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Title: Non-mercury methylating microbial taxa are integral to understanding links between mercury methylation and elemental cycles in marine and freshwater sediments

Journal Article · · Environmental Pollution

The goal of this study was to explore the role of non-mercury (Hg) methylating taxa in mercury methylation and to identify potential links between elemental cycles and Hg methylation. Statistical approaches were utilized to investigate the microbial community and biochemical functions in relation to methylmercury (MeHg) concentrations in marine and freshwater sediments. Sediments were collected from the methylation zone (top 15 cm) in four Hg-contaminated sites. Both abiotic (e.g., sulfate, sulfide, iron, salinity, total organic matter, etc.) and biotic factors (e.g., hgcA, abundances of methylating and non-methylating taxa) were quantified. Random forest and stepwise regression were performed to assess whether non-methylating taxa were significantly associated with MeHg concentration. Co-occurrence and functional network analyses were constructed to explore associations between taxa by examining microbial community structure, composition, and biochemical functions across sites. Regression analysis showed that approximately 80% of the variability in sediment MeHg concentration was predicted by total mercury concentration, the abundances of Hg methylating taxa, and the abundances of the non-Hg methylating taxa. The co-occurrence networks identified Paludibacteraceae and Syntrophorhabdaceae as keystone non Hg methylating taxa in multiple sites, indicating the potential for syntrophic interactions with Hg methylators. Strong associations were also observed between methanogens and sulfate-reducing bacteria, which were likely symbiotic associations. The functional network results suggested that non-Hg methylating taxa play important roles in sulfur respiration, nitrogen respiration, and the carbon metabolism-related functions methylotrophy, methanotrophy, and chemoheterotrophy. Interestingly, keystone functions varied by site and did not involve carbon- and sulfur-related functions only. In conclusion, our findings highlight associations between methylating and non-methylating taxa and sulfur, carbon, and nitrogen cycles in sediment methylation zones, with implications for predicting and understanding the impact of climate and land/sea use changes on Hg methylation.

Research Organization:
Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States)
Sponsoring Organization:
USDOE Office of Science (SC), Biological and Environmental Research (BER)
Grant/Contract Number:
AC05-00OR22725
OSTI ID:
2317791
Journal Information:
Environmental Pollution, Journal Name: Environmental Pollution Journal Issue: 4 Vol. 346; ISSN 0269-7491
Publisher:
ElsevierCopyright Statement
Country of Publication:
United States
Language:
English

References (74)

Sediment quality assessment survey and toxicity identification evaluation studies in Lavaca Bay, Texas, a marine superfund site journal January 2001
Biotic formation of methylmercury: A bio–physico–chemical conundrum journal November 2019
ggplot2: ggplot2 journal February 2011
Microbial Recovery of Sulfur from Thiosulfate-Bearing Wastewater with Phototrophic and Sulfur-Reducing Bacteria journal January 1996
Quantification of chlorophyll a, chlorophyll b and pheopigments a in lake sediments through deconvolution of bulk UV–VIS absorption spectra journal June 2020
Mercury-methylating genes dsrB and hgcA in soils/sediments of the Three Gorges Reservoir journal December 2016
Investigation of legacy industrial mercury in floodplain soils: South River, Virginia, USA journal April 2019
Determination of accurate extinction coefficients and simultaneous equations for assaying chlorophylls a and b extracted with four different solvents: verification of the concentration of chlorophyll standards by atomic absorption spectroscopy journal August 1989
The roles of natural organic matter in chemical and microbial reduction of ferric iron journal May 2003
Differential responses of stream water and bed sediment microbial communities to watershed degradation journal January 2020
Symbiosis of sulfate-reducing bacteria and methanogenic archaea in sewer systems journal October 2020
Impact of river overflowing on trace element contamination of volcanic soils in south Italy: Part II. Soil biological and biochemical properties in relation to trace element speciation journal November 2006
History of mercury use and environmental contamination at the Oak Ridge Y-12 Plant journal January 2011
Statistical determination of crucial taxa indicative of pollution gradients in sediments of Lake Taihu, China journal March 2019
Marine mercury-methylating microbial communities from coastal to Capbreton Canyon sediments (North Atlantic Ocean) journal July 2020
Linear regression and the normality assumption journal June 2018
Bioassessment of heavy metal toxicity and enhancement of heavy metal removal by sulfate-reducing bacteria in the presence of zero valent iron journal December 2017
Amendments of nitrogen and sulfur mitigate carbon-promoting effect on microbial mercury methylation in paddy soils journal April 2023
The divergent effects of nitrate and ammonium application on mercury methylation, demethylation, and reduction in flooded paddy slurries journal October 2023
Mercury methylation linked to nitrification in the tropical North Atlantic Ocean journal December 2022
Current Trends in Methylotrophy journal August 2018
Microbial Communities Associated with Methylmercury Degradation in Paddy Soils journal May 2020
Mercury Methylation Genes Identified across Diverse Anaerobic Microbial Guilds in a Eutrophic Sulfate-Enriched Lake journal November 2020
Impacts of Sediment Particle Grain Size and Mercury Speciation on Mercury Bioavailability Potential journal September 2021
Contrasting Effects of Dissolved Organic Matter on Mercury Methylation by Geobacter sulfurreducens PCA and Desulfovibrio desulfuricans ND132 journal August 2017
Sulfurization of Dissolved Organic Matter Increases Hg–Sulfide–Dissolved Organic Matter Bioavailability to a Hg-Methylating Bacterium journal July 2017
Unraveling Microbial Communities Associated with Methylmercury Production in Paddy Soils journal October 2018
Determining the Reliability of Measuring Mercury Cycling Gene Abundance with Correlations with Mercury and Methylmercury Concentrations journal July 2019
Microbial Biosynthesis of Thiol Compounds: Implications for Speciation, Cellular Uptake, and Methylation of Hg(II) journal June 2019
Overlooked Role of Putative Non-Hg Methylators in Predicting Methylmercury Production in Paddy Soils journal October 2019
Acid Volatile Sulfides (AVS) in Sediment: An Environmental Chemistry Experiment journal February 1995
Importance of Dissolved Neutral Mercury Sulfides for Methyl Mercury Production in Contaminated Sediments journal April 2007
Methylation of Mercury by Bacteria Exposed to Dissolved, Nanoparticulate, and Microparticulate Mercuric Sulfides journal January 2012
Dissolved Organic Matter Enhances Microbial Mercury Methylation Under Sulfidic Conditions journal February 2012
Mechanisms Regulating Mercury Bioavailability for Methylating Microorganisms in the Aquatic Environment: A Critical Review journal February 2013
Relationship between Extracellular Low-Molecular-Weight Thiols and Mercury Species in Natural Lake Periphytic Biofilms journal June 2015
Precipitation of Mercuric Sulfide Nanoparticles in NOM-Containing Water: Implications for the Natural Environment journal April 2009
Historical Interrelated Variations of Mercury and Aquatic Organic Matter in Lake Sediment Cores from a Subarctic Lake in Yukon, Canada: Further Evidence toward the Algal-Mercury Scavenging Hypothesis journal October 2009
Random Forests journal January 2001
Global ecological patterns in uncultured Archaea journal October 2009
Geobacteraceae are important members of mercury-methylating microbial communities of sediments impacted by waste water releases journal January 2018
Crystalline iron oxides stimulate methanogenic benzoate degradation in marine sediment-derived enrichment cultures journal November 2020
Keystone taxa as drivers of microbiome structure and functioning journal May 2018
Modularity and community structure in networks journal May 2006
Mercury reduction and complexation by natural organic matter in anoxic environments journal January 2011
Racemicystis crocea gen. nov., sp. nov., a soil myxobacterium in the family Polyangiaceae journal June 2016
Soil organic matter availability and climate drive latitudinal patterns in bacterial diversity from tropical to cold temperate forests journal September 2017
A protocol for data exploration to avoid common statistical problems: Data exploration journal November 2009
Global prevalence and distribution of genes and microorganisms involved in mercury methylation journal October 2015
The Genetic Basis for Bacterial Mercury Methylation journal February 2013
Decoupling function and taxonomy in the global ocean microbiome journal September 2016
Carbon Amendments Alter Microbial Community Structure and Net Mercury Methylation Potential in Sediments journal November 2017
Development and Validation of Broad-Range Qualitative and Clade-Specific Quantitative Molecular Probes for Assessing Mercury Methylation in the Environment journal July 2016
Syntrophs Dominate Sequences Associated with the Mercury Methylation-Related Gene hgcA in the Water Conservation Areas of the Florida Everglades journal August 2014
Analysis of the Microbial Community Structure by Monitoring an Hg Methylation Gene (hgcA) in Paddy Soils along an Hg Gradient journal February 2014
Aspects of Bioavailability of Mercury for Methylation in Pure Cultures of Desulfobulbus propionicus (1pr3) journal January 2001
Microbial Community Resilience across Ecosystems and Multiple Disturbances journal May 2021
Sulfate-Reducing Bacteria: Principal Methylators of Mercury in Anoxic Estuarine Sediment † journal January 1985
The Structure and Function of Complex Networks journal January 2003
Difficulty in inferring microbial community structure based on co-occurrence network approaches journal June 2019
Experimental and Natural Warming Elevates Mercury Concentrations in Estuarine Fish journal March 2013
Strengths and Limitations of 16S rRNA Gene Amplicon Sequencing in Revealing Temporal Microbial Community Dynamics journal April 2014
Methylmercury Exposure and Health Effects in Humans: A Worldwide Concern journal February 2007
What do Interaction Network Metrics tell us About Specialization and Biological Traits journal December 2008
Challenges in the Quest for Keystones journal September 1996
Global phylogenetic community structure and β-diversity patterns in surface bacterioplankton metacommunities journal March 2010
Deciphering microbial interactions and detecting keystone species with co-occurrence networks journal May 2014
Soil Application of a Formulated Biocontrol Rhizobacterium, Pseudomonas chlororaphis PCL1606, Induces Soil Suppressiveness by Impacting Specific Microbial Communities journal August 2020
An Improved hgcAB Primer Set and Direct High-Throughput Sequencing Expand Hg-Methylator Diversity in Nature journal October 2020
Nutrient Exposure Alters Microbial Composition, Structure, and Mercury Methylating Activity in Periphyton in a Contaminated Watershed journal March 2021
Nutrient Inputs Stimulate Mercury Methylation by Syntrophs in a Subarctic Peatland journal October 2021
Preliminary Assessment of Microbial Community Structure of Wind-Tidal Flats in the Laguna Madre, Texas, USA journal July 2020
Microbial Communities Involved in Methane, Sulfur, and Nitrogen Cycling in the Sediments of the Barents Sea journal November 2021
Geochemical Characterization of Base Metals in Stream Water and Sediments in the Caddo Lake Watershed, Cass, Harrison and Marion Counties, Texas journal January 2020

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