A subcellular biochemical model for T6SS dynamics reveals winning competitive strategies

Journal Article · 13 June 2023 · PNAS Nexus

DOI: https://doi.org/10.1093/pnasnexus/pgad195 · OSTI ID:1989268

Lin, Yuexia Luna ; Smith, Stephanie N. ; Kanso, Eva ; Septer, Alecia N. ; Rycroft, Chris H. ; Bayer, ed., Edward

Abstract The type VI secretion system (T6SS) is a broadly distributed interbacterial weapon that can be used to eliminate competing bacterial populations. Although unarmed target populations are typically used to study T6SS function in vitro, bacteria most likely encounter other T6SS-armed competitors in nature. However, the connection between subcellular details of the T6SS and the outcomes of such mutually lethal battles is not well understood. Here, we incorporate biological data derived from natural competitors of Vibrio fischeri light organ symbionts to build a biochemical model for T6SS at the single-cell level, which we then integrate into an agent-based model (ABM). Using the ABM, we isolate and experiment with strain-specific physiological differences between competitors in ways not possible with biological samples to identify winning strategies for T6SS-armed populations. Through in vitro experiments, we discover that strain-specific differences exist in T6SS activation speed. ABM simulations corroborate that faster activation is dominant in determining survival during competition. Once competitors are fully activated, the energy required for T6SS creates a tipping point where increased weapon building and firing becomes too costly to be advantageous. Through ABM simulations, we identify the threshold where this transition occurs in the T6SS parameter space. We also find that competitive outcomes depend on the geometry of the battlefield: unarmed target cells survive at the edges of a range expansion where unlimited territory can be claimed. Alternatively, competitions within a confined space, much like the light organ crypts where natural V. fischeri compete, result in the rapid elimination of the unarmed population.

• Sponsoring Organization: USDOE
• Grant/Contract Number: AC02-05CH11231
• OSTI ID: 1989268
• Journal Information: PNAS Nexus, Journal Name: PNAS Nexus Journal Issue: 7 Vol. 2; ISSN 2752-6542
• Publisher: Oxford University PressCopyright Statement
• Country of Publication: United States
• Language: English