin, M. A.; Blackshields, G.; Brown, N. P. Bioinformatics, Vol. 23, Issue 21, p. 2947-2948 https://doi.org/10.1093/bioinformatics/btm404	journal	September 2007
Endomembrane mediated-trafficking of seed storage proteins: from Arabidopsis to cereal crops Zheng, Ping; Zheng, Chunyan; Otegui, Marisa S. Journal of Experimental Botany, Vol. 73, Issue 5 https://doi.org/10.1093/jxb/erab519	journal	November 2021
Multiple Vacuolar Sorting Determinants Exist in Soybean 11S Globulin Maruyama, Nobuyuki; Mun, Leong Ching; Tatsuhara, Miyuki The Plant Cell, Vol. 18, Issue 5 https://doi.org/10.1105/tpc.105.036376	journal	April 2006
CHAINSAW : a program for mutating pdb files used as templates in molecular replacement Stein, Norman Journal of Applied Crystallography, Vol. 41, Issue 3 https://doi.org/10.1107/S0021889808006985	journal	April 2008
PROCHECK: a program to check the stereochemical quality of protein structures Laskowski, R. A.; MacArthur, M. W.; Moss, D. S. Journal of Applied Crystallography, Vol. 26, Issue 2 https://doi.org/10.1107/S0021889892009944	journal	April 1993
PHENIX: a comprehensive Python-based system for macromolecular structure solution Adams, Paul D.; Afonine, Pavel V.; Bunkóczi, Gábor Acta Crystallographica Section D Biological Crystallography, Vol. 66, Issue 2, p. 213-221 https://doi.org/10.1107/S0907444909052925	journal	January 2010
Purification, crystallization and initial crystallographic characterization of peanut major allergen Ara h 3 Jin, Tengchuan; Howard, Andrew; Zhang, Yu-Zhu Acta Crystallographica Section F Structural Biology and Crystallization Communications, Vol. 63, Issue 10 https://doi.org/10.1107/S1744309107041176	journal	September 2007
Purification and crystallization of Cor a 9, a major hazelnut allergen Guo, Feng; Kothary, Mahendra H.; Wang, Yang Acta Crystallographica Section F Structural Biology and Crystallization Communications, Vol. 65, Issue 1 https://doi.org/10.1107/S1744309108039894	journal	December 2008
A historical perspective on protein crystallization from 1840 to the present day Giegé, Richard FEBS Journal, Vol. 280, Issue 24 https://doi.org/10.1111/febs.12580	journal	November 2013
The composition of newly synthesized proteins in the endoplasmic reticulum determines the transport pathways of soybean seed storage proteins Mori, Takashi; Maruyama, Nobuyuki; Nishizawa, Keito The Plant Journal, Vol. 40, Issue 2 https://doi.org/10.1111/j.1365-313X.2004.02204.x	journal	August 2004
Passage of dietary antigens into the blood of children with coeliac disease. Quantification and size distribution of absorbed antigens. Husby, S.; Foged, N.; Host, A. Gut, Vol. 28, Issue 9 https://doi.org/10.1136/gut.28.9.1062	journal	September 1987
Abnormal permeability precedes the development of a gluten sensitive enteropathy in Irish setter dogs. Hall, E. J.; Batt, R. M. Gut, Vol. 32, Issue 7 https://doi.org/10.1136/gut.32.7.749	journal	July 1991
Replacing American snacks with tree nuts increases consumption of key nutrients among US children and adults: results of an NHANES modeling study Rehm, Colin D.; Drewnowski, Adam Nutrition Journal, Vol. 16, Issue 1 https://doi.org/10.1186/s12937-017-0238-5	journal	March 2017
Natural History of Hazelnut Allergy and Current Approach to Its Diagnosis and Treatment Giannetti, Arianna; Ruggi, Alessandro; Ricci, Giampaolo Children, Vol. 10, Issue 3 https://doi.org/10.3390/children10030585	journal	March 2023
Food Allergens of Plant Origin Zhang, Yuzhu; Che, Huilian; Li, Caiming Foods, Vol. 12, Issue 11 https://doi.org/10.3390/foods12112232	journal	June 2023

Similar Records

Crystal structure of hetero hexameric 11S seed storage protein of hazelnut

Journal Article · 2024 · Plant Physiology and Biochemistry · OSTI ID:2581253

Guo, Feng; Zhang, Yuzhu; Howard, Andrew; +1 more

A hetero-micro-seeding strategy for readily crystallizing closely related protein variants

Journal Article · 2017 · Biochemical and Biophysical Research Communications · OSTI ID:22719127

Islam, Mohammad M.; Kuroda, Yutaka

Crystal structure of the N-terminal domain of the DnaB hexameric helicase

Journal Article · 1999 · Structure Fold. Des. · OSTI ID:796528

Fass, D; Bogdan, C; Berger, J

Title: Crystal structure of hetero hexameric 11S seed storage protein of hazelnut

Citation Formats

References (38)

Similar Records

Related Subjects