DOE PAGES title logo U.S. Department of Energy
Office of Scientific and Technical Information

Title: Symmetry-specific orientational order parameters for complex structures

Journal Article · · Journal of Chemical Physics
DOI: https://doi.org/10.1063/5.0076915 · OSTI ID:1902055

A comprehensive framework of characterizing complex self-assembled structures with a set of orientational order parameters is presented. It is especially relevant in the context of using anisotropic building blocks with various symmetries. Two classes of tensor order parameters are associated with polyhedral nematic and bond orientational order. For the latter, a variation of classical bond order parameters (BOPs) is introduced, which takes advantage of the symmetry of constituent particles and/or expected crystalline phases. These symmetrized BOPs can be averaged over an entire system or assigned locally to an individual bond. By combining that with the bond percolation procedure, one is able to identify coherent domains within a self-assembled structure. As a demonstration of the proposed framework, we apply it to a simulated hybrid system that combines isotropic and patchy particles with octahedral symmetry. In conclusion, not only does the methodology allow one to identify individual crystalline domains but also it detects coherent clusters of a peculiar compact amorphous structure that is not space-filling and lacks any long-range order.

Research Organization:
Brookhaven National Laboratory (BNL), Upton, NY (United States)
Sponsoring Organization:
National Science Foundation (NSF); Rutgers University; USDOE; USDOE Office of Science (SC), Basic Energy Sciences (BES)
Grant/Contract Number:
SC0012704
OSTI ID:
1902055
Report Number(s):
BNL-223765-2022-JAAM
Journal Information:
Journal of Chemical Physics, Journal Name: Journal of Chemical Physics Journal Issue: 5 Vol. 156; ISSN 0021-9606
Publisher:
American Institute of Physics (AIP)Copyright Statement
Country of Publication:
United States
Language:
English

References (41)

Field theories with « Superconductor » solutions journal January 1961
On Symmetric irreducible tensors in d -dimensions journal November 1998
The theory of crystal ordering journal January 1982
Principles of Condensed Matter Physics book January 1995
Identification of Clathrate Hydrates, Hexagonal Ice, Cubic Ice, and Liquid Water in Simulations: the CHILL+ Algorithm journal November 2014
Anisotropy of building blocks and their assembly into complex structures journal August 2007
Lattice engineering through nanoparticle–DNA frameworks journal February 2016
Liquids more stable than crystals in particles with limited valence and flexible bonds journal August 2013
Ordered three-dimensional nanomaterials using DNA-prescribed and valence-controlled material voxels journal January 2020
Local bond order parameters for accurate determination of crystal structures in two and three dimensions journal January 2018
Numerical prediction of absolute crystallization rates in hard-sphere colloids journal February 2004
The Physics of Liquid Crystals journal May 1995
Accurate determination of crystal structures based on averaged local bond order parameters journal September 2008
A general set of order parameters for molecular crystals journal February 2011
Numerical calculation of the rate of crystal nucleation in a Lennard‐Jones system at moderate undercooling journal June 1996
Controlling morphology in hybrid isotropic/patchy particle assemblies journal January 2022
Ordering, metastability and phase transitions in two-dimensional systems journal April 1973
Traceless cartesian tensor forms for spherical harmonic functions: new theorems and applications to electrostatics of dielectric media journal October 1989
Strong orientational coordinates and orientational order parameters for symmetric objects journal October 2015
Theory and computer simulation for the cubatic phase of cut spheres journal March 2009
Phase behavior of colloidal superballs: Shape interpolation from spheres to cubes journal June 2010
Precursors of order in aggregates of patchy particles journal July 2013
Chromatic patchy particles: Effects of specific interactions on liquid structure journal July 2015
Classification of point-group-symmetric orientational ordering tensors journal August 2016
Generic first-order phase transitions between isotropic and orientational phases with polyhedral symmetries journal January 2018
Dislocation-mediated melting in two dimensions journal March 1979
Bond-orientational order, dislocation loops, and melting of solids and smectic- A liquid crystals journal July 1981
Bond-orientational order in liquids and glasses journal July 1983
Theory of Two-Dimensional Melting journal July 1978
Should All Crystals Be bcc? Landau Theory of Solidification and Crystal Nucleation journal September 1978
Quasicrystals: A New Class of Ordered Structures journal December 1984
Spherical-harmonic tensors journal October 2020
Generalized Liquid Crystals: Giant Fluctuations and the Vestigial Chiral Order of I , O , and T Matter journal October 2016
Dense Packing and Symmetry in Small Clusters of Microspheres journal July 2003
Diamond family of nanoparticle superlattices journal February 2016
Bond orientational order in liquids: Towards a unified description of water-like anomalies, liquid-liquid transition, glass transition, and crystallization: Bond orientational order in liquids journal October 2012
Phase transition of an isotropic system to a nonuniform state book August 1996
Characterizing Structure Through Shape Matching and Applications to Self-Assembly journal March 2011
Dynamic Ginzburg-Landau Theory for the Liquid-Solid Phase Transition journal January 1980
Tensor series expansion of a spherical function for the use in constitutive theory of materials containing orientable particles journal January 2018
A New Relatively Simple Approach to Multipole Interactions in Either Spherical Harmonics or Cartesians, Suitable for Implementation into Ewald Sums journal December 2019