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Title: GalR, GalX and AraR co-regulate $$\tiny {D}$$-galactose and $$\tiny{L}$$-arabinose utilization in Aspergillus nidulans

Journal Article · · Microbial Biotechnology (Online)

Filamentous fungi produce a wide variety of enzymes in order to efficiently degrade plant cell wall polysaccharides. The production of these enzymes is controlled by transcriptional regulators, which also control the catabolic pathways that convert the released monosaccharides. Two transcriptional regulators, GalX and GalR, control d-galactose utilization in the model filamentous fungus Aspergillus nidulans, while the arabinanolytic regulator AraR regulates l-arabinose catabolism. d-Galactose and l-arabinose are commonly found together in polysaccharides, such as arabinogalactan, xylan and rhamnogalacturonan I. Therefore, the catabolic pathways that convert d-galactose and l-arabinose are often also likely to be active simultaneously. In this study, we investigated the interaction between GalX, GalR and AraR in d-galactose and l-arabinose catabolism. For this, we generated single, double and triple mutants of the three regulators, and analysed their growth and enzyme and gene expression profiles. Our results clearly demonstrated that GalX, GalR and AraR co-regulate d-galactose catabolism in A. nidulans. GalX has a prominent role on the regulation of genes of d-galactose oxido-reductive pathway, while AraR can compensate for the absence of GalR and/or GalX.

Research Organization:
Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States)
Sponsoring Organization:
Academy of Finland; Chinese Scholarship Council (CSC); Dutch Research Council (NWO); Hungarian National Research, Development and Innovation Fund; USDOE Office of Science (SC), Biological and Environmental Research (BER)
Grant/Contract Number:
AC02-05CH11231
OSTI ID:
1894084
Journal Information:
Microbial Biotechnology (Online), Journal Name: Microbial Biotechnology (Online) Journal Issue: 6 Vol. 15; ISSN 1751-7915
Publisher:
WileyCopyright Statement
Country of Publication:
United States
Language:
English

References (37)

Regulation of formation of the intracellular β-gaiactosidase activity ofAspergillus nidulans journal January 2002
The alternative d-galactose degrading pathway of Aspergillus nidulans proceeds via l-sorbose journal January 2004
Fungal arabinan and l-arabinose metabolism journal January 2011
Enzymatic Deconstruction of Backbone Structures of the Ramified Regions in Pectins journal September 2007
Enzyme lesions in galactose non-utilising mutants of Aspergillus nidulans journal February 1970
Sugar Catabolism in Aspergillus and Other Fungi Related to the Utilization of Plant Biomass book November 2014
Engineering of primary carbon metabolism in filamentous fungi journal November 2020
The structure, function, and biosynthesis of plant cell wall pectic polysaccharides journal September 2009
CRISPR/Cas9 facilitates rapid generation of constitutive forms of transcription factors in Aspergillus niger through specific on-site genomic mutations resulting in increased saccharification of plant biomass journal May 2020
Improvement of enzymatic xylooligosaccharides production by the co-utilization of xylans from different origins journal October 2013
Sorbitol dehydrogenase of Aspergillus niger , SdhA, is part of the oxido-reductive d -galactose pathway and essential for d -sorbitol catabolism journal January 2012
Biodiversity and evolution of primary carbon metabolism in Aspergillus nidulans and other Aspergillus spp. journal March 2009
Identification of the galactitol dehydrogenase, LadB, that is part of the oxido-reductive d-galactose catabolic pathway in Aspergillus niger journal February 2012
l-Arabinose induces d-galactose catabolism via the Leloir pathway in Aspergillus nidulans journal February 2019
Identification of a gene encoding the last step of the L-rhamnose catabolic pathway in Aspergillus niger revealed the inducer of the pathway regulator journal April 2020
The gold-standard genome of Aspergillus niger NRRL 3 enables a detailed view of the diversity of sugar catabolism in fungi journal September 2018
The Missing Link in the Fungal l -Arabinose Catabolic Pathway, Identification of the l -Xylulose Reductase Gene , journal May 2002
HISAT: a fast spliced aligner with low memory requirements journal March 2015
The Aspergillus niger transcriptional activator XlnR, which is involved in the degradation of the polysaccharides xylan and cellulose, also regulates d-xylose reductase gene expression journal April 2000
l- xylo -3-Hexulose Reductase Is the Missing Link in the Oxidoreductive Pathway for d-Galactose Catabolism in Filamentous Fungi journal May 2012
Structure and Function of Enzymes of the Leloir Pathway for Galactose Metabolism journal August 2003
featureCounts: an efficient general purpose program for assigning sequence reads to genomic features journal November 2013
The Structure and Functions of Xyloglucan journal January 1989
The d-xylose reductase of Hypocrea jecorina is the major aldose reductase in pentose and d-galactose catabolism and necessary for β-galactosidase and cellulase induction by lactose journal November 2007
The metabolic role and evolution of l-arabinitol 4-dehydrogenase of Hypocrea jecorina journal May 2004
Characterization of an Aspergillus nidulans L-arabitol dehydrogenase mutant journal October 1994
Unique Regulatory Mechanism for d-Galactose Utilization in Aspergillus nidulans journal August 2011
The Transcriptional Activator XlnR Regulates Both Xylanolytic and Endoglucanase Gene Expression inAspergillus niger journal October 1998
A New Black Aspergillus Species, A. vadensis, Is a Promising Host for Homologous and Heterologous Protein Production journal July 2004
Aspergillus galactose metabolism is more complex than that of Saccharomyces: the story of GalDGAL7 and GalEGAL1 journal July 2013
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2 journal December 2014
Genetic Interaction of Aspergillus nidulans galR, xlnR and araR in Regulating D-Galactose and L-Arabinose Release and Catabolism Gene Expression journal November 2015
Efficient genome editing using tRNA promoter-driven CRISPR/Cas9 gRNA in Aspergillus niger journal August 2018
Lactose and D-galactose catabolism in the filamentous fungusAspergillus nidulans journal June 2008
Analysis of regulation of pentose utilisation in Aspergillus niger reveals evolutionary adaptations in Eurotiales journal June 2011
Re-routing of Sugar Catabolism Provides a Better Insight Into Fungal Flexibility in Using Plant Biomass-Derived Monomers as Substrates journal March 2021
Development on ethanol production from xylose by recombinant Saccharomyces cerevisiae journal January 2009