DOE PAGES title logo U.S. Department of Energy
Office of Scientific and Technical Information

Title: Perspective: Emerging strategies for determining atomic-resolution structures of macromolecular complexes within cells

Journal Article · · Journal of Structural Biology

Not Available

Research Organization:
Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States)
Sponsoring Organization:
National Institutes of Health (NIH); USDOE; USDOE Office of Science (SC), Biological and Environmental Research (BER)
Grant/Contract Number:
AC02-05CH11231
OSTI ID:
1836351
Journal Information:
Journal of Structural Biology, Journal Name: Journal of Structural Biology Journal Issue: 1 Vol. 214; ISSN 1047-8477
Publisher:
ElsevierCopyright Statement
Country of Publication:
United States
Language:
English

References (58)

Complex wavelets for extended depth-of-field: A new method for the fusion of multichannel microscopy images journal January 2004
Computer Visualization of Three-Dimensional Image Data Using IMOD journal January 1996
Dual-Axis Tomography: An Approach with Alignment Methods That Preserve Resolution journal December 1997
The advent of structural biology in situ by single particle cryo-electron tomography journal May 2017
Automated microscopy for electron tomography journal October 1992
Towards automatic electron tomography journal January 1992
Towards automatic electron tomography II. Implementation of autofocus and low-dose procedures journal February 1993
Limitations to significant information in biological electron microscopy as a result of radiation damage journal August 1971
Radiation Damage in Electron Cryomicroscopy book January 2010
Correction of high-resolution data for curvature of the Ewald sphere journal March 2000
Reaching the Information Limit in Cryo-EM of Biological Macromolecules: Experimental Aspects journal May 2011
From proteomic inventory to architecture journal November 2004
Single particle tomography in EMAN2 journal June 2015
Implementation of a cryo-electron tomography tilt-scheme optimized for high resolution subtomogram averaging journal February 2017
Protein Secondary Structure Determination by Constrained Single-Particle Cryo-Electron Tomography journal December 2012
Cryo-Electron Tomography: Can it Reveal the Molecular Sociology of Cells in Atomic Detail? journal November 2016
Image deconvolution in spherical aberration-corrected high-resolution transmission electron microscopy journal April 2006
Practical factors affecting the performance of a thin-film phase plate for transmission electron microscopy journal March 2009
Comparison of optimal performance at 300keV of three direct electron detectors for use in low dose electron microscopy journal December 2014
A multiple scattering algorithm for three dimensional phase contrast atomic electron tomography journal January 2020
Spectral DQE of the Volta phase plate journal November 2020
A new solution to the curved Ewald sphere problem for 3D image reconstruction in electron microscopy journal May 2021
The potential and limitations of neutrons, electrons and X-rays for atomic resolution microscopy of unstained biological molecules journal May 1995
Extended Depth of Field for High-Resolution Scanning Transmission Electron Microscopy journal December 2010
Optimized Deconvolution for Maximum Axial Resolution in Three-Dimensional Aberration-Corrected Scanning Transmission Electron Microscopy journal December 2011
Cryo-EM structure of SNAP-SNARE assembly in 20S particle journal April 2015
Snapshots of nuclear pore complexes in action captured by cryo-electron tomography journal September 2007
An atomic structure of human γ-secretase journal August 2015
Localized reconstruction of subunits from electron cryomicroscopy images of macromolecular complexes journal November 2015
Subnanometer-resolution structure determination in situ by hybrid subtomogram averaging - single particle cryo-EM journal July 2020
Beam image-shift accelerated data acquisition for near-atomic resolution single-particle cryo-electron tomography journal March 2021
Single-particle cryo-EM at atomic resolution journal October 2020
Atomic-resolution protein structure determination by cryo-EM journal October 2020
Highly accurate protein structure prediction with AlphaFold journal July 2021
Laser phase plate for transmission electron microscopy journal September 2019
In situ structure determination at nanometer resolution using TYGRESS journal November 2019
Multi-particle cryo-EM refinement with M visualizes ribosome-antibiotic complex at 3.5 Å in cells journal February 2021
Invited Review Article: Methods for imaging weak-phase objects in electron microscopy journal November 2013
High-power near-concentric Fabry–Perot cavity for phase contrast electron microscopy journal May 2021
Depth sectioning with the aberration-corrected scanning transmission electron microscope journal February 2006
Volta potential phase plate for in-focus phase contrast transmission electron microscopy journal October 2014
Identification of macromolecular complexes in cryoelectron tomograms of phantom cells journal October 2002
High-resolution structures of HIV-1 Gag cleavage mutants determine structural switch for virus maturation journal September 2018
Three-dimensional deconvolution processing for STEM cryotomography journal October 2020
Golgi Structure in Three Dimensions: Functional Insights from the Normal Rat Kidney Cell journal March 1999
The Reconstruction of a Three-Dimensional Structure from Projections and its Application to Electron Microscopy journal June 1970
Limits of Three-Dimensional Resolution and Dose for Aberration-Corrected Electron Tomography journal January 2021
Macromolecular Architecture in Eukaryotic Cells Visualized by Cryoelectron Tomography journal November 2002
Visualizing the molecular sociology at the HeLa cell nuclear periphery journal February 2016
An atomic model of HIV-1 capsid-SP1 reveals structures regulating assembly and maturation journal July 2016
Accurate prediction of protein structures and interactions using a three-track neural network journal July 2021
The Structure of Immature Virus-Like Rous Sarcoma Virus Gag Particles Reveals a Structural Role for the p10 Domain in Assembly journal July 2015
Optical Sectioning Microscopy: Cellular Architecture in Three Dimensions journal June 1984
Three-dimensional quantitative phase imaging via tomographic deconvolution phase microscopy journal January 2015
Three-dimensional imaging by a microscope journal January 1985
Direct Imaging of Phase Objects Enables Conventional Deconvolution in Bright Field Light Microscopy journal February 2014
Single-protein detection in crowded molecular environments in cryo-EM images journal May 2017
Locating macromolecular assemblies in cells by 2D template matching with cisTEM journal June 2021