|
Characterizing flexible and intrinsically unstructured biological macromolecules by SAS using the Porod-Debye law
|
journal
|
April 2011 |
|
Proteopedia: Rossmann fold: A beta-alpha-beta fold at dinucleotide binding sites: Rossmann Fold in FAD, NAD and NADP Binding Domains
|
journal
|
February 2015 |
|
Fluorescence In Situ Imaging of Dendritic RNAs at Single‐Molecule Resolution
|
journal
|
July 2019 |
|
Crystal contacts as nature's docking solutions
|
journal
|
January 2010 |
|
Intervening Sequences of Regularly Spaced Prokaryotic Repeats Derive from Foreign Genetic Elements
|
journal
|
February 2005 |
|
CRISPR-Cas adaptive immune systems in Sulfolobales: genetic studies and molecular mechanisms
|
journal
|
October 2020 |
|
Size-Distribution Analysis of Macromolecules by Sedimentation Velocity Ultracentrifugation and Lamm Equation Modeling
|
journal
|
March 2000 |
|
Normalization of nomenclature for peptide motifs as ligands of modular protein domains
|
journal
|
February 2002 |
|
[20] Processing of X-ray diffraction data collected in oscillation mode
|
book
|
January 1997 |
|
Calculations and Publication-Quality Illustrations for Analytical Ultracentrifugation Data
|
book
|
January 2015 |
|
Sedimentation equilibrium analysis of protein interactions with global implicit mass conservation constraints and systematic noise decomposition
|
journal
|
March 2004 |
|
Prediction of Hydrodynamic and Other Solution Properties of Rigid Proteins from Atomic- and Residue-Level Models
|
journal
|
August 2011 |
|
RNA-Guided RNA Cleavage by a CRISPR RNA-Cas Protein Complex
|
journal
|
November 2009 |
|
Co-transcriptional DNA and RNA Cleavage during Type III CRISPR-Cas Immunity
|
journal
|
May 2015 |
|
Structural and Mechanistic Basis of PAM-Dependent Spacer Acquisition in CRISPR-Cas Systems
|
journal
|
November 2015 |
|
The Biology of CRISPR-Cas: Backward and Forward
|
journal
|
March 2018 |
|
CBASS Immunity Uses CARF-Related Effectors to Sense 3′–5′- and 2′–5′-Linked Cyclic Oligonucleotide Signals and Protect Bacteria from Phage Infection
|
journal
|
July 2020 |
|
Broad Targeting Specificity during Bacterial Type III CRISPR-Cas Immunity Constrains Viral Escape
|
journal
|
September 2017 |
|
Specialized Weaponry: How a Type III-A CRISPR-Cas System Excels at Combating Phages
|
journal
|
September 2017 |
|
Coevolution between bacterial CRISPR-Cas systems and their bacteriophages
|
journal
|
May 2021 |
|
Inference of Macromolecular Assemblies from Crystalline State
|
journal
|
September 2007 |
|
The Structure of the CRISPR-Associated Protein Csa3 Provides Insight into the Regulation of the CRISPR/Cas System
|
journal
|
January 2011 |
|
A Type III CRISPR Ancillary Ribonuclease Degrades Its Cyclic Oligoadenylate Activator
|
journal
|
July 2019 |
|
Structure of an OhrR-ohrA Operator Complex Reveals the DNA Binding Mechanism of the MarR Family
|
journal
|
October 2005 |
|
Structure and Mechanism of the CMR Complex for CRISPR-Mediated Antiviral Immunity
|
journal
|
February 2012 |
|
Spatiotemporal Control of Type III-A CRISPR-Cas Immunity: Coupling DNA Degradation with the Target RNA Recognition
|
journal
|
April 2016 |
|
Structural Basis for the Canonical and Non-canonical PAM Recognition by CRISPR-Cpf1
|
journal
|
August 2017 |
|
Cas4-Dependent Prespacer Processing Ensures High-Fidelity Programming of CRISPR Arrays
|
journal
|
April 2018 |
|
CRISPR-Cas III-A Csm6 CARF Domain Is a Ring Nuclease Triggering Stepwise cA4 Cleavage with ApA>p Formation Terminating RNase Activity
|
journal
|
September 2019 |
|
Protein production by auto-induction in high-density shaking cultures
|
journal
|
May 2005 |
|
Discovery of Oligonucleotide Signaling Mediated by CRISPR-Associated Polymerases Solves Two Puzzles but Leaves an Enigma
|
journal
|
September 2017 |
|
Accurate assessment of mass, models and resolution by small-angle scattering
|
journal
|
April 2013 |
|
Structural basis of PAM-dependent target DNA recognition by the Cas9 endonuclease
|
journal
|
July 2014 |
|
Conditional tolerance of temperate phages via transcription-dependent CRISPR-Cas targeting
|
journal
|
August 2014 |
|
Structural basis for promiscuous PAM recognition in type I–E Cascade from E. coli
|
journal
|
February 2016 |
|
New CRISPR–Cas systems from uncultivated microbes
|
journal
|
December 2016 |
|
Type III CRISPR–Cas systems produce cyclic oligoadenylate second messengers
|
journal
|
July 2017 |
|
Evolution and classification of the CRISPR–Cas systems
|
journal
|
May 2011 |
|
Unravelling the structural and mechanistic basis of CRISPR–Cas systems
|
journal
|
June 2014 |
|
An updated evolutionary classification of CRISPR–Cas systems
|
journal
|
September 2015 |
|
Cas1–Cas2 complex formation mediates spacer acquisition during CRISPR–Cas adaptive immunity
|
journal
|
May 2014 |
|
Structure of Csx1-cOA4 complex reveals the basis of RNA decay in Type III-B CRISPR-Cas
|
journal
|
September 2019 |
|
Structure and mechanism of a Type III CRISPR defence DNA nuclease activated by cyclic oligoadenylate
|
journal
|
January 2020 |
|
Activation and self-inactivation mechanisms of the cyclic oligoadenylate-dependent CRISPR ribonuclease Csm6
|
journal
|
March 2020 |
|
Machine-learning approach expands the repertoire of anti-CRISPR protein families
|
journal
|
July 2020 |
|
Ring nucleases deactivate type III CRISPR ribonucleases by degrading cyclic oligoadenylate
|
journal
|
September 2018 |
|
An anti-CRISPR viral ring nuclease subverts type III CRISPR immunity
|
journal
|
January 2020 |
|
The Card1 nuclease provides defence during type III CRISPR immunity
|
journal
|
January 2021 |
|
Type III-A CRISPR immunity promotes mutagenesis of staphylococci
|
journal
|
April 2021 |
|
CRISPR interference: a structural perspective
|
journal
|
June 2013 |
|
Hot and crispy: CRISPR–Cas systems in the hyperthermophile Sulfolobus solfataricus
|
journal
|
November 2013 |
|
Characterization and applications of Type I CRISPR-Cas systems
|
journal
|
January 2020 |
|
Identification of genes that are associated with DNA repeats in prokaryotes
|
journal
|
March 2002 |
The life science x-ray scattering beamline at NSLS-II
- DiFabio, Jonathan; Chodankar, Shirish; Pjerov, Sal
-
PROCEEDINGS OF THE 12TH INTERNATIONAL CONFERENCE ON SYNCHROTRON RADIATION INSTRUMENTATION – SRI2015, AIP Conference Proceedings
https://doi.org/10.1063/1.4952872
|
conference
|
January 2016 |
|
Interference by clustered regularly interspaced short palindromic repeat (CRISPR) RNA is governed by a seed sequence
|
journal
|
June 2011 |
|
Structural and Functional Characterization of an Archaeal Clustered Regularly Interspaced Short Palindromic Repeat (CRISPR)-associated Complex for Antiviral Defense (CASCADE)
|
journal
|
April 2011 |
|
A seed motif for target RNA capture enables efficient immune defence by a type III-B CRISPR-Cas system
|
journal
|
May 2019 |
|
Evolutionary and functional classification of the CARF domain superfamily, key sensors in prokaryotic antivirus defense
|
journal
|
July 2020 |
|
Tcoffee@igs: a web server for computing, evaluating and combining multiple sequence alignments
|
journal
|
July 2003 |
|
CRISPRFinder: a web tool to identify clustered regularly interspaced short palindromic repeats
|
journal
|
May 2007 |
|
Proteins and DNA elements essential for the CRISPR adaptation process in Escherichia coli
|
journal
|
February 2012 |
|
Transcriptional regulator-mediated activation of adaptation genes triggers CRISPR de novo spacer acquisition
|
journal
|
January 2015 |
|
Haloarcula hispanica CRISPR authenticates PAM of a target sequence to prime discriminative adaptation
|
journal
|
May 2014 |
|
ChEBI in 2016: Improved services and an expanding collection of metabolites
|
journal
|
October 2015 |
|
Coupling transcriptional activation of CRISPR–Cas system and DNA repair genes by Csa3a in Sulfolobus islandicus
|
journal
|
July 2017 |
|
Cmr1 enables efficient RNA and DNA interference of a III-B CRISPR–Cas system by binding to target RNA and crRNA
|
journal
|
September 2017 |
|
CRISPR-Cas: biology, mechanisms and relevance
|
journal
|
November 2016 |
|
Cas6 is an endoribonuclease that generates guide RNAs for invader defense in prokaryotes
|
journal
|
December 2008 |
|
Bipartite recognition of target RNAs activates DNA cleavage by the Type III-B CRISPR–Cas system
|
journal
|
February 2016 |
|
RNA-activated DNA cleavage by the Type III-B CRISPR–Cas effector complex
|
journal
|
February 2016 |
|
Phaser crystallographic software
|
journal
|
July 2007 |
|
New developments in the ATSAS program package for small-angle scattering data analysis
|
journal
|
March 2012 |
|
GNOM – a program package for small-angle scattering data processing
|
journal
|
October 1991 |
|
Coot model-building tools for molecular graphics
|
journal
|
November 2004 |
|
PHENIX: a comprehensive Python-based system for macromolecular structure solution
|
journal
|
January 2010 |
|
BioXTAS RAW : improvements to a free open-source program for small-angle X-ray scattering data reduction and analysis
|
journal
|
September 2017 |
|
A novel interference mechanism by a type IIIB CRISPR-Cmr module in Sulfolobus : Novel CRISPR type IIIB interference
|
journal
|
February 2013 |
|
CRISPR Provides Acquired Resistance Against Viruses in Prokaryotes
|
journal
|
March 2007 |
|
Small CRISPR RNAs Guide Antiviral Defense in Prokaryotes
|
journal
|
August 2008 |
|
Multiplex Genome Engineering Using CRISPR/Cas Systems
|
journal
|
January 2013 |
|
Crystal structure of a CRISPR RNA-guided surveillance complex bound to a ssDNA target
|
journal
|
August 2014 |
|
The new frontier of genome engineering with CRISPR-Cas9
|
journal
|
November 2014 |
|
Diverse evolutionary roots and mechanistic variations of the CRISPR-Cas systems
|
journal
|
August 2016 |
|
A cyclic oligonucleotide signaling pathway in type III CRISPR-Cas systems
|
journal
|
June 2017 |
|
Discovery of widespread type I and type V CRISPR-Cas inhibitors
|
journal
|
September 2018 |
|
Phage Response to CRISPR-Encoded Resistance in Streptococcus thermophilus
|
journal
|
December 2007 |
|
Massive Activation of Archaeal Defense Genes during Viral Infection
|
journal
|
August 2013 |
|
Nucleotide sequence of the iap gene, responsible for alkaline phosphatase isozyme conversion in Escherichia coli, and identification of the gene product.
|
journal
|
December 1987 |
|
CRISPR-Cas Systems in Bacteria and Archaea: Versatile Small RNAs for Adaptive Defense and Regulation
|
journal
|
December 2011 |
|
Three CRISPR-Cas immune effector complexes coexist in Pyrococcus furiosus
|
journal
|
April 2015 |
|
Cyclic oligoadenylate signaling and regulation by ring nucleases during type III CRISPR defense
|
journal
|
May 2021 |
|
A Guild of 45 CRISPR-Associated (Cas) Protein Families and Multiple CRISPR/Cas Subtypes Exist in Prokaryotic Genomes
|
journal
|
January 2005 |
|
Type I-E CRISPR-Cas Systems Discriminate Target from Non-Target DNA through Base Pairing-Independent PAM Recognition
|
journal
|
September 2013 |
|
CARF and WYL domains: ligand-binding regulators of prokaryotic defense systems
|
journal
|
April 2014 |
|
CRISPR-Associated Factor Csa3b Regulates CRISPR Adaptation and Cmr-Mediated RNA Interference in Sulfolobus islandicus
|
journal
|
August 2020 |
|
Heavily Armed Ancestors: CRISPR Immunity and Applications in Archaea with a Comparative Analysis of CRISPR Types in Sulfolobales
|
journal
|
November 2020 |
|
Genetic determinants of PAM-dependent DNA targeting and pre-crRNA processing in Sulfolobus islandicus
|
journal
|
February 2013 |
|
CRISPR-mediated defense mechanisms in the hyperthermophilic archaeal genus Sulfolobus
|
journal
|
February 2013 |
|
Type III CRISPR-Cas systems can provide redundancy to counteract viral escape from type I systems
|
journal
|
August 2017 |
|
Control of cyclic oligoadenylate synthesis in a type III CRISPR system
|
journal
|
July 2018 |
|
The dynamic interplay of host and viral enzymes in type III CRISPR-mediated cyclic nucleotide signalling
|
journal
|
April 2020 |
|
Tetramerisation of the CRISPR ring nuclease Crn3/Csx3 facilitates cyclic oligoadenylate cleavage
|
journal
|
June 2020 |