Prescribed fire selects for a pyrophilous soil sub‐community in a northern California mixed conifer forest

Fischer, Monika S.; Patel, Neem J.; de Lorimier, Phillip J.; Traxler, Matthew F.

doi:10.1111/1462-2920.16475

Title: Prescribed fire selects for a pyrophilous soil sub‐community in a northern California mixed conifer forest

Journal Article · 07 August 2023 · Environmental Microbiology

DOI: https://doi.org/10.1111/1462-2920.16475 · OSTI ID:1994428

Fischer, Monika S. ^[1]; Patel, Neem J. ^[1]; de Lorimier, Phillip J. ^[1];

^[1]

Department of Plant and Microbial Biology University of California, Berkeley Berkeley California USA

Abstract Prescribed fire is a critical strategy for mitigating the effects of catastrophic wildfires. While the above‐ground response to fire has been well‐documented, fewer studies have addressed the effect of prescribed fire on soil microorganisms. To understand how soil microbial communities respond to prescribed fire, we sampled four plots at a high temporal resolution (two burned, two controls), for 17 months, in a mixed conifer forest in northern California, USA. Using amplicon sequencing, we found that prescribed fire significantly altered both fungal and bacterial community structure. We found that most differentially abundant fungal taxa had a positive fold‐change, while differentially abundant bacterial taxa generally had a negative fold‐change. We tested the null hypothesis that these communities assembled due to neutral processes (i.e., drift and/or dispersal), finding that >90% of taxa fit this neutral prediction. However, a dynamic sub‐community composed of burn‐associated indicator taxa that were positively differentially abundant was enriched for non‐neutral amplicon sequence variants, suggesting assembly via deterministic processes. In synthesizing these results, we identified 15 pyrophilous taxa with a significant and positive response to prescribed burns. Together, these results lay the foundation for building a process‐driven understanding of microbial community assembly in the context of the classical disturbance regime of fire.

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Research Organization:: Univ. of Wisconsin, Madison, WI (United States)

Sponsoring Organization:: USDOE; USDOE Office of Science (SC)

Grant/Contract Number:: SC0020351

OSTI ID:: 1994428

Journal Information:: Environmental Microbiology, Journal Name: Environmental Microbiology Journal Issue: 11 Vol. 25; ISSN 1462-2912

Publisher:: Wiley-BlackwellCopyright Statement

Country of Publication:: United Kingdom

Language:: English

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Post-fire dynamics of ectomycorrhizal fungal communities in a Scots pine (Pinus sylvestris L.) forest of Poland Olchowik, Jacek; Hilszczańska, Dorota; Studnicki, Marcin PeerJ, Vol. 9 https://doi.org/10.7717/peerj.12076	journal	September 2021
Non-biological synthetic spike-in controls and the AMPtk software pipeline improve mycobiome data Palmer, Jonathan M.; Jusino, Michelle A.; Banik, Mark T. PeerJ, Vol. 6 https://doi.org/10.7717/peerj.4925	journal	January 2018

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