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Title: Mineral reactivity determines root effects on soil organic carbon

Journal Article · · Nature Communications
ORCiD logo [1];  [2]; ORCiD logo [3]
  1. Utah State University, Logan, UT (United States); University of Minnesota, Saint Paul, MN (United States); Utah State University
  2. Utah State University, Logan, UT (United States)
  3. Utah State University, Logan, UT (United States); Imperial College London (United Kingdom)

Modern conceptual models of soil organic carbon (SOC) cycling focus heavily on the microbe-mineral interactions that regulate C stabilization. However, the formation of ‘stable’ (i.e. slowly cycling) soil organic matter, which consists mainly of microbial residues associated with mineral surfaces, is inextricably linked to C loss through microbial respiration. Therefore, what is the net impact of microbial metabolism on the total quantity of C held in the soil? To address this question, we constructed artificial root-soil systems to identify controls on C cycling across the plant-microbe-mineral continuum, simultaneously quantifying the formation of mineral-associated C and SOC losses to respiration. Here we show that root exudates and minerals interacted to regulate these processes: while roots stimulated respiratory C losses and depleted mineral-associated C pools in low-activity clays, root exudates triggered formation of stable C in high-activity clays. Moreover, we observed a positive correlation between the formation of mineral-associated C and respiration. This suggests that the growth of slow-cycling C pools comes at the expense of C loss from the system.

Research Organization:
Utah State University, Logan, UT (United States)
Sponsoring Organization:
USDOE Office of Science (SC), Biological and Environmental Research (BER)
Grant/Contract Number:
SC0020108
OSTI ID:
2007001
Journal Information:
Nature Communications, Journal Name: Nature Communications Journal Issue: 1 Vol. 14; ISSN 2041-1723
Publisher:
Nature Publishing GroupCopyright Statement
Country of Publication:
United States
Language:
English

References (64)

Artificial root instructions.pdf other January 2022
Soil respiration data dataset January 2023
Soil biogeochemical variables dataset January 2023
Wavelike Distributions of Microbial Populations along an Artificial Root Moving through Soil journal August 2000
Mechanisms of real and apparent priming effects and their dependence on soil microbial biomass and community structure: critical review journal October 2008
Density fractionation of forest soils: methodological questions and interpretation of incubation results and turnover time in an ecosystem context journal March 2007
C:N:P stoichiometry in soil: is there a “Redfield ratio” for the microbial biomass? journal July 2007
Empirical evidence that soil carbon formation from plant inputs is positively related to microbial growth journal January 2013
Beyond clay: towards an improved set of variables for predicting soil organic matter content journal February 2018
Is soil carbon mostly root carbon? Mechanisms for a specific stabilisation journal February 2005
An extraction method for measuring soil microbial biomass C journal January 1987
Fractionation of aquatic natural organic matter upon sorption to goethite and kaolinite journal May 1999
Mineral–Organic Associations: Formation, Properties, and Relevance in Soil Environments book December 2014
Biodegradation of forest floor organic matter bound to minerals via different binding mechanisms journal May 2007
Retention of dissolved organic matter by phyllosilicate and soil clay fractions in relation to mineral properties journal March 2004
Origins, roles and fate of organic acids in soils: A review journal January 2017
Soil organic carbon response to global environmental change depends on its distribution between mineral-associated and particulate organic matter: A meta-analysis journal November 2021
Microbial growth efficiencies across a soil moisture gradient assessed using 13C-acetic acid vapor and 15N-ammonia gas journal June 2009
Optimization of hydrolytic and oxidative enzyme methods for ecosystem studies journal July 2011
Root-induced changes in nutrient cycling in forests depend on exudation rates journal November 2014
Separate drivers for microbial carbon mineralization and physical protection of carbon journal June 2019
Simple Plant and Microbial Exudates Destabilize Mineral-Associated Organic Matter via Multiple Pathways journal February 2021
Put more carbon in soils to meet Paris climate pledges journal December 2018
Mineral protection of soil carbon counteracted by root exudates journal March 2015
Direct evidence for microbial-derived soil organic matter formation and its ecophysiological controls journal November 2016
Formation of soil organic matter via biochemical and physical pathways of litter mass loss journal September 2015
Soil-carbon response to warming dependent on microbial physiology journal April 2010
DADA2: High-resolution sample inference from Illumina amplicon data journal May 2016
QIIME allows analysis of high-throughput community sequencing data journal April 2010
The importance of anabolism in microbial control over soil carbon storage journal July 2017
Soil minerals affect taxon-specific bacterial growth journal December 2021
Plant roots increase both decomposition and stable organic matter formation in boreal forest soil journal September 2019
U1 snRNP regulates cancer cell migration and invasion in vitro journal January 2020
Towards a global-scale soil climate mitigation strategy journal October 2020
Fast-decaying plant litter enhances soil carbon in temperate forests but not through microbial physiological traits journal March 2022
Global stocks and capacity of mineral-associated soil organic carbon journal July 2022
Protecting irrecoverable carbon in Earth’s ecosystems journal March 2020
Soil carbon storage informed by particulate and mineral-associated organic matter journal November 2019
Different climate sensitivity of particulate and mineral-associated soil organic matter journal April 2021
Best practices for analysing microbiomes journal May 2018
Mineral protection regulates long-term global preservation of natural organic carbon journal June 2019
Carboxyl-richness controls organic carbon preservation during coprecipitation with iron (oxyhydr)oxides in the natural environment journal November 2021
The UNITE database for molecular identification of fungi: handling dark taxa and parallel taxonomic classifications journal October 2018
Global distribution, formation and fate of mineral‐associated soil organic matter under a changing climate: A trait‐based perspective journal March 2022
Microbial community assembly differs across minerals in a rhizosphere microcosm journal September 2018
Organic matter coatings of soil minerals affect adsorptive interactions with phenolic and amino acids: Adsorption of phenolic and amino acids on OM-coated minerals journal April 2018
Below-ground organic matter accumulation along a boreal forest fertility gradient relates to guild interaction within fungal communities journal October 2017
The Microbial Efficiency-Matrix Stabilization (MEMS) framework integrates plant litter decomposition with soil organic matter stabilization: do labile plant inputs form stable soil organic matter? journal February 2013
Rhizosphere processes are quantitatively important components of terrestrial carbon and nutrient cycles journal January 2015
Dual, differential isotope labeling shows the preferential movement of labile plant constituents into mineral-bonded soil organic matter journal March 2016
Pathways of mineral‐associated soil organic matter formation: Integrating the role of plant carbon source, chemistry, and point of entry journal November 2018
Hyphae move matter and microbes to mineral microsites: Integrating the hyphosphere into conceptual models of soil organic matter stabilization journal January 2022
Enhanced root exudation induces microbial feedbacks to N cycling in a pine forest under long-term CO2 fumigation: Rhizosphere feedbacks in CO2-enriched forests journal December 2010
Evidence for the primacy of living root inputs, not root or shoot litter, in forming soil organic carbon journal August 2018
Root effects on soil organic carbon: a double‐edged sword journal December 2020
Roots and Associated Fungi Drive Long-Term Carbon Sequestration in Boreal Forest journal March 2013
Greengenes, a Chimera-Checked 16S rRNA Gene Database and Workbench Compatible with ARB journal July 2006
Fitting Linear Mixed-Effects Models Using lme4 journal January 2015
Effects of Forest Conversion on the Carbon Budget of a Tropical Soil journal September 1983
Differential Growth Responses of Soil Bacterial Taxa to Carbon Substrates of Varying Chemical Recalcitrance journal January 2011
Artificial root instructions.pdf other January 2022
Soil respiration data dataset January 2023
Soil biogeochemical variables dataset January 2023
Soil biogeochemical variables dataset January 2023