DOE PAGES title logo U.S. Department of Energy
Office of Scientific and Technical Information

Title: Relationship between molecular structure and corrugations in self-assembled polypeptoid nanosheets revealed by cryogenic electron microscopy

Journal Article · · Physical Review Materials

Designing conformationally dynamic molecules that self-assemble into predictable nanostructures remains an important unmet challenge. This paper describes how atomic-scale cryogenic transmission electron microscopy (cryo-TEM) can be used to explore the relationship between molecular structure and self-assembly of block copolymers. We examined sheetlike micelles formed in water using a series of diblock copolypeptoids with the same hydrophilic block and three distinct crystalline hydrophobic blocks. Our cryo-TEM images revealed all the structures share nansoscale features, but differ in their intermolecular packing geometries. Different molecular arrangements, parallel and antiparallel V-shaped crystal motifs, were revealed by two-dimensional atomic-scale through-plane images. However, images from tilted samples revealed an unexpected feature when the hydrophobic polypeptoid block comprised phenyl rings with substituted bromine atoms at the para position. The nanosheets contained atomic-scale corrugations that were absent in the other systems which comprised unsubstituted aliphatic and aromatic side chains. We hypothesize that these corrugations are due to the dipolar characteristics of the brominated phenyl group and interactions between this group and water molecules. Published by the American Physical Society 2024

Sponsoring Organization:
USDOE Office of Science (SC), Basic Energy Sciences (BES)
Grant/Contract Number:
AC02-05CH11231
OSTI ID:
2301714
Alternate ID(s):
OSTI ID: 2433805
Journal Information:
Physical Review Materials, Journal Name: Physical Review Materials Journal Issue: 2 Vol. 8; ISSN PRMHAR; ISSN 2475-9953
Publisher:
American Physical SocietyCopyright Statement
Country of Publication:
United States
Language:
English

References (96)

Uniform patchy and hollow rectangular platelet micelles from crystallizable polymer blends journal May 2016
Tailored hierarchical micelle architectures using living crystallization-driven self-assembly in two dimensions journal September 2014
Influence of the Interplay of Crystallization and Chain Stretching on Micellar Morphologies:  Solution Self-Assembly of Coil−Crystalline Poly(isoprene-block-ferrocenylsilane) journal September 2002
Self-Organization of Diblock and Triblock Copolymers of Poly(l-lactide) and Poly(oxyethylene) into Nanostructured Bands and Their Network System. Proposition of a Doubly Twisted Chain Conformation of Poly(l-lactide) journal May 2001
Supramolecular Nanosheets Assembled from Poly(ethylene glycol)- b -poly( N -(2-phenylethyl)glycine) Diblock Copolymer Containing Crystallizable Hydrophobic Polypeptoid: Crystallization Driven Assembly Transition from Filaments to Nanosheets journal February 2019
Crystallization in Sequence-Defined Peptoid Diblock Copolymers Induced by Microphase Separation journal January 2014
Morphologically Tunable Square and Rectangular Nanosheets of a Simple Conjugated Homopolymer by Changing Solvents journal November 2019
Synthesis and Characterization of Amphiphilic Cyclic Diblock Copolypeptoids from N -Heterocyclic Carbene-Mediated Zwitterionic Polymerization of N -Substituted N -Carboxyanhydride journal December 2011
Sequence-specific polypeptoids: A diverse family of heteropolymers with stable secondary structure journal April 1998
Direct Observation of Wet Biological Samples by Graphene Liquid Cell Transmission Electron Microscopy journal June 2015
Extending the Scope of “Living” Crystallization-Driven Self-Assembly: Well-Defined 1D Micelles and Block Comicelles from Crystallizable Polycarbonate Block Copolymers journal November 2018
Semi-conducting 2D rectangles with tunable length via uniaxial living crystallization-driven self-assembly of homopolymer journal May 2021
Cryogenic Transmission Electron Microscopy Imaging of Vesicles Formed by a Polystyrene−Polyisoprene Diblock Copolymer journal August 2005
Tuning the Electrical Conductivity and Self-Assembly of Regioregular Polythiophene by Block Copolymerization: Nanowire Morphologies in New Di- and Triblock Copolymers We gratefully acknowledge support from the NSF (CHE-9807707). journal January 2002
Evidence for cis Amide Bonds in Peptoid Nanosheets journal April 2018
Electron Crystallography Of Biological Macromolecules book June 2007
The evolution of bicontinuous polymeric nanospheres in aqueous solution journal January 2016
Uniform, High-Aspect-Ratio, and Patchy 2D Platelets by Living Crystallization-Driven Self-Assembly of Crystallizable Poly(ferrocenyldimethylsilane)-Based Homopolymers with Hydrophilic Charged Termini journal August 2019
Two-dimensional assemblies from crystallizable homopolymers with charged termini journal January 2017
Tuning the Size of Cylindrical Micelles from Poly( l -lactide)- b -poly(acrylic acid) Diblock Copolymers Based on Crystallization-Driven Self-Assembly journal November 2013
Elucidating the assembled structure of amphiphiles in solution via cryogenic transmission electron microscopy journal January 2007
Graphene Liquid Cell Electron Microscopy: Progress, Applications, and Perspectives journal January 2021
Resolving the Morphology of Peptoid Vesicles at the 1 nm Length Scale Using Cryogenic Electron Microscopy journal January 2019
Electron crystallography of linear polymers: direct structure analysis of poly(epsilon-carprolactone). journal July 1991
Two-Dimensional Crystals of Poly(3-Alkyl- thiophene)s: Direct Visualization of Polymer Folds in Submolecular Resolution journal August 2000
Crystallization-Driven Self-Assembly of Coil–Comb-Shaped Polypeptoid Block Copolymers: Solution Morphology and Self-Assembly Pathways journal November 2019
Computational and Experimental Determination of the Properties, Structure, and Stability of Peptoid Nanosheets and Nanotubes journal May 2023
Liquid-Crystalline Phase Behavior in Polypeptoid Diblock Copolymers journal November 2018
Rapid formation and real-time observation of micron-sized conjugated nanofibers with tunable lengths and widths in 20 minutes by living crystallization-driven self-assembly journal January 2020
Synthesis and Self-Assembly of Poly(ferrocenyldimethylsilane-b-2-vinylpyridine) Diblock Copolymers journal April 2007
Advanced tomography techniques for inorganic, organic, and biological materials journal July 2016
“Chemically Shielded” Poly(ethylene oxide) Single Crystal Growth and Construction of Channel-Wire Arrays with Chemical and Geometric Recognitions on a Submicrometer Scale journal June 2004
Solid‐phase synthesis of three‐armed star‐shaped peptoids and their hierarchical self‐assembly journal January 2019
The Halogen Bond journal January 2016
Radiation damage and electron microscopy of organic polymers journal October 1974
Multicompartment Micelle Morphology Evolution in Degradable Miktoarm Star Terpolymers journal March 2010
Stable Dispersions of Highly Anisotropic Nanoparticles Formed by Cocrystallization of Enantiomeric Diblock Copolymers journal May 2007
Giant Wormlike Rubber Micelles journal February 1999
Cryo-crinkling: what happens to carbon films on copper grids at low temperature journal March 1993
Ring-opening polymerization-induced crystallization-driven self-assembly of poly-L-lactide-block-polyethylene glycol block copolymers (ROPI-CDSA) journal September 2020
Supramolecular Double Helices from Small C 3 -Symmetrical Molecules Aggregated in Water journal September 2020
Spontaneous Vesicles Formed from Hydroxide Surfactants: Evidence from Electron Microscopy journal September 1983
Imaging Unstained Synthetic Polymer Crystals and Defects on Atomic Length Scales Using Cryogenic Electron Microscopy journal September 2018
Cold‐stage microscopy system for fast‐frozen liquids journal June 1979
Liquid‐Phase Electron Microscopy for Soft Matter Science and Biology journal May 2020
Electron crystallography at atomic resolution: ab initio structure analysis of copper perchlorophthalocyanine journal October 1991
Electron microscopy of frozen hydrated biological specimens journal June 1976
Radiation damage in organic crystalline films journal January 1984
Electron crystallography of organic and biological molecules—Techniques and comparison to X-ray crystallographic results journal January 1994
Block Copolymer Assembly via Kinetic Control journal August 2007
Poly(3-alkylthiophene) Diblock Copolymers with Ordered Microstructures and Continuous Semiconducting Pathways journal June 2011
Peptoid nanosheets exhibit a new secondary-structure motif journal October 2015
Minimizing Crinkling of Soft Specimens Using Holey Gold Films on Molybdenum Grids for Cryogenic Electron Microscopy journal June 2021
Assembly and molecular order of two-dimensional peptoid nanosheets through the oil–water interface journal September 2014
Liquid cell transmission electron microscopy and its applications journal January 2020
On the Origins of Morphological Complexity in Block Copolymer Surfactants journal April 2003
Hierarchical supramolecular assembly of a single peptoid polymer into a planar nanobrush with two distinct molecular packing motifs journal December 2020
Highly stable and self-repairing membrane-mimetic 2D nanomaterials assembled from lipid-like peptoids journal July 2016
Designable and dynamic single-walled stiff nanotubes assembled from sequence-defined peptoids journal January 2018
Quantitative analysis of image contrast in electron micrographs of beam-sensitive crystals journal January 1985
Retrieving high-resolution information from disordered 2D crystals by single-particle cryo-EM journal April 2019
Peptoid Polymers: A Highly Designable Bioinspired Material journal May 2013
Control of Crystallization and Melting Behavior in Sequence Specific Polypeptoids journal July 2010
Control of radiation damage in the TEM journal April 2013
Quantitative Analysis of Electron Beam Damage in Organic Thin Films journal May 2017
Importance of the Positively Charged σ-Hole in Crystal Engineering of Halogenated Polypeptoids journal May 2022
A Close Look at Molecular Self-Assembly with the Transmission Electron Microscope journal July 2021
Atomic-Scale Corrugations in Crystalline Polypeptoid Nanosheets Revealed by Three-Dimensional Cryogenic Electron Microscopy journal April 2023
Imaging of Self-Assembled Structures: Interpretation of TEM and Cryo-TEM Images journal September 2010
Electron Crystallography of Two-Dimensional Crystals of Membrane Proteins journal January 1998
Cryogenic Transmission Electron Microscopy (Cryo-TEM) of Micelles and Vesicles Formed in Water by Poly(ethylene oxide)-Based Block Copolymers journal April 2002
High-resolution cryo-electron microscopy structure of block copolymer nanofibres with a crystalline core journal May 2023
Radiation damage in the TEM and SEM journal August 2004
Effect of processing and end groups on the crystal structure of polypeptoids studied by cryogenic electron microscopy at atomic length scales journal January 2019
Hierarchical Assembly of Peptoid‐Based Cylindrical Micelles Exhibiting Efficient Resonance Energy Transfer in Aqueous Solution journal August 2019
Free-floating ultrathin two-dimensional crystals from sequence-specific peptoid polymers journal April 2010
Atomic-level engineering and imaging of polypeptoid crystal lattices journal October 2019
Tunable assembly of biomimetic peptoids as templates to control nanostructure catalytic activity journal January 2018
Cylindrical Block Copolymer Micelles and Co-Micelles of Controlled Length and Architecture journal August 2007
Evolution of Multicompartment Micelles to Mixed Corona Micelles Using Solvent Mixtures journal September 2008
Early-Stage Aggregation and Crystalline Interactions of Peptoid Nanomembranes journal June 2021
Images of purple membrane at 2.8 Å resolution obtained by cryo-electron microscopy journal August 1988
Three-Dimensional Structure of P3HT Assemblies in Organic Solvents Revealed by Cryo-TEM journal March 2014
Aggregation of coil-crystalline block copolymers: equilibrium crystallization journal April 1991
Single-Crystal Polythiophene Microwires Grown by Self-Assembly journal March 2006
Crystallization-Driven Thermoreversible Gelation of Coil-Crystalline Cyclic and Linear Diblock Copolypeptoids journal April 2013
Shaken, Not Stirred: Collapsing a Peptoid Monolayer To Produce Free-Floating, Stable Nanosheets journal December 2011
Electron crystallography of chiral and non-chiral small molecules journal January 2022
Polyferrocenylsilane Block Copolymer Spherulites in Dilute Solution journal January 2023
Crystallization-driven sphere-to-rod transition of poly(lactide)-b-poly(acrylic acid) diblock copolymers: mechanism and kinetics journal January 2012
Images of paraffin monolayer crystals with perfect contrast: Minimization of beam-induced specimen motion journal January 2011
Structural Elucidation of a Polypeptoid Chain in a Crystalline Lattice Reveals Key Morphology-Directing Role of the N-Terminus journal February 2023
Universal Relationship between Molecular Structure and Crystal Structure in Peptoid Polymers and Prevalence of the cis Backbone Conformation journal January 2018
MotionCor2: anisotropic correction of beam-induced motion for improved cryo-electron microscopy journal February 2017
Folding of a single-chain, information-rich polypeptoid sequence into a highly ordered nanosheet journal January 2011
Directly Resolved Core-Corona Structure of Block Copolymer Micelles by Cryo-Transmission Electron Microscopy journal October 1999